RPSBLAST alignment of GI: 254780728 and protein with PDBid: 3frn
>3frn_A Flagellar protein FLGA; structural genomics, periplasmic, PSI-2, protein structure initiative; 2.05A {Thermotoga maritima} Length = 278
Score = 37.6 bits (87), Expect = 0.003
Identities = 21/151 (13%), Positives = 49/151 (32%), Gaps = 15/151 (9%)
Query: 33 QTEEVITENPAKFINVLISKGDLAVGMVVTPNILEWVAFPEENVFDGFIDDVHQPNAMQE 92
T + K NV++ K ++ VG V+ + ++ D + E
Sbjct: 130 DTYVTLNMLLRKERNVVVLKRNINVGDVIKEEDVRLEKRNVFEIYGEPFFD------VSE 183
Query: 93 LDGVLVRVPILKGDPIRLEKLVD--RGNGGLSSLLPKGKRAATMDISISSAVGGMIKPND 150
+ G + R + +G + + + D G + + + G +
Sbjct: 184 VVGKISRRYLKEGTVLTADMVKDPPDVVKGQVVPAYVDMGSIKVTTFVEVLENGYL---- 239
Query: 151 HVDVVMVRSLSERKPTVTVVLSN--IRVIAI 179
+ V ++ RK V +R++ +
Sbjct: 240 -GETVRAMNVESRKYVFGRVERGPVLRILEV 269