BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780732|ref|YP_003065145.1| hypothetical protein
CLIBASIA_03095 [Candidatus Liberibacter asiaticus str. psy62]
(58 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780732|ref|YP_003065145.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040409|gb|ACT57205.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 58
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/58 (100%), Positives = 58/58 (100%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS
Sbjct: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
>gi|254780733|ref|YP_003065146.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040410|gb|ACT57206.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 56
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/51 (86%), Positives = 48/51 (94%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADIS 51
MKM+IVK+FL+DESGATAIEYGLLASLIAVAIIASVTTLGGKL+ VF DI
Sbjct: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
>gi|254780734|ref|YP_003065147.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040411|gb|ACT57207.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str.
psy62]
Length = 62
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/50 (84%), Positives = 42/50 (84%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADI 50
MKMHIVKNFLQDESGATAIEYGLL SLIAV II SVTTLGGKL F I
Sbjct: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAI 50
>gi|315121897|ref|YP_004062386.1| hypothetical protein CKC_00735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495299|gb|ADR51898.1| hypothetical protein CKC_00735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 64
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 46/56 (82%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
MK++I++NFLQDESGATAIEYGLLA+L++V II +VTTLG KL+A FA + P
Sbjct: 1 MKINIIRNFLQDESGATAIEYGLLAALVSVVIIGAVTTLGTKLSATFAKVGESFLP 56
>gi|254780730|ref|YP_003065143.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040407|gb|ACT57203.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 120
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 47/55 (85%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
MKM+I+K L++ SGATAIEYGLLASL++VAII++V+TLG ++ V+ IS++L+
Sbjct: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
>gi|222084465|ref|YP_002542994.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221721913|gb|ACM25069.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ FL+DESGATAIEYGL+A+LI+VAIIA TTLG L+ F IS+K+N S
Sbjct: 4 LFSRFLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTFNGISTKMNTAS 57
>gi|222084466|ref|YP_002542995.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221721914|gb|ACM25070.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 40/54 (74%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ FL+DESGATAIEYGL+A+LI+VAIIA TTLG L+ F +S K+N S
Sbjct: 4 LFSRFLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTFNGVSDKMNTAS 57
>gi|161524909|ref|YP_001579921.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616]
gi|189350341|ref|YP_001945969.1| putative fimbriae assembly-related protein [Burkholderia
multivorans ATCC 17616]
gi|160342338|gb|ABX15424.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616]
gi|189334363|dbj|BAG43433.1| putative fimbriae assembly-related protein [Burkholderia
multivorans ATCC 17616]
Length = 69
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 43/54 (79%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I+K FL++E G TAIEYGL+A LIAVAIIASV+T+G KL +F +ISS ++ S
Sbjct: 4 IIKCFLKEEDGVTAIEYGLIAGLIAVAIIASVSTIGSKLGTMFENISSCVSSPS 57
>gi|83859354|ref|ZP_00952875.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii
HTCC2633]
gi|83852801|gb|EAP90654.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii
HTCC2633]
Length = 69
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 41/51 (80%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++V FL+DESGATAIEYGL+A+LIAV II +VTTLG L+ F ++ ++L
Sbjct: 3 NLVSRFLKDESGATAIEYGLIAALIAVVIITAVTTLGTNLSTTFTNVGTQL 53
>gi|254293211|ref|YP_003059234.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
gi|254041742|gb|ACT58537.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
Length = 59
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 41/51 (80%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++K F +DESGATAIEYGL+A+LI+VAII V+T+G K +A F +S KL
Sbjct: 3 NLMKKFFKDESGATAIEYGLIAALISVAIIGGVSTVGTKTSATFDAVSEKL 53
>gi|86355861|ref|YP_467753.1| component of type IV pilus, pilin subunit protein [Rhizobium etli
CFN 42]
gi|86279963|gb|ABC89026.1| component of type IV pilus, pilin subunit protein [Rhizobium etli
CFN 42]
Length = 91
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 41/51 (80%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ FL+DESGATAIEYGL+A+LI+VA+IA T+LGGK+ F ++S +++
Sbjct: 27 LFSRFLKDESGATAIEYGLIAALISVALIAGATSLGGKIGDTFNNLSDRMD 77
>gi|323136420|ref|ZP_08071502.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322398494|gb|EFY01014.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 37/49 (75%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+K F++DESGATAIEYGL+ASLI VAIIA V LG L+ FA +S L
Sbjct: 5 LKTFIRDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNL 53
>gi|241207154|ref|YP_002978250.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240861044|gb|ACS58711.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 62
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 41/52 (78%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ FL+DESGATAIEYGL+A+LI+VA+I T+LGGK+ VF +S+K++
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGGKIGNVFNGLSTKMD 54
>gi|288956966|ref|YP_003447307.1| Flp/Fap pilin component [Azospirillum sp. B510]
gi|288909274|dbj|BAI70763.1| Flp/Fap pilin component [Azospirillum sp. B510]
Length = 75
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 42/54 (77%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I++ +D+ GATAIEYGLLA+LIAVAII V+ +GG L ++F ISSK++ K+
Sbjct: 20 ILRRLRKDDRGATAIEYGLLAALIAVAIIGGVSAVGGNLNSMFNAISSKISAKT 73
>gi|134295591|ref|YP_001119326.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134138748|gb|ABO54491.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 91
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 38/48 (79%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
++K FL++E+G TAIEYGL+A L+AVAIIA V++LGG L +F I S
Sbjct: 24 LIKRFLKEETGVTAIEYGLIAGLVAVAIIAGVSSLGGNLNTMFTSIGS 71
>gi|315497469|ref|YP_004086273.1| flp/fap pilin component [Asticcacaulis excentricus CB 48]
gi|315415481|gb|ADU12122.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48]
Length = 57
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++KNF DESGATAIEYGL+A+LIAVA+I ++ LG L A F +S KL
Sbjct: 3 NLIKNFANDESGATAIEYGLIAALIAVALITTLGALGKNLDATFKGVSDKL 53
>gi|160897518|ref|YP_001563100.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
gi|160363102|gb|ABX34715.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
Length = 58
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++KNF +DE GATAIEYGL+A LIAV I+ T LG L +F +++KLN
Sbjct: 3 EMIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTDLNGLFNRLATKLN 54
>gi|160897519|ref|YP_001563101.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
gi|160363103|gb|ABX34716.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
Length = 68
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 36/51 (70%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
I+KNF +DE GATAIEYGL+A LIAV I+ T LG L +F I++KL
Sbjct: 13 DIIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTNLNGLFTRIATKL 63
>gi|296156486|ref|ZP_06839324.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
gi|295893085|gb|EFG72865.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
Length = 62
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ ++ FL++E G AIEYGLLA LIAVAIIA++TT+G KL VF + + LN
Sbjct: 3 NTIQQFLREEDGVAAIEYGLLAGLIAVAIIATITTVGSKLNNVFTYVQNALN 54
>gi|323137422|ref|ZP_08072500.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322397409|gb|EFX99932.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 36/50 (72%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
I F++DESGATAIEYGL+ASLI VAIIA V LG L+ FA +S L
Sbjct: 4 IFSRFVKDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNL 53
>gi|325291662|ref|YP_004277526.1| components of type IV pilus, pilin subunit [Agrobacterium sp.
H13-3]
gi|325059515|gb|ADY63206.1| components of type IV pilus, pilin subunit [Agrobacterium sp.
H13-3]
Length = 62
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I FL+DESGATAIEYGL+A+LI+VAII T +G +L A F +S ++N +
Sbjct: 4 IFTRFLKDESGATAIEYGLIAALISVAIIGGATAVGTRLNAFFTALSQRINANA 57
>gi|89899599|ref|YP_522070.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
gi|89344336|gb|ABD68539.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
Length = 58
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+H ++ F+++E G TAIEYGL+A+LIAV IIASVT +G +L VF +S L
Sbjct: 4 VHFIQKFVREEEGVTAIEYGLIAALIAVVIIASVTIVGTQLAVVFGKVSDAL 55
>gi|302381760|ref|YP_003817583.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302192388|gb|ADK99959.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 55
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 38/49 (77%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ F QDESGATAIEYGL+A+LIAV II ++TTLG K+T F +++ +
Sbjct: 5 ITKFAQDESGATAIEYGLIAALIAVVIIGAITTLGTKITGTFTKVANAM 53
>gi|224824209|ref|ZP_03697317.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
gi|224603628|gb|EEG09803.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
Length = 66
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+K F QDE G TAIEYGL+A+LIAV II SV +G +L+ VF +I++ LN
Sbjct: 14 LKQFTQDEEGVTAIEYGLIAALIAVVIITSVQAVGNQLSLVFNNIATALN 63
>gi|218680428|ref|ZP_03528325.1| Flp/Fap pilin component [Rhizobium etli CIAT 894]
Length = 62
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ FL+DESGATAIEYGL+A+LI+VA+I T+LGGK+ F +S+K++
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGGKIGNTFNGLSTKMD 54
>gi|325525573|gb|EGD03363.1| Flp/Fap pilin component [Burkholderia sp. TJI49]
Length = 60
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 39/50 (78%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
V+ F++DE G TAIEYGL+A+LIAV IIA+++T+G L VF+ I+ LN
Sbjct: 8 VRRFVRDEDGVTAIEYGLIAALIAVGIIAALSTIGTDLKTVFSTIADDLN 57
>gi|221066742|ref|ZP_03542847.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
gi|220711765|gb|EED67133.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
Length = 61
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ +K F +DE GATAIEYGL+A L+AV II ++T+LG +L+A+F +S KL
Sbjct: 3 NFIKTFCKDEKGATAIEYGLIAGLVAVGIIFALTSLGTELSALFDRVSEKLK 54
>gi|170701748|ref|ZP_02892684.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133331|gb|EDT01723.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 54
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 40/50 (80%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++K FL++E G TAIEYGL+A LIA II SVTT+G K++A+F+ I+S L
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKISALFSTIASSL 53
>gi|171317109|ref|ZP_02906312.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
gi|171097743|gb|EDT42570.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
Length = 68
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 41/54 (75%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++K FL++E G TAIEYGL+A LIAVAI+A VT++GG L +F ++ + + ++
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAVAIVAGVTSIGGSLGTMFTNLGTCVTTRT 57
>gi|222147186|ref|YP_002548143.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
gi|221734176|gb|ACM35139.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
Length = 61
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 40/51 (78%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
I F++DESGATAIEYGL+A+LI+VA++A T+LG L F ++++++N
Sbjct: 4 IFARFMKDESGATAIEYGLIAALISVALVAGATSLGSSLNNTFTNLTTQMN 54
>gi|116249978|ref|YP_765816.1| pilus subunit protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115254626|emb|CAK05700.1| putative pilus subunit protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 61
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+ FL+DESGATAIEYGL+A+LI+VA+I TTLG ++ F ++ +K+N
Sbjct: 4 LFSRFLKDESGATAIEYGLIAALISVALITGATTLGDRIGTTFNNLGTKMNT 55
>gi|85859143|ref|YP_461345.1| flp/Fap pilin component [Syntrophus aciditrophicus SB]
gi|85722234|gb|ABC77177.1| flp/fap pilin component [Syntrophus aciditrophicus SB]
Length = 56
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
M ++K FL+DE G TAIEYGL+A+LIAV II +VT +G L F +++ +L
Sbjct: 1 MELIKRFLKDEEGVTAIEYGLIAALIAVVIIGAVTLVGKGLDGTFREVAGELGE 54
>gi|209551756|ref|YP_002283673.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537512|gb|ACI57447.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 61
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ FL+DESGATAIEYGL+A+LI+VA+I T LGGK+ F +S+K++
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATALGGKIGNTFNGLSTKMD 54
>gi|90423865|ref|YP_532235.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90105879|gb|ABD87916.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 60
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+IV FL+DESGATAIEYGL+ASLIA+AII ++TT+G L+ ++ + L
Sbjct: 3 NIVMKFLKDESGATAIEYGLIASLIALAIITALTTIGSNLSTKLGEVGAAL 53
>gi|115351452|ref|YP_773291.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115281440|gb|ABI86957.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 54
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++K FL++E G TAIEYGL+A LIA II SVTT+G K+ A+F+ I+S L
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKIAALFSTIASSL 53
>gi|221213143|ref|ZP_03586119.1| Flp/Fap pilin component [Burkholderia multivorans CGD1]
gi|221167356|gb|EED99826.1| Flp/Fap pilin component [Burkholderia multivorans CGD1]
Length = 73
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 41/54 (75%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I+K FL++E+G TAIEYGL+A LIAVAI+A V+++GG L +F ++ S + S
Sbjct: 4 IIKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFKNLGSCITDPS 57
>gi|218461609|ref|ZP_03501700.1| pilus subunit protein [Rhizobium etli Kim 5]
Length = 61
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ FL+DESGATAIEYGL+A+LI+VA+I T+LG K+ VF +S+K++
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGTKIGNVFTGLSTKMD 54
>gi|159184218|ref|NP_353257.2| components of type IV pilus, pilin subunit [Agrobacterium
tumefaciens str. C58]
gi|159139547|gb|AAK86042.2| components of type IV pilus, pilin subunit [Agrobacterium
tumefaciens str. C58]
Length = 63
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 34/44 (77%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVF 47
I FL+DESGATAIEYGL+A+LI+VAII +TLGGKL F
Sbjct: 3 KIFARFLKDESGATAIEYGLIAALISVAIIGGASTLGGKLKDTF 46
>gi|51245391|ref|YP_065275.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila
LSv54]
gi|50876428|emb|CAG36268.1| related to pilus assembly protein pilin subunit [Desulfotalea
psychrophila LSv54]
Length = 61
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++++ F++DESG TAIEY L+ASLIA+ IIA+VT +GG L F I++ L
Sbjct: 5 LNMIQTFVKDESGVTAIEYALIASLIAIGIIAAVTIIGGVLNTTFQRIATAL 56
>gi|220922776|ref|YP_002498078.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947383|gb|ACL57775.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 56
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 39/50 (78%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++K F +DESGATAIEYGLLA+LIAVA+I + ++GG L ++F ++ L
Sbjct: 4 MLKRFAKDESGATAIEYGLLATLIAVALITAAKSVGGNLNSMFTKVAGNL 53
>gi|222147185|ref|YP_002548142.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
gi|221734175|gb|ACM35138.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
Length = 61
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 40/53 (75%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
I F++DESGATAIEYGL+A+LI+VA++A TTLG + F ++++++N
Sbjct: 3 KIFSRFMKDESGATAIEYGLIAALISVALVAGATTLGTSIGNTFNNLTTQMNK 55
>gi|218665735|ref|YP_002427087.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218517948|gb|ACK78534.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 79
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
H V F+++E G TAIEYGL+A LIAVAII SV LG KL ++F+ I+ +L
Sbjct: 26 HAVARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQLK 77
>gi|163757622|ref|ZP_02164711.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
gi|162285124|gb|EDQ35406.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
Length = 63
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
I F++DESGATAIEYGL+A+LI+VA+I TTLG L F+ +++KL+
Sbjct: 9 IFDRFVKDESGATAIEYGLIAALISVALITGATTLGNSLNNQFSGLATKLD 59
>gi|27376661|ref|NP_768190.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
gi|27349802|dbj|BAC46815.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
Length = 53
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 39/52 (75%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M + +FL+DESGATAIEYGL+A+ I++AIIA V LG KL FA ISS L
Sbjct: 1 MKTLVHFLRDESGATAIEYGLIAAGISLAIIAVVNGLGTKLNTKFASISSSL 52
>gi|302381759|ref|YP_003817582.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302192387|gb|ADK99958.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 55
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ F DESGATAIEYGL+A+LIAV II ++T LG K+T F +S+ +
Sbjct: 5 ITKFAHDESGATAIEYGLIAALIAVVIIGAITVLGEKITGTFTKVSTAM 53
>gi|218506996|ref|ZP_03504874.1| pilus subunit protein [Rhizobium etli Brasil 5]
Length = 92
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ FL+DESGATAIEYGL+A+LI+VA+I T+LG K+ F +S+K++
Sbjct: 4 LFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLSTKMD 54
>gi|198284419|ref|YP_002220740.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC
53993]
gi|198248940|gb|ACH84533.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 69
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
H V F+++E G TAIEYGL+A LIAVAII SV LG KL ++F+ I+ +L
Sbjct: 6 HAVARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQLK 57
>gi|94309597|ref|YP_582807.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353449|gb|ABF07538.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Query: 1 MKMHIV--KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M H V K FL+D+ G TAIEYGL+A+LIAV IIASV +G L+++F I+S+L+
Sbjct: 1 MSNHFVSLKAFLRDDDGVTAIEYGLIAALIAVVIIASVQLVGTNLSSIFNTIASELS 57
>gi|134291862|ref|YP_001115631.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134135051|gb|ABO59376.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 60
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
V+ F+QDE G TAIEYGL+A+LIAV ++A++T +G L VF I+ LN
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVGLVAALTLVGNDLKTVFNTIADDLNA 58
>gi|221197777|ref|ZP_03570823.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M]
gi|221204665|ref|ZP_03577682.1| Flp/Fap pilin component [Burkholderia multivorans CGD2]
gi|221175522|gb|EEE07952.1| Flp/Fap pilin component [Burkholderia multivorans CGD2]
gi|221181709|gb|EEE14110.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M]
Length = 72
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 38/46 (82%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADI 50
I+K FL++E+G TAIEYGL+A LIAVAI+A V+++GG L +F ++
Sbjct: 4 IIKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFNNL 49
>gi|170701158|ref|ZP_02892131.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133939|gb|EDT02294.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 60
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
V+ F+QDE G TAIEYGL+A+LIAV ++A++T +G L VF I+ LN
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLNA 58
>gi|115361028|ref|YP_778165.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115286356|gb|ABI91831.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 60
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
V+ F+QDE G TAIEYGL+A+LIAV ++A++T +G L VF I+ LN
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLNA 58
>gi|190889878|ref|YP_001976420.1| pilus subunit protein [Rhizobium etli CIAT 652]
gi|190695157|gb|ACE89242.1| pilus subunit protein [Rhizobium etli CIAT 652]
gi|327194697|gb|EGE61543.1| pilus subunit protein [Rhizobium etli CNPAF512]
Length = 61
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ FL+DESGATAIEYGL+A+LI+VA+I T+LG K+ F +S+K++
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLSTKMD 54
>gi|187479019|ref|YP_787043.1| pilin subunit [Bordetella avium 197N]
gi|115423605|emb|CAJ50144.1| putative pilin subunit [Bordetella avium 197N]
Length = 71
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
F +DE GATAIEYGL+A LIAV IIA +T LGG L +F I++ L
Sbjct: 8 FWRDEDGATAIEYGLIAGLIAVVIIAGLTALGGGLNGLFTRINNAL 53
>gi|51245390|ref|YP_065274.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila
LSv54]
gi|50876427|emb|CAG36267.1| related to pilus assembly protein pilin subunit [Desulfotalea
psychrophila LSv54]
Length = 59
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ +++ F++DESG TAIEYGL+A+LIAV IIA+VT +G L F I++ L
Sbjct: 5 LSMIRTFVKDESGVTAIEYGLIAALIAVVIIAAVTAVGVALNTTFQRIATALE 57
>gi|187927693|ref|YP_001898180.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724583|gb|ACD25748.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 55
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ +K F +DE G TAIEYGL+A+LIAV IIASV +G L+ VF++I++ L
Sbjct: 4 LNALKQFARDEDGVTAIEYGLIAALIAVVIIASVKLVGQNLSTVFSNIAAAL 55
>gi|172065268|ref|YP_001815980.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171997510|gb|ACB68427.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 60
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
V+ F+QDE G TAIEYGL+A+LIAV ++A++T +G L VF I+ LN
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVTLVAALTLVGKDLNDVFNTIADDLN 57
>gi|220924565|ref|YP_002499867.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219949172|gb|ACL59564.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+VK F+ DESGATAIEYGLLA+LIAVA+I + +++G L+++F I+ L
Sbjct: 1 MVKRFIVDESGATAIEYGLLATLIAVALITAASSVGTNLSSLFNKIAGNL 50
>gi|39936737|ref|NP_949013.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|192292563|ref|YP_001993168.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|39650593|emb|CAE29116.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
gi|192286312|gb|ACF02693.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 54
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+IV F++DESGATAIEYGL+A+ I++AIIA+V L GKL + F + + L
Sbjct: 3 NIVARFIKDESGATAIEYGLIAAGISLAIIAAVQGLAGKLNSTFTSVQNAL 53
>gi|46204006|ref|ZP_00209209.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 68
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+I K F+ DESGATAIEYGL+A+++ +A++A G KLT F + + LN ++
Sbjct: 7 NIAKRFIADESGATAIEYGLVAAMMGIAVVAVFKAFGSKLTTAFETLGTSLNTQT 61
>gi|315121896|ref|YP_004062385.1| hypothetical protein CKC_00730 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495298|gb|ADR51897.1| hypothetical protein CKC_00730 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 60
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 47/55 (85%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M+++I++ FLQDESGATAIEYGLLA+L+AVAIIASVTTLG KL+A F + L+
Sbjct: 1 MRINIIRKFLQDESGATAIEYGLLAALVAVAIIASVTTLGTKLSATFKRVGDSLS 55
>gi|172060491|ref|YP_001808143.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171993008|gb|ACB63927.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 72
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 40/54 (74%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++K FL++E G TAIEYGL+A LIAVAIIA +T+G L++ F+ I + ++ S
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAVAIIAGASTVGSNLSSTFSKIGTCVSSPS 57
>gi|220923697|ref|YP_002498999.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219948304|gb|ACL58696.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 54
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F++DESGATAIEYGL+A LIAV II +VTT+G +L F I + L
Sbjct: 3 NLFTRFVKDESGATAIEYGLIAGLIAVVIITAVTTIGTRLNTKFTAIGTALQ 54
>gi|33593020|ref|NP_880664.1| hypothetical protein BP1991 [Bordetella pertussis Tohama I]
gi|33563395|emb|CAE42271.1| putative membrane protein [Bordetella pertussis Tohama I]
gi|332382432|gb|AEE67279.1| hypothetical protein BPTD_1961 [Bordetella pertussis CS]
Length = 58
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+KNF +DE GATAIEYGL+ LIAV II SV+ LG L F I ++L+ ++
Sbjct: 5 LKNFWRDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELSAEA 57
>gi|73542324|ref|YP_296844.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72119737|gb|AAZ62000.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 61
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++K F++DE G TAIEYGL+A+LIAV IIASV +G +L + F+ I + L
Sbjct: 7 MLKQFIRDEEGVTAIEYGLIAALIAVVIIASVAIVGTQLNSTFSKIGTSLTS 58
>gi|254255251|ref|ZP_04948567.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158]
gi|124900988|gb|EAY71738.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158]
Length = 112
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
V+ F++DE G TAIEYGL+A+LIAV II +++T+G L VF+ I++ L+
Sbjct: 57 VRRFVRDEEGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLD 106
>gi|222087312|ref|YP_002545849.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221724760|gb|ACM27916.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M V+ F D +GAT +EYGL+A+L++VAI++ + GG LT VF +S+ LN
Sbjct: 1 MRSVRRFFNDRTGATVVEYGLIAALMSVAIVSGLGAFGGSLTNVFNLVSNTLN 53
>gi|94309598|ref|YP_582808.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353450|gb|ABF07539.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 38/49 (77%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+K F++DE G TAIEYGL+A+LIAV IIASV +G L+ VF+ I+ +L
Sbjct: 8 LKRFVRDEDGVTAIEYGLIAALIAVVIIASVQLVGQNLSKVFSLIAGEL 56
>gi|15963891|ref|NP_384244.1| putative pilin subunit protein [Sinorhizobium meliloti 1021]
gi|307315788|ref|ZP_07595302.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307320423|ref|ZP_07599840.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|15073066|emb|CAC41525.1| Putative pilin subunit [Sinorhizobium meliloti 1021]
gi|306893989|gb|EFN24758.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306898556|gb|EFN29229.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 60
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
I ++DESGATAIEYGL+A+LI+VA+I TLGG L+ F ++ LN
Sbjct: 4 IFARLMKDESGATAIEYGLIAALISVALIGGAQTLGGALSTQFTNLGGYLN 54
>gi|254502369|ref|ZP_05114520.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11]
gi|222438440|gb|EEE45119.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11]
Length = 58
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ F +DESGATAIEYGL+A L++VAII + T+G LT++F+ I S L S
Sbjct: 4 LFSRFAKDESGATAIEYGLIAGLLSVAIIGILVTMGDSLTSIFSQIDSALKTGS 57
>gi|33596964|ref|NP_884607.1| hypothetical protein BPP2371 [Bordetella parapertussis 12822]
gi|33600806|ref|NP_888366.1| hypothetical protein BB1821 [Bordetella bronchiseptica RB50]
gi|33566415|emb|CAE37668.1| putative membrane protein [Bordetella parapertussis]
gi|33568406|emb|CAE32318.1| putative membrane protein [Bordetella bronchiseptica RB50]
Length = 58
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+KNF DE GATAIEYGL+ LIAV II SV+ LG L F I ++L+ ++
Sbjct: 5 LKNFWHDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELSAEA 57
>gi|307943139|ref|ZP_07658484.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773935|gb|EFO33151.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 60
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++ F +DESGATAIEYGL+A LI++ II VT +G L ++F ISS L
Sbjct: 3 NVISRFAKDESGATAIEYGLIAGLISITIIGVVTAVGTNLNSLFTTISSTL 53
>gi|167584952|ref|ZP_02377340.1| hypothetical protein BuboB_06426 [Burkholderia ubonensis Bu]
Length = 70
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
NFL+D+SG TAIEYGL+A+LIAV II +V +G L VF I ++L
Sbjct: 24 NFLRDDSGVTAIEYGLIAALIAVVIIGAVQIVGQDLNGVFTTIGNEL 70
>gi|186474099|ref|YP_001861441.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
gi|184196431|gb|ACC74395.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
Length = 58
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ FL +E G +AIEYGLLA LIAVAII +V +GG L +VF I +KL
Sbjct: 5 IQQFLGEEDGVSAIEYGLLAGLIAVAIITTVGLVGGSLNSVFNTIQTKL 53
>gi|295690802|ref|YP_003594495.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756]
gi|295432705|gb|ADG11877.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756]
Length = 59
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 33/44 (75%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVF 47
V FL+DESGATAIEYGL+ +LIAV I+ +VTTLG KL F
Sbjct: 3 KFVTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTKLGTAF 46
>gi|17549313|ref|NP_522653.1| putative pilin protein [Ralstonia solanacearum GMI1000]
gi|17431565|emb|CAD18243.1| putative pilin protein [Ralstonia solanacearum GMI1000]
Length = 58
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
H + FL+DE GATAIEYGLLA LIA I +VTTLG ++ F ++ + +
Sbjct: 3 HAILQFLRDEQGATAIEYGLLAGLIAAVIAGTVTTLGTEIKTAFGNVCTAIK 54
>gi|170740624|ref|YP_001769279.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
gi|168194898|gb|ACA16845.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
Length = 54
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++K F +DESGATAIEYGLLA+LIAVA+I + ++G L ++F ++ L
Sbjct: 4 MLKRFAKDESGATAIEYGLLATLIAVALITAAQSVGSNLNSMFQKVAGNL 53
>gi|110636419|ref|YP_676627.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1]
gi|110287403|gb|ABG65462.1| Flp/Fap pilin component [Chelativorans sp. BNC1]
Length = 60
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
FL+DESGATA+EYGL+ +LIA IIA V ++GG++T F +S+ L +
Sbjct: 7 RFLKDESGATAVEYGLIVALIAAGIIAVVGSIGGQITNAFTRVSTGLTGE 56
>gi|27379923|ref|NP_771452.1| fimbriae associated protein [Bradyrhizobium japonicum USDA 110]
gi|27353076|dbj|BAC50077.1| bsl4812 [Bradyrhizobium japonicum USDA 110]
Length = 69
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ +KNFL DE GATAIEYGL+A+ IA+A+I V +G KL F IS+ L
Sbjct: 18 NTLKNFLADERGATAIEYGLIAAGIALAVITVVNGMGSKLNTKFGSISTSL 68
>gi|197103822|ref|YP_002129199.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1]
gi|196477242|gb|ACG76770.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1]
Length = 58
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
V FL+DESGATAIEYGL+A+LIAV ++ ++ +G L F DIS+K++
Sbjct: 3 KFVTRFLKDESGATAIEYGLIAALIAVVLVGALQLVGTSLDTKFRDISTKVS 54
>gi|167587320|ref|ZP_02379708.1| Flp/Fap pilin component [Burkholderia ubonensis Bu]
Length = 58
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
MK +++ FL++E G TAIEYGL+A LIAVAI+ SVT +G +L VF +I ++L
Sbjct: 1 MKAMMIR-FLKEEDGVTAIEYGLIAGLIAVAIMTSVTDIGTRLGLVFTNIYNQL 53
>gi|167648155|ref|YP_001685818.1| Flp/Fap pilin component [Caulobacter sp. K31]
gi|167350585|gb|ABZ73320.1| Flp/Fap pilin component [Caulobacter sp. K31]
Length = 61
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 33/49 (67%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
V FL DESGATAIEYGL+ +LIAV I VTTLGG L F ++ +
Sbjct: 5 VTRFLNDESGATAIEYGLIVALIAVVIATVVTTLGGSLKTTFKNVDDSV 53
>gi|76811746|ref|YP_333336.1| putative fimbriae assembly-like protein [Burkholderia
pseudomallei 1710b]
gi|126441443|ref|YP_001058803.1| pilin family protein [Burkholderia pseudomallei 668]
gi|126452952|ref|YP_001066054.1| pilin family protein [Burkholderia pseudomallei 1106a]
gi|134282265|ref|ZP_01768970.1| pilin, flp/fap family [Burkholderia pseudomallei 305]
gi|167719791|ref|ZP_02403027.1| pilin, flp/fap family protein [Burkholderia pseudomallei DM98]
gi|167738792|ref|ZP_02411566.1| pilin, flp/fap family protein [Burkholderia pseudomallei 14]
gi|167824391|ref|ZP_02455862.1| pilin, flp/fap family protein [Burkholderia pseudomallei 9]
gi|167845922|ref|ZP_02471430.1| pilin, flp/fap family protein [Burkholderia pseudomallei B7210]
gi|167894498|ref|ZP_02481900.1| pilin, flp/fap family protein [Burkholderia pseudomallei 7894]
gi|167902903|ref|ZP_02490108.1| pilin, flp/fap family protein [Burkholderia pseudomallei NCTC
13177]
gi|167911141|ref|ZP_02498232.1| pilin, flp/fap family protein [Burkholderia pseudomallei 112]
gi|217423683|ref|ZP_03455184.1| pilin, flp/fap family [Burkholderia pseudomallei 576]
gi|226199682|ref|ZP_03795235.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9]
gi|237812063|ref|YP_002896514.1| hypothetical protein GBP346_A1805 [Burkholderia pseudomallei
MSHR346]
gi|242317113|ref|ZP_04816129.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b]
gi|254179961|ref|ZP_04886560.1| pilin, flp/fap family [Burkholderia pseudomallei 1655]
gi|254188629|ref|ZP_04895140.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237]
gi|254197897|ref|ZP_04904319.1| pilin, flp/fap family [Burkholderia pseudomallei S13]
gi|254259877|ref|ZP_04950931.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a]
gi|254297797|ref|ZP_04965250.1| pilin, flp/fap family [Burkholderia pseudomallei 406e]
gi|76581199|gb|ABA50674.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei 1710b]
gi|126220936|gb|ABN84442.1| pilin, flp/fap family [Burkholderia pseudomallei 668]
gi|126226594|gb|ABN90134.1| pilin, flp/fap family [Burkholderia pseudomallei 1106a]
gi|134246303|gb|EBA46392.1| pilin, flp/fap family [Burkholderia pseudomallei 305]
gi|157806937|gb|EDO84107.1| pilin, flp/fap family [Burkholderia pseudomallei 406e]
gi|157936308|gb|EDO91978.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237]
gi|169654638|gb|EDS87331.1| pilin, flp/fap family [Burkholderia pseudomallei S13]
gi|184210501|gb|EDU07544.1| pilin, flp/fap family [Burkholderia pseudomallei 1655]
gi|217393541|gb|EEC33562.1| pilin, flp/fap family [Burkholderia pseudomallei 576]
gi|225928268|gb|EEH24302.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9]
gi|237504579|gb|ACQ96897.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242140352|gb|EES26754.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b]
gi|254218566|gb|EET07950.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a]
Length = 65
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ F ++E+G TAIEYGL+A LIAVAI +V T+G L+A+F+ I+SKL
Sbjct: 12 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKL 62
>gi|187927692|ref|YP_001898179.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724582|gb|ACD25747.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 56
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++ FL DE TAIEYGL+A+LIAV IIASV +G L+ VF++I++ L
Sbjct: 7 LLQQFLYDEQAVTAIEYGLIAALIAVVIIASVQLVGTNLSTVFSNIAAAL 56
>gi|83747921|ref|ZP_00944953.1| putative pilin protein [Ralstonia solanacearum UW551]
gi|207724793|ref|YP_002255190.1| pilin protein [Ralstonia solanacearum MolK2]
gi|207739462|ref|YP_002257855.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|83725454|gb|EAP72600.1| putative pilin protein [Ralstonia solanacearum UW551]
gi|206590018|emb|CAQ36979.1| pilin protein [Ralstonia solanacearum MolK2]
gi|206592838|emb|CAQ59744.1| pilin protein [Ralstonia solanacearum IPO1609]
Length = 58
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
H + FL+DE GATAIEYGL+A LIA I +VTTLG ++ F ++ S +
Sbjct: 3 HAILKFLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCSAIK 54
>gi|254473429|ref|ZP_05086826.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp.
JE062]
gi|211957545|gb|EEA92748.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp.
JE062]
Length = 55
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
FL+DESGATAIEYG+LA+L+AV +IA+V LG K+ +F IS+ +
Sbjct: 4 KFLKDESGATAIEYGILAALMAVIVIAAVPLLGDKIVTLFKGISTSFS 51
>gi|146342483|ref|YP_001207531.1| putative Flp/Fap pilin component (modular protein)
[Bradyrhizobium sp. ORS278]
gi|146195289|emb|CAL79314.1| Putative Flp/Fap pilin component (modular protein)
[Bradyrhizobium sp. ORS278]
Length = 54
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
MK ++K FL+DESGATAIEYGL+A+ I++AIIA+V LG L++ F I+S L
Sbjct: 1 MKTFVLK-FLRDESGATAIEYGLIAAGISLAIIAAVNGLGTSLSSKFDSINSSL 53
>gi|113866749|ref|YP_725238.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
gi|113525525|emb|CAJ91870.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
Length = 62
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++K F++DE G TAIEYGL+A+LIAV II SVT +G L +F I L
Sbjct: 7 MIKQFIRDEDGVTAIEYGLIAALIAVVIIVSVTLIGTNLNLIFKYIGDTL 56
>gi|188581657|ref|YP_001925102.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
gi|179345155|gb|ACB80567.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
Length = 64
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+I K F+ DESGATAIEYG++A+++ VAI+ T G KL F + + LN ++
Sbjct: 3 NIAKRFIADESGATAIEYGMVAAMVGVAIVGIFTQFGSKLKDAFTTLGTGLNTQT 57
>gi|186474098|ref|YP_001861440.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
gi|184196430|gb|ACC74394.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
Length = 58
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+K FL++E G +AIEYGLLA LI+VAII +V +G L VF+ I +KL
Sbjct: 5 IKQFLREEDGVSAIEYGLLAGLISVAIITTVGLIGTNLNTVFSTIQTKL 53
>gi|206559890|ref|YP_002230654.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|198035931|emb|CAR51823.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 56
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I+K FL++E G TA+EYGL+A LIAVA++++++TL G ++ F I+++L PK+
Sbjct: 4 IIKRFLKEEDGVTAVEYGLIAGLIAVALVSAMSTLTGGISGAFTYIANQL-PKA 56
>gi|53719513|ref|YP_108499.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei K96243]
gi|167816015|ref|ZP_02447695.1| pilin, flp/fap family protein [Burkholderia pseudomallei 91]
gi|167919164|ref|ZP_02506255.1| pilin, flp/fap family protein [Burkholderia pseudomallei BCC215]
gi|52209927|emb|CAH35899.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei K96243]
Length = 56
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ F ++E+G TAIEYGL+A LIAVAI +V T+G L+A+F+ I+SKL
Sbjct: 3 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKL 53
>gi|56477533|ref|YP_159122.1| Flp/Fap pilin component [Aromatoleum aromaticum EbN1]
gi|56313576|emb|CAI08221.1| INTERPRO: probable Flp/Fap pilin component [Aromatoleum
aromaticum EbN1]
Length = 56
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ ++K F++D+ G TAIEYGLLASLIA+AII LG KL +F I+ KL
Sbjct: 2 LEMMKQFVRDDEGVTAIEYGLLASLIALAIIVGAGALGTKLNTMFNFIAGKL 53
>gi|152983319|ref|YP_001355010.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille]
gi|151283396|gb|ABR91806.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille]
Length = 59
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
MK I++ F++DE GATAIEYGL+ LI+V I SV +GG L +F +IS+ L
Sbjct: 1 MKNQIIR-FMKDEEGATAIEYGLIVGLISVVIAVSVGLIGGNLQTLFTNISNAL 53
>gi|16127178|ref|NP_421742.1| pilus subunit protein PilA [Caulobacter crescentus CB15]
gi|221235979|ref|YP_002518416.1| type IV pilin protein pilA [Caulobacter crescentus NA1000]
gi|7208422|gb|AAF40189.1|AF229646_1 PilA [Caulobacter crescentus CB15]
gi|13424576|gb|AAK24910.1| pilus subunit protein PilA [Caulobacter crescentus CB15]
gi|220965152|gb|ACL96508.1| type IV pilin protein pilA [Caulobacter crescentus NA1000]
Length = 59
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVF 47
V FL+DESGATAIEYGL+ +LIAV I+ +VTTLG L F
Sbjct: 5 VTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTNLRTAF 46
>gi|220913388|ref|YP_002488697.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860266|gb|ACL40608.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 70
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+K+ E GATA+EYG++ LIAV II +V+TLGG L F I+++L PK+
Sbjct: 15 LKDRFSSEKGATAVEYGIMVGLIAVVIIVAVSTLGGTLDGFFDSINTELAPKT 67
>gi|329847249|ref|ZP_08262277.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
gi|328842312|gb|EGF91881.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
Length = 59
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 35/48 (72%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
F +DESGATAIEYGL+A+LIAVA+I+ + TL G LT F +S L
Sbjct: 6 NRFAKDESGATAIEYGLIAALIAVALISILGTLSGSLTGTFQRVSDDL 53
>gi|323529418|ref|YP_004231570.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323386420|gb|ADX58510.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
K F++DE G TAIEYGL+A+LIA+ II VT++G L A F I+SKL
Sbjct: 9 KAFVRDEDGVTAIEYGLIATLIALVIITGVTSVGTNLAAKFVLIASKLQ 57
>gi|300697746|ref|YP_003748407.1| Flp/Fap pilin component [Ralstonia solanacearum CFBP2957]
gi|299074470|emb|CBJ54020.1| putative Flp/Fap pilin component [Ralstonia solanacearum
CFBP2957]
Length = 58
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
H + FL+DE GATAIEYGL+A LIA I +VTTLG ++ F ++ + +
Sbjct: 3 HAILKFLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCTAIK 54
>gi|254293165|ref|YP_003059188.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
gi|254041696|gb|ACT58491.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
Length = 67
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+++ F D+SGATAIEYGL+ASLIAVAII SV +G + + F ++S+K +
Sbjct: 9 LLQKFCADKSGATAIEYGLIASLIAVAIITSVEVVGTENSKNFDNVSTKWDE 60
>gi|83721334|ref|YP_443063.1| pilin [Burkholderia thailandensis E264]
gi|167582067|ref|ZP_02374941.1| pilin, putative [Burkholderia thailandensis TXDOH]
gi|167620228|ref|ZP_02388859.1| pilin, putative [Burkholderia thailandensis Bt4]
gi|167836799|ref|ZP_02463682.1| pilin, putative [Burkholderia thailandensis MSMB43]
gi|257139293|ref|ZP_05587555.1| pilin, putative [Burkholderia thailandensis E264]
gi|83655159|gb|ABC39222.1| pilin, putative [Burkholderia thailandensis E264]
Length = 65
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ F ++E+G TAIEYGL+A LIAVAI +V T+G L+++F+ I+SKL
Sbjct: 12 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSSLFSTIASKL 62
>gi|239905276|ref|YP_002952015.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905277|ref|YP_002952016.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905278|ref|YP_002952017.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905279|ref|YP_002952018.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905280|ref|YP_002952019.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795140|dbj|BAH74129.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795141|dbj|BAH74130.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795142|dbj|BAH74131.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795143|dbj|BAH74132.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795144|dbj|BAH74133.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
Length = 55
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 36/49 (73%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ F++DE GATA+EYGL+A+LIA II +VT++G LT F +++ L
Sbjct: 5 ITQFIRDEEGATAVEYGLMAALIAAVIITAVTSIGTNLTTTFNTVATSL 53
>gi|299132284|ref|ZP_07025479.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
gi|298592421|gb|EFI52621.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
Length = 56
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+++ F++DESGATAIEY L+A+ I+V II +V TLG L VF I+ KL +
Sbjct: 3 NLLARFVKDESGATAIEYALIAAGISVVIIGAVQTLGSTLNGVFTTINGKLTAQ 56
>gi|78060320|ref|YP_366895.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964870|gb|ABB06251.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 63
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ F+QD+ G TAIEYGL+A+LIA+ I+ ++TT+G L VF+ I++ L+
Sbjct: 8 IAWFVQDQDGVTAIEYGLIAALIAIGIVVALTTIGTDLKTVFSTIAADLD 57
>gi|167584951|ref|ZP_02377339.1| hypothetical protein BuboB_06421 [Burkholderia ubonensis Bu]
Length = 56
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+K F++DE G TAIEYGL+A+LIAV II +V +G L VF I ++L
Sbjct: 8 LKQFVRDEDGVTAIEYGLIAALIAVVIIGAVRIVGQDLNGVFTTIGNEL 56
>gi|167570110|ref|ZP_02362984.1| pilin, putative [Burkholderia oklahomensis C6786]
Length = 65
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ FL +E+G TAIEYGL+A LIAVAI +V TLG L+ +F+ I+ KL
Sbjct: 12 QLMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFSTIAGKL 62
>gi|114568967|ref|YP_755647.1| Flp/Fap pilin component [Maricaulis maris MCS10]
gi|114339429|gb|ABI64709.1| Flp/Fap pilin component [Maricaulis maris MCS10]
Length = 52
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M ++ F +DESGATAIEYGL+A+LIAV II +VT LG ++ F ++ L
Sbjct: 1 MKMISRFFKDESGATAIEYGLIAALIAVVIIGAVTALGTGVSDNFNTVAGAL 52
>gi|303247319|ref|ZP_07333592.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
gi|302491233|gb|EFL51122.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
Length = 56
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ + NF+++E GATA+EYGL+A+LIA I+ VTTLG L+ F I++ +
Sbjct: 2 LRAITNFVRNEEGATAVEYGLMAALIAAVIVTVVTTLGQNLSTTFDSIATSI 53
>gi|307726370|ref|YP_003909583.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307586895|gb|ADN60292.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 57
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 35/48 (72%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
K F++DE G TAIEYGL+A+LIA+ II VT +G L A F IS+KL
Sbjct: 9 KAFIRDEDGVTAIEYGLIATLIALVIITGVTAVGTNLAAKFLFISTKL 56
>gi|150398538|ref|YP_001329005.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419]
gi|150030053|gb|ABR62170.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 61
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
I ++DESGATAIEYGL+A+LI+VA+I TLGG L F ++S+ L+
Sbjct: 4 IFTRLMKDESGATAIEYGLIAALISVALIGGAQTLGGALDTQFNNLSTFLS 54
>gi|167562919|ref|ZP_02355835.1| pilin, putative [Burkholderia oklahomensis EO147]
Length = 65
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ FL +E+G TAIEYGL+A LIAVAI +V TLG L+ +F I+ KL
Sbjct: 12 QLMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFTTIAGKL 62
>gi|253996773|ref|YP_003048837.1| Flp/Fap pilin component [Methylotenera mobilis JLW8]
gi|253983452|gb|ACT48310.1| Flp/Fap pilin component [Methylotenera mobilis JLW8]
Length = 64
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
V+ F+ DE G TAIEY L+A+LIAV IIA+VTT G ++ F +++ L
Sbjct: 8 VQRFINDEEGVTAIEYALIAALIAVVIIAAVTTTGTRVCETFRSVATALG 57
>gi|134299956|ref|YP_001113452.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1]
gi|134052656|gb|ABO50627.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1]
Length = 59
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 37/53 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++ N L++E+G EYGL+ +LIAV + ++TTLG LTA F D+++KL P
Sbjct: 3 QMLMNLLKEENGQGMAEYGLILALIAVVCVGALTTLGNGLTAKFTDVNAKLTP 55
>gi|107022590|ref|YP_620917.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116689539|ref|YP_835162.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170732843|ref|YP_001764790.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105892779|gb|ABF75944.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116647628|gb|ABK08269.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169816085|gb|ACA90668.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 56
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
I+K FL++E G TA+EYGL+A LIAVA++ +++TL ++ F+ I+SKL
Sbjct: 4 IIKRFLKEEDGVTAVEYGLIAGLIAVALVTAMSTLTTGISGAFSYIASKL 53
>gi|197295147|ref|YP_002153688.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944626|emb|CAR57230.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 63
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
F+QD+ G TAIEYGL+A+LIA+ I+A++ T+G L VF+ I++ L+
Sbjct: 11 FVQDQDGVTAIEYGLIAALIAIGIVAALATVGTDLKTVFSTIAADLD 57
>gi|299532816|ref|ZP_07046203.1| pilus subunit protein PilA [Comamonas testosteroni S44]
gi|298719040|gb|EFI60010.1| pilus subunit protein PilA [Comamonas testosteroni S44]
Length = 58
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
MK I+K F +DE GATAIEYGL+A LIA ++ + T LGG L +F I L
Sbjct: 1 MKDQIIK-FWRDEEGATAIEYGLIAGLIAAGLVITFTDLGGALKTLFEKIKDAL 53
>gi|197295148|ref|YP_002153689.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944627|emb|CAR57231.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 63
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
F++DE G TAIEYGL+A+LIAV II +++T+G L VF+ I++ L+
Sbjct: 10 RFVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDS 58
>gi|78060319|ref|YP_366894.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964869|gb|ABB06250.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 63
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
F++DE G TAIEYGL+A+LIAV II +++T+G L VF+ I++ L+
Sbjct: 10 RFVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDS 58
>gi|315121899|ref|YP_004062388.1| hypothetical protein CKC_00745 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495301|gb|ADR51900.1| hypothetical protein CKC_00745 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 55
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ K L+DESG +EYGLLA+L+A+ I ++T LG KLT F +S KL
Sbjct: 2 VNCFKKMLKDESGTAFLEYGLLAALVAIVAIGAITNLGTKLTGTFTTVSDKL 53
>gi|303247320|ref|ZP_07333593.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
gi|302491234|gb|EFL51123.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
Length = 56
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ + F++DE GATA+EYGL+A+LIA I+ VTTLG L+ F I++ +
Sbjct: 2 LRAITKFVRDEEGATAVEYGLMAALIAAVIVGVVTTLGQNLSTTFDSIATSI 53
>gi|167584953|ref|ZP_02377341.1| hypothetical protein BuboB_06431 [Burkholderia ubonensis Bu]
Length = 60
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 37/53 (69%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
V ++ D+ G TAIEY LLASLIA+AI+ +V TLG L V+ D+++++ +
Sbjct: 8 VARWIDDKGGVTAIEYALLASLIAMAIVVAVATLGTTLDGVYMDVATRITAAT 60
>gi|254561618|ref|YP_003068713.1| Flp/Fap pilin component [Methylobacterium extorquens DM4]
gi|254268896|emb|CAX24857.1| Flp/Fap pilin component [Methylobacterium extorquens DM4]
Length = 68
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+I K F+ DESGATAIEYG++A++I +AI+ + LT FA + + LN ++
Sbjct: 7 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFATLGTGLNAQT 61
>gi|239831632|ref|ZP_04679961.1| component of type IV pilus, pilin subunit protein [Ochrobactrum
intermedium LMG 3301]
gi|239823899|gb|EEQ95467.1| component of type IV pilus, pilin subunit protein [Ochrobactrum
intermedium LMG 3301]
Length = 62
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ F ++ESGATAIEY L+A LIAV II TLGG + F DI++K+
Sbjct: 3 KLIARFRKNESGATAIEYALIAGLIAVVIIVGAQTLGGAINDKFDDIATKV 53
>gi|56477532|ref|YP_159121.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
gi|56313575|emb|CAI08220.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
Length = 56
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ +++ F+ DE G TAIEYGL+ASL+A+AII LG KL VF I+ KL
Sbjct: 2 LKMLQQFIVDEDGVTAIEYGLIASLVALAIIVGAGALGTKLNDVFNFIAGKL 53
>gi|167841420|ref|ZP_02468104.1| putative pilus subunit protein [Burkholderia thailandensis
MSMB43]
Length = 56
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 34/48 (70%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
K F++DE G +AIEYGL+A+LIAV II +V +G L +VF I S L
Sbjct: 9 KQFVRDEGGVSAIEYGLIAALIAVVIIGAVKAVGTDLNSVFTTIGSDL 56
>gi|39933982|ref|NP_946258.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|39647829|emb|CAE26349.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
Length = 57
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
MK ++K FL +ESGATAIEYGL+A+ I++AII +VT LG KL + F + L
Sbjct: 1 MKRLVLK-FLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLT 54
>gi|192289401|ref|YP_001990006.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|192283150|gb|ACE99530.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 56
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
MK ++K FL +ESGATAIEYGL+A+ I++AII +VT LG KL + F + L
Sbjct: 1 MKRLVLK-FLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLT 54
>gi|309778773|ref|ZP_07673546.1| conserved domain protein [Ralstonia sp. 5_7_47FAA]
gi|308922481|gb|EFP68105.1| conserved domain protein [Ralstonia sp. 5_7_47FAA]
Length = 59
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
MK I+K FL+DE GATA+EYG++A LIA AI V LG +L VF +I +
Sbjct: 1 MKNAILK-FLRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICT 51
>gi|163851900|ref|YP_001639943.1| Flp/Fap pilin component [Methylobacterium extorquens PA1]
gi|163663505|gb|ABY30872.1| Flp/Fap pilin component [Methylobacterium extorquens PA1]
Length = 65
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+I K F+ DESGATAIEYG++A++I +AI+ + LT F + + LN ++
Sbjct: 3 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLNTQT 57
>gi|254255250|ref|ZP_04948566.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158]
gi|124900987|gb|EAY71737.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158]
Length = 241
Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 36/47 (76%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+++E G TAIEYGL+A+LIA+ I+A++TT+G L VF+ ++ L+
Sbjct: 189 LVRNEDGVTAIEYGLIAALIAIGIVAALTTIGTDLKTVFSTLAVDLD 235
>gi|240139023|ref|YP_002963498.1| Flp/Fap pilin component [Methylobacterium extorquens AM1]
gi|240008995|gb|ACS40221.1| Flp/Fap pilin component [Methylobacterium extorquens AM1]
Length = 69
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+I K F+ DESGATAIEYG++A++I +AI+ + LT F + + LN ++
Sbjct: 7 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLNTQT 61
>gi|227823968|ref|YP_002827941.1| probable PilA pilus assembly protein [Sinorhizobium fredii
NGR234]
gi|227342970|gb|ACP27188.1| probable PilA pilus assembly protein [Sinorhizobium fredii
NGR234]
Length = 60
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
I ++DESGATAIEYGL+A+LI+VA+I T LG L ++F +S ++
Sbjct: 4 IFARLMKDESGATAIEYGLIAALISVALITGATALGDSLDSMFNALSGQM 53
>gi|103487278|ref|YP_616839.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256]
gi|98977355|gb|ABF53506.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256]
Length = 54
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 39/54 (72%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
M +K F++D ATAIEYGL+A+LIAVA I+++ +G ++ F ++S++LN
Sbjct: 1 MKFIKKFVRDTKAATAIEYGLIAALIAVAGISAMGLVGNSVSNTFNEVSTELNK 54
>gi|118589700|ref|ZP_01547105.1| flp/fap pilin component [Stappia aggregata IAM 12614]
gi|118437786|gb|EAV44422.1| flp/fap pilin component [Stappia aggregata IAM 12614]
Length = 62
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F+ DESGATAIEYGL+A L+++ I+ +V G ++ +F I ++N
Sbjct: 4 LINRFVNDESGATAIEYGLIAGLLSIVIVGAVAATGTSISGIFTKIQGEMN 54
>gi|315497468|ref|YP_004086272.1| flp/fap pilin component [Asticcacaulis excentricus CB 48]
gi|315415480|gb|ADU12121.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48]
Length = 57
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
M IV+ FL D+SGATAIEY L+ASL+ +A ++ G +++ IS+KL P
Sbjct: 1 MQIVREFLSDKSGATAIEYALIASLVFLAASGAILAYGESFKNMYSFISAKLTP 54
>gi|146338126|ref|YP_001203174.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146190932|emb|CAL74937.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 46
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 36/45 (80%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++DESGATAIEYGL+A+ I++AIIA+V LG L++ F I+S L
Sbjct: 1 MKDESGATAIEYGLIAAGISLAIIAAVNGLGSSLSSKFGSINSSL 45
>gi|110632962|ref|YP_673170.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1]
gi|110283946|gb|ABG62005.1| Flp/Fap pilin component [Chelativorans sp. BNC1]
Length = 57
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+++ F ++ESGATAIEYGL+A LIAV II + +G + F I+++LNP
Sbjct: 3 NLLTRFAKNESGATAIEYGLIAGLIAVVIITAAGLVGTDVRDSFQAIANRLNP 55
>gi|94312583|ref|YP_585792.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93356435|gb|ABF10523.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
Length = 63
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
F + + GATAIEYGL+A LIAVAI+A VT LG L F+++++K+
Sbjct: 9 FRKAQRGATAIEYGLIAGLIAVAIVAGVTNLGQNLGTGFSNLATKV 54
>gi|107028254|ref|YP_625349.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116686247|ref|YP_839494.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170734874|ref|YP_001773988.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105897418|gb|ABF80376.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116651962|gb|ABK12601.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169820912|gb|ACA95493.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 63
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 35/47 (74%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
F++D+ G TAIEYGL+A+LIA+ I+ ++TT+G L VF ++ L+
Sbjct: 11 FVEDQDGVTAIEYGLIAALIAIGIVGALTTVGTDLKTVFNTVADDLD 57
>gi|187926423|ref|YP_001892768.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|241665910|ref|YP_002984269.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|187728177|gb|ACD29341.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|240867937|gb|ACS65597.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
Length = 59
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
MK I+K F++DE GATA+EYG++A LIA AI V LG +L VF +I +
Sbjct: 1 MKNAILK-FIRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICT 51
>gi|294102195|ref|YP_003554053.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261]
gi|293617175|gb|ADE57329.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261]
Length = 53
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++N + DE G +EYGLL +LIAV +IA++ TLG K+ +F ++ KL
Sbjct: 5 LRNLVTDEEGQGMVEYGLLLALIAVVVIAALLTLGPKVAGIFTEVEGKL 53
>gi|300021850|ref|YP_003754461.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
gi|299523671|gb|ADJ22140.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
Length = 59
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M+I F+ DESGATAIEYGL+A+LI VA++ + +G L+ F + L
Sbjct: 1 MNIFSRFMNDESGATAIEYGLIAALIGVALVTILGQVGTSLSGTFTKVDDAL 52
>gi|304392390|ref|ZP_07374331.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295494|gb|EFL89853.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 53
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKL 43
M +K F +DESGATAIEYGLLA+LI++ I ++TT+G L
Sbjct: 1 MTNIKRFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNL 41
>gi|227818618|ref|YP_002822589.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234]
gi|36958874|gb|AAQ87299.1| pilA [Sinorhizobium fredii NGR234]
gi|227337617|gb|ACP21836.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234]
Length = 53
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
MK +V+ F+++ESGATAIEYGL+A LIAV II++V +G + A F IS+ L
Sbjct: 1 MKNLLVR-FVRNESGATAIEYGLIAGLIAVVIISAVQLVGTDIGAKFTAISTAL 53
>gi|315121898|ref|YP_004062387.1| hypothetical protein CKC_00740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495300|gb|ADR51899.1| hypothetical protein CKC_00740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 35
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAI 32
MK++I++ FLQDESGATAIEYGLLA+LI I
Sbjct: 1 MKVNIIRKFLQDESGATAIEYGLLAALIIFCI 32
>gi|323529417|ref|YP_004231569.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323386419|gb|ADX58509.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
F++DE G TAIEYGL+A+LIA+AI+ VT++G L A F I+ L
Sbjct: 11 FVRDEEGVTAIEYGLIATLIALAIVVGVTSIGTNLEAKFMAIAGYL 56
>gi|154250686|ref|YP_001411510.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154154636|gb|ABS61853.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 54
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+K+F+++ESGATAIEYGL+A+ IAV II +V ++G L F I++ +N
Sbjct: 3 QFLKSFVKNESGATAIEYGLIAAGIAVVIIVAVDSVGAALITQFTAIATAIN 54
>gi|328542085|ref|YP_004302194.1| hypothetical protein SL003B_0463 [polymorphum gilvum SL003B-26A1]
gi|326411835|gb|ADZ68898.1| hypothetical protein SL003B_0463 [Polymorphum gilvum SL003B-26A1]
Length = 71
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ ++ FL DE G TA+EYGL+ ++I+VAI+A+V ++G ++ A F +S KL
Sbjct: 15 RRSTLRRFLADERGVTAVEYGLILAMISVAIMATVLSIGEEIAADFTLLSEKL 67
>gi|218530651|ref|YP_002421467.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
gi|218522954|gb|ACK83539.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
Length = 61
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+I K F+ DESGATAIEYGL+A+++ +A++ G L F+ I + LN ++
Sbjct: 3 NITKRFIADESGATAIEYGLVAAMMGIAVVTIFKAFGTSLGNAFSTIGTALNTQA 57
>gi|300694115|ref|YP_003750088.1| flp/fap pilin component [Ralstonia solanacearum PSI07]
gi|299076152|emb|CBJ35465.1| putative Flp/Fap pilin component [Ralstonia solanacearum PSI07]
Length = 58
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
H + FL+DE GATAIEYGL+A LIA I +V LG ++ VF + +
Sbjct: 3 HAILQFLRDEQGATAIEYGLIAGLIAAVIAVAVGKLGTEINTVFGTVCT 51
>gi|150377238|ref|YP_001313833.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
gi|150031785|gb|ABR63900.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 55
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
MK +V+ F ++ESGATAIEYGL+A LI+V IIA + T+G LT F I + L
Sbjct: 1 MKNLLVR-FARNESGATAIEYGLIAGLISVVIIAVMATVGTGLTTRFTAIGTALT 54
>gi|146343301|ref|YP_001208349.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146196107|emb|CAL80134.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 53
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
F +DESGATAIEYGL+ + IA+AII + LG L +F +++KLN
Sbjct: 5 FYEDESGATAIEYGLICAGIALAIITILNKLGLTLEGIFTTLTTKLN 51
>gi|148253065|ref|YP_001237650.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146405238|gb|ABQ33744.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 56
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 31/45 (68%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ ESG TAIEYGLLA+LIAV II VT +G L A+F I KL
Sbjct: 7 IDSESGVTAIEYGLLAALIAVVIIVGVTLIGTNLQAIFNYIGGKL 51
>gi|224824208|ref|ZP_03697316.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
gi|224603627|gb|EEG09802.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
Length = 64
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
I+ + D+ G T+IEY LL SLIAV I++SV LG LTA+FA++++++
Sbjct: 7 ILTSLFNDDEGVTSIEYALLGSLIAVVILSSVLGLGTNLTALFANVATQI 56
>gi|221070071|ref|ZP_03546176.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
gi|220715094|gb|EED70462.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
Length = 54
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADI 50
MK I+K F +DE GATAIEYGL+A LIA I+ +VT LG ++ + I
Sbjct: 1 MKDQIIK-FWRDEEGATAIEYGLIAGLIAAVIVGTVTLLGTRINTLLNTI 49
>gi|307726371|ref|YP_003909584.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307586896|gb|ADN60293.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 57
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ F++DE G TAIEYGL+A+LIA+AII VT +G L A F I+ L
Sbjct: 8 IDAFVRDEEGVTAIEYGLIATLIALAIITGVTAIGTNLEAKFMLIAGYLT 57
>gi|323700356|ref|ZP_08112268.1| Flp/Fap pilin component [Desulfovibrio sp. ND132]
gi|323460288|gb|EGB16153.1| Flp/Fap pilin component [Desulfovibrio desulfuricans ND132]
Length = 60
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 39/56 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
M + N ++DE GATAIEYGL+A+LIA I+A+ + LG ++ + F I+ +++ +
Sbjct: 1 MTKLMNLIRDEEGATAIEYGLIAALIAAGIVAATSALGDQVVSTFDYITGQMSAAT 56
>gi|113866748|ref|YP_725237.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
gi|113525524|emb|CAJ91869.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
Length = 57
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
K+FL+D+ G ++IEY LL SLIA+AI+ SV TL + A++ I+S++
Sbjct: 9 KDFLRDDWGVSSIEYALLGSLIAMAIVVSVATLSNAVKAMYELIASRM 56
>gi|304392387|ref|ZP_07374328.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295491|gb|EFL89850.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 53
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKL 43
M +K F +DESGATAIEYGLLA+LI++ I ++TT+G L
Sbjct: 1 MTNLKKFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNL 41
>gi|219883043|ref|YP_002478207.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219862049|gb|ACL42390.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 70
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
K L ESGATA+EYGLL LIAV IIA++ LG +L +F ++ L
Sbjct: 16 KKRLSGESGATAVEYGLLVGLIAVGIIAALVILGPQLAGLFTSVTESL 63
>gi|116254028|ref|YP_769866.1| pilus component protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115258676|emb|CAK09780.1| putative pilus component protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 55
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M I+K FL D+ GATAIEYGL+A+LI A+++ + G L VF I++ +
Sbjct: 1 MRILKAFLADDRGATAIEYGLIAALICGALVSGLGVFTGALQGVFNVINNNM 52
>gi|116671474|ref|YP_832407.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
gi|116611583|gb|ABK04307.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
Length = 101
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 12 DESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
DE GATA+EYG++ +LIAV II +V LGG LT +F + ++
Sbjct: 36 DEKGATAVEYGIMVALIAVVIIVAVGLLGGTLTTMFEQVKCQVG 79
>gi|46201036|ref|ZP_00055934.2| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 57
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ +DE GATAIEYGL+A+LI+V I + LG KL+ +F IS K
Sbjct: 8 MITKMTRDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLFTTISGKF 57
>gi|83717974|ref|YP_440452.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis E264]
gi|167579109|ref|ZP_02371983.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis TXDOH]
gi|167617224|ref|ZP_02385855.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis Bt4]
gi|257141099|ref|ZP_05589361.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis E264]
gi|83651799|gb|ABC35863.1| Flp/Fap pilin component superfamily [Burkholderia thailandensis
E264]
Length = 72
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
H +L+DES +AIEY L+ASLIA+ II +V +G L +VF+ ++S +
Sbjct: 22 HAFMCWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72
>gi|330816711|ref|YP_004360416.1| Flp/Fap pilin component [Burkholderia gladioli BSR3]
gi|327369104|gb|AEA60460.1| Flp/Fap pilin component [Burkholderia gladioli BSR3]
Length = 57
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++ FL++E G TA+EYGL+A L+AVA++A VT L G + +F + L+
Sbjct: 4 LINRFLKEEDGVTAVEYGLIAGLMAVALVAGVTALSGSIQNLFTYLKGVLDA 55
>gi|56477534|ref|YP_159123.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
gi|56313577|emb|CAI08222.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
Length = 66
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 38/53 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ ++K F++D+ G T+IEY LLA+LI AI+ SV+ LG + ++ D++ K++
Sbjct: 10 VELLKGFIEDQDGVTSIEYALLAALIFGAIVVSVSLLGSSVETLYGDVADKVS 62
>gi|153009816|ref|YP_001371031.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
gi|151561704|gb|ABS15202.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
Length = 59
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F + ESGATAIEYGL+A+LIAV II + T+LG + F I++ +
Sbjct: 3 KLIARFRKSESGATAIEYGLIAALIAVVIIGATTSLGTTIRTQFTAIATAIG 54
>gi|197295149|ref|YP_002153690.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944628|emb|CAR57232.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 72
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVF 47
M + + ++ DE G T+IEY LLAS+ A+A++ SV TL G L A +
Sbjct: 5 MRVARCWIADERGVTSIEYALLASMFAIAVLGSVVTLKGSLGAAY 49
>gi|304392389|ref|ZP_07374330.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295493|gb|EFL89852.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 51
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 30/35 (85%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKL 43
FL+DESGATAIEYGLLA+LI++ I ++TT+G L
Sbjct: 5 FLKDESGATAIEYGLLAALISIVAIGAMTTIGTNL 39
>gi|329890999|ref|ZP_08269342.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
gi|328846300|gb|EGF95864.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
Length = 59
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ + F +DESGATAIEYGL+A+L+AV IIA + L L F ++ +++
Sbjct: 3 NFITRFAKDESGATAIEYGLIAALMAVIIIAGIGFLKPGLEGAFKNVGGQMS 54
>gi|78060318|ref|YP_366893.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964868|gb|ABB06249.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 68
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVF 47
M +V+ ++ DE G T+IEY LL ++ AVA++ +V TL G L V+
Sbjct: 5 MRVVRRWISDEQGVTSIEYALLGAMFAVAVLGTVVTLKGSLADVY 49
>gi|209886528|ref|YP_002290385.1| hypothetical protein OCAR_7417 [Oligotropha carboxidovorans OM5]
gi|209874724|gb|ACI94520.1| conserved domain protein [Oligotropha carboxidovorans OM5]
Length = 54
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F++DESGATAIEY L+A+ IAV IIA+V +G +++ F I S L
Sbjct: 3 NLFARFVKDESGATAIEYALIAAGIAVVIIAAVNGVGSAISSKFETIKSSLQ 54
>gi|53723203|ref|YP_112188.1| pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76818831|ref|YP_336464.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|52213617|emb|CAH39671.1| putative pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76583304|gb|ABA52778.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
Length = 72
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+L+DES +AIEY L+ASLIA+ II +V +G L +VF+ ++S +
Sbjct: 26 RWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72
>gi|114705460|ref|ZP_01438368.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi
HTCC2506]
gi|114540245|gb|EAU43365.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi
HTCC2506]
Length = 62
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
FL++ESGATAIEY L+A +IAV +I + TLG + A F IS ++
Sbjct: 14 RFLKNESGATAIEYALIAGMIAVGLITILGTLGSNMVAGFTKISDEV 60
>gi|296444399|ref|ZP_06886364.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258046|gb|EFH05108.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 54
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ +F+++ESGATAIEYGL+ +LI+V II +V +G L+ F I+ L
Sbjct: 3 NLFASFVENESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNL 53
>gi|293606496|ref|ZP_06688854.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292815119|gb|EFF74242.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 58
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
MK + + F DE G TA+EYGL+A L+AVA+IA+V T L+ +F + +KL+
Sbjct: 1 MKAKLAQ-FWNDEDGITALEYGLIAGLVAVALIAAVGTFTDALSNMFTGLGAKLDA 55
>gi|126442904|ref|YP_001064072.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126456583|ref|YP_001076984.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|134281737|ref|ZP_01768444.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|167725241|ref|ZP_02408477.1| hypothetical protein BpseD_39846 [Burkholderia pseudomallei DM98]
gi|167744171|ref|ZP_02416945.1| hypothetical protein Bpse14_39228 [Burkholderia pseudomallei 14]
gi|167829709|ref|ZP_02461180.1| hypothetical protein Bpseu9_38880 [Burkholderia pseudomallei 9]
gi|167851178|ref|ZP_02476686.1| hypothetical protein BpseB_38421 [Burkholderia pseudomallei
B7210]
gi|167908125|ref|ZP_02495330.1| hypothetical protein BpseN_38236 [Burkholderia pseudomallei NCTC
13177]
gi|167916472|ref|ZP_02503563.1| hypothetical protein Bpse112_38727 [Burkholderia pseudomallei
112]
gi|217424381|ref|ZP_03455880.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|226194001|ref|ZP_03789602.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|237507574|ref|ZP_04520289.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242313440|ref|ZP_04812457.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254182588|ref|ZP_04889182.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|254192452|ref|ZP_04898891.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|254264094|ref|ZP_04954959.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
gi|126222395|gb|ABN85900.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126230351|gb|ABN93764.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|134246799|gb|EBA46886.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|169649210|gb|EDS81903.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|184213123|gb|EDU10166.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|217392846|gb|EEC32869.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|225933946|gb|EEH29932.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|234999779|gb|EEP49203.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242136679|gb|EES23082.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254215096|gb|EET04481.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
Length = 48
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+L+DES +AIEY L+ASLIA+ II +V +G L +VF+ ++S +
Sbjct: 2 RWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|254488860|ref|ZP_05102065.1| Flp/Fap pilin component family [Roseobacter sp. GAI101]
gi|214045729|gb|EEB86367.1| Flp/Fap pilin component family [Roseobacter sp. GAI101]
Length = 67
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
V+ F +DE GATAIEYGL A+L+ I+ SV LG + F ++S L +
Sbjct: 12 VRTFCKDEDGATAIEYGLFAALVGAVIVGSVAGLGKQTDKGFTTMASALTAE 63
>gi|167566929|ref|ZP_02359845.1| hypothetical protein BoklE_30496 [Burkholderia oklahomensis
EO147]
gi|167573998|ref|ZP_02366872.1| hypothetical protein BoklC_29450 [Burkholderia oklahomensis
C6786]
Length = 48
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 35/47 (74%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++L+DES +AIEY L+ASLIA+ II +V +G L +VF+ ++S +
Sbjct: 2 SWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|187919321|ref|YP_001888352.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
gi|187717759|gb|ACD18982.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
Length = 58
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ +K FL++E G AIEY LLA LIAVAII +V + L A+F I + L
Sbjct: 3 NTIKKFLREEDGVAAIEYALLAGLIAVAIIVTVQNMTTNLKAMFNAIGTAL 53
>gi|311107636|ref|YP_003980489.1| Flp/Fap pilin component family protein [Achromobacter
xylosoxidans A8]
gi|310762325|gb|ADP17774.1| Flp/Fap pilin component family protein [Achromobacter
xylosoxidans A8]
Length = 65
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
F DE G TA+EYGL+A ++AVA+I +V G L +F ++ +KL+
Sbjct: 7 QFWNDEDGITALEYGLIAGMVAVALIVAVGAFTGSLKGMFEELGTKLD 54
>gi|167841421|ref|ZP_02468105.1| hypothetical protein Bpse38_32405 [Burkholderia thailandensis
MSMB43]
Length = 48
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 34/46 (73%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+L+DES +AIEY L+ASLIA+ II +V +G L +VF+ ++S +
Sbjct: 3 WLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|107028252|ref|YP_625347.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116687163|ref|YP_840410.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|105897416|gb|ABF80374.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116652878|gb|ABK13517.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
Length = 68
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKL 43
M + + ++ DE G T+IEY LLAS+ AVA++ SV TL G L
Sbjct: 5 MRVARGWIADEQGVTSIEYALLASMFAVAVLGSVVTLKGSL 45
>gi|16263306|ref|NP_436099.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021]
gi|307304375|ref|ZP_07584126.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307318082|ref|ZP_07597518.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|14523985|gb|AAK65511.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021]
gi|306896123|gb|EFN26873.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306902577|gb|EFN33171.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 56
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++ F ++ESGATAIEYGL+A LI+V +I + T+G LT F I + L
Sbjct: 3 NLLARFARNESGATAIEYGLIAGLISVVLITVMGTIGTGLTTRFTAIGTAL 53
>gi|332716312|ref|YP_004443778.1| fimbriae associated protein [Agrobacterium sp. H13-3]
gi|325062997|gb|ADY66687.1| fimbriae associated protein [Agrobacterium sp. H13-3]
Length = 63
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVF 47
+H F +DE+GATA+EYGL+ +I+ AII T + G + VF
Sbjct: 9 LHCFIRFFKDENGATAVEYGLIVGVISAAIIGGATAISGNINTVF 53
>gi|89899598|ref|YP_522069.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
gi|89344335|gb|ABD68538.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
Length = 72
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVF 47
+L DESG TA+EYGLLA+LIAV II +++ G LT ++
Sbjct: 22 EWLIDESGVTAMEYGLLAALIAVTIIGAISATGTSLTTIY 61
>gi|254420002|ref|ZP_05033726.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
gi|196186179|gb|EDX81155.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
Length = 56
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ F +DESGATAIEYGL+A+LIAV II + T+G +L +++ L
Sbjct: 5 ISRFAKDESGATAIEYGLIAALIAVVIITVLGTIGTQLDIKLKEVAKGLG 54
>gi|17937222|ref|NP_534011.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58]
gi|17741918|gb|AAL44327.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58]
Length = 71
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+H NF ++E+GATAIEYGL+A +I+ A+IA + + + AVF I PK
Sbjct: 17 LHFFINFCKNENGATAIEYGLIAGIISAALIAGLGNISSGINAVFQFIVDAF-PKG 71
>gi|168701154|ref|ZP_02733431.1| hypothetical protein GobsU_16634 [Gemmata obscuriglobus UQM 2246]
gi|168701155|ref|ZP_02733432.1| hypothetical protein GobsU_16639 [Gemmata obscuriglobus UQM 2246]
gi|168703133|ref|ZP_02735410.1| hypothetical protein GobsU_26621 [Gemmata obscuriglobus UQM 2246]
gi|168705822|ref|ZP_02738099.1| hypothetical protein GobsU_40192 [Gemmata obscuriglobus UQM 2246]
Length = 66
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
NFL+ E G TA+EY ++ +LI V IA++TTLG + F+ + S + P +
Sbjct: 10 NFLKAEDGPTAVEYAVMLALIVVVCIAAITTLGSNANSTFSFVGSSIKPPT 60
>gi|23016176|ref|ZP_00055935.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 57
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 11 QDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+DE GATAIEYGL+A+LI+V I + LG KL+ +F IS +
Sbjct: 14 RDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLFTTISGNM 57
>gi|170734872|ref|YP_001773986.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|169820910|gb|ACA95491.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 68
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKL 43
M + + ++ DE G T+IEY LLAS+ AVA++ SV TL G L
Sbjct: 5 MRVARGWIVDEQGVTSIEYALLASMFAVAVLGSVVTLKGSL 45
>gi|13472987|ref|NP_104554.1| PilA-like protein [Mesorhizobium loti MAFF303099]
gi|14023735|dbj|BAB50340.1| PilA [Mesorhizobium loti MAFF303099]
Length = 59
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 38/50 (76%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ FL+DE+GATA+EYGL+ +++++ I+A ++ + +T +F+D S+L
Sbjct: 4 VLLRFLKDETGATAVEYGLIVAVLSLTIVAGISQVFNSITWLFSDNGSRL 53
>gi|116671466|ref|YP_832399.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
gi|116611575|gb|ABK04299.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
Length = 64
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 6 VKNFLQ-DESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
VKN L +E GATA+EYGL+ +LI +A I +T +G L +F DIS KL
Sbjct: 15 VKNRLTGEEKGATAVEYGLMVALIVIAAILGITAVGTSLQTLFNDISLKL 64
>gi|163757623|ref|ZP_02164712.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
gi|162285125|gb|EDQ35407.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
Length = 120
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ + F +D++G TAIEYGL+ +LI+V+IIA TLG + F ++ K+N
Sbjct: 61 LKFFECFAKDKTGTTAIEYGLIGTLISVSIIAGAMTLGNTVGNQFQGLADKMN 113
>gi|296444400|ref|ZP_06886365.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258047|gb|EFH05109.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 54
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ F+ +ESGATAIEYGL+ +LI+V II +V +G L+ F I+ L
Sbjct: 4 MIARFVGNESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNL 53
>gi|209884566|ref|YP_002288423.1| hypothetical protein OCAR_5426 [Oligotropha carboxidovorans OM5]
gi|209872762|gb|ACI92558.1| conserved domain protein [Oligotropha carboxidovorans OM5]
Length = 53
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M +K FL+D+SGAT+IEY ++A+ IAV II +V LG L + I + +
Sbjct: 1 MKTLKRFLRDQSGATSIEYAMIAAGIAVVIIVAVNNLGSALNGKYEMIRTSVQ 53
>gi|91788407|ref|YP_549359.1| Flp/Fap pilin component [Polaromonas sp. JS666]
gi|91697632|gb|ABE44461.1| Flp/Fap pilin component [Polaromonas sp. JS666]
Length = 97
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
M+ H ++N L DE+G TAIEY LL+SLI V I+ +V +G + +++ +S+
Sbjct: 33 MQHHPLENLLADEAGVTAIEYALLSSLIVVVILGAVGAVGSSVLSLWRLVSN 84
>gi|148258232|ref|YP_001242817.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146410405|gb|ABQ38911.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 54
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 33/40 (82%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKL 43
+++ F++DESGATAIEYGL+A+ I++AIIA+V LG L
Sbjct: 3 NLLARFVKDESGATAIEYGLIAAGISLAIIAAVNGLGTSL 42
>gi|154250533|ref|YP_001411357.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154154483|gb|ABS61700.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 96
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTT--LGGKLTAVFADISSKLN 55
++ F++DESG +A+EYGLLA+ IAV + A V +GG L VF +S L+
Sbjct: 36 FLRRFMKDESGISAVEYGLLAAGIAVGLWAFVGPDGIGGTLQGVFESVSDDLS 88
>gi|239817409|ref|YP_002946319.1| Flp/Fap pilin component [Variovorax paradoxus S110]
gi|239803986|gb|ACS21053.1| Flp/Fap pilin component [Variovorax paradoxus S110]
Length = 60
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIAS---VTTLGGKLTAVFADISSKL 54
+ FL+DE GATAIEYG++A L+A+ ++A+ T +G LT +F I+ KL
Sbjct: 5 ITRFLRDEEGATAIEYGIIAGLMAIVLVAAFSKTTGIGLALTNMFTAIAGKL 56
>gi|317122050|ref|YP_004102053.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885]
gi|315592030|gb|ADU51326.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885]
Length = 63
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
VK L+DE+G +EYGL+ +LIAV +I ++ L G L ++F+ ++ +LN
Sbjct: 11 VKFRLRDEAGQGMVEYGLIIALIAVVLIGALVALSGGLGSIFSRVTQQLN 60
>gi|190893600|ref|YP_001980142.1| pilus component protein [Rhizobium etli CIAT 652]
gi|190698879|gb|ACE92964.1| putative pilus component protein [Rhizobium etli CIAT 652]
Length = 55
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M ++K F D++GATA+EYGL+A++I A+++ + G L VF+ +S+ +
Sbjct: 1 MRLLKAFFADDTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNI 52
>gi|167821370|ref|ZP_02453050.1| hypothetical protein Bpse9_39988 [Burkholderia pseudomallei 91]
gi|167899809|ref|ZP_02487210.1| hypothetical protein Bpse7_39160 [Burkholderia pseudomallei 7894]
gi|167924328|ref|ZP_02511419.1| hypothetical protein BpseBC_37578 [Burkholderia pseudomallei
BCC215]
gi|254187139|ref|ZP_04893654.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
gi|254296480|ref|ZP_04963936.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|157806473|gb|EDO83643.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|157934822|gb|EDO90492.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
Length = 48
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
L+DES +AIEY L+ASLIA+ II +V +G L +VF+ ++S +
Sbjct: 4 LRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|144898052|emb|CAM74916.1| hypothetical protein MGR_1741 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 59
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 11 QDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+DE GATAIEYGL+A+L+A+ II + L G L +F +++ L
Sbjct: 14 RDERGATAIEYGLIAALVAIVIIGGLQALSGGLNTLFQTVATTL 57
>gi|85373828|ref|YP_457890.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594]
gi|84786911|gb|ABC63093.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594]
Length = 66
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 37/48 (77%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
++ + LQDE+GATA+EYGL+ +L+ +A++A+V +G + A++ +SS
Sbjct: 8 LITSLLQDEAGATAVEYGLILALVFLAMVAAVQGVGNETVAMWDHVSS 55
>gi|241206511|ref|YP_002977607.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860401|gb|ACS58068.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 55
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M ++K F+ D GATAIEYGL+A+LI A+++++ G L VF I++ L
Sbjct: 1 MRLLKAFVADNRGATAIEYGLVAALIGGALVSALGIFSGSLQDVFNVINNNL 52
>gi|319795777|ref|YP_004157417.1| flp/fap pilin component [Variovorax paradoxus EPS]
gi|315598240|gb|ADU39306.1| Flp/Fap pilin component [Variovorax paradoxus EPS]
Length = 61
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVT---TLGGKLTAVFADISSKLN 55
+ F++DE GATAIEYG++A ++AV ++A + TL G + VF IS+ L+
Sbjct: 5 ITRFIRDEEGATAIEYGIIAGMMAVLLVAVFSPSGTLYGAIEGVFGRISTALD 57
>gi|329888706|ref|ZP_08267304.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
gi|328847262|gb|EGF96824.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
Length = 60
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
MK I + F +DE GATAIEYGL+ LI + IIA+V+ + TA++ IS+ ++
Sbjct: 1 MKGFICR-FHRDEGGATAIEYGLICGLIFLVIIAAVSAFAARSTAMYDYISTTIS 54
>gi|326387192|ref|ZP_08208802.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326208373|gb|EGD59180.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 69
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 4/58 (6%)
Query: 1 MKMHIVKNFL----QDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M M + + L DESGATAIEYGL+A+LIA I ++ +LG L+ F+ +S+ +
Sbjct: 4 MTMRFLGDLLARIGNDESGATAIEYGLIAALIATGAIVAMGSLGNSLSNTFSLVSTDM 61
>gi|116694136|ref|YP_728347.1| fimbriae associated protein [Ralstonia eutropha H16]
gi|113528635|emb|CAJ94982.1| fimbriae associated protein [Ralstonia eutropha H16]
Length = 58
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADIS 51
++ F++DE GATAIEYGL+ L+A+AI LG +L A F +S
Sbjct: 3 RLIARFIKDERGATAIEYGLIVGLVALAIAVGAGKLGTELNASFDRLS 50
>gi|209551110|ref|YP_002283027.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536866|gb|ACI56801.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 55
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M I K FL D+ GATA+EYGL+A++I A+++ + G L VF I++ +
Sbjct: 1 MRIFKAFLADDVGATAVEYGLIAAIICTALVSGLGFFTGALQNVFNVINNNM 52
>gi|85716621|ref|ZP_01047591.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
gi|85696622|gb|EAQ34510.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
Length = 59
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVF 47
FL DESGATAIEY L+AS I++ I+A+V +GG L F
Sbjct: 8 RFASKFLWDESGATAIEYALIASGISIVIVAAVIGIGGSLKDRF 51
>gi|146342539|ref|YP_001207587.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146195345|emb|CAL79370.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 53
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 39/52 (75%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M ++ FL+DESGATAIEYGL+A+ I++AIIASV LG KL F I+S L
Sbjct: 1 MSVILRFLKDESGATAIEYGLIAAGISIAIIASVNGLGSKLNTKFTSINSSL 52
>gi|218462815|ref|ZP_03502906.1| putative pilus component protein [Rhizobium etli Kim 5]
gi|218661044|ref|ZP_03516974.1| putative pilus component protein [Rhizobium etli IE4771]
Length = 55
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M ++K F D +GATA+EYGL+A+LI A+++ + G L VF+ +S+ +
Sbjct: 1 MRLLKAFFADGTGATAVEYGLIAALICTALVSGLGFFTGSLQNVFSLLSNNI 52
>gi|325964119|ref|YP_004242025.1| Flp pilus assembly protein, pilin Flp [Arthrobacter
phenanthrenivorans Sphe3]
gi|323470206|gb|ADX73891.1| Flp pilus assembly protein, pilin Flp [Arthrobacter
phenanthrenivorans Sphe3]
Length = 63
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADIS 51
+KN L +E GATA+EYG++ LIAV II +V LG L +F ++
Sbjct: 15 LKNRLSNEKGATAVEYGIMVGLIAVVIIVAVQLLGTTLDGMFDKVN 60
>gi|85713501|ref|ZP_01044491.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
gi|85699405|gb|EAQ37272.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
Length = 56
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
++ FL+DESGATAIEYGL+A+ IAVAII +V TLG L F ++ L+ K
Sbjct: 3 NLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFQNVQDDLHKK 56
>gi|313902399|ref|ZP_07835802.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965]
gi|313467330|gb|EFR62841.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965]
Length = 66
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
VK L+DE+G +EYGL+ +LIAV +I ++ + G L+A+F +S+ L
Sbjct: 11 VKFRLRDEAGQGMVEYGLIIALIAVVLIGALVAMQGGLSAIFERVSTTLEK 61
>gi|300021851|ref|YP_003754462.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
gi|299523672|gb|ADJ22141.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
Length = 58
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 33/45 (73%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADI 50
V+ F DE+GAT+IEY L+AS++++AI+ ++ + G L +VF +
Sbjct: 6 VREFAADENGATSIEYALIASIVSIAIVGALMGVKGSLVSVFESV 50
>gi|218508205|ref|ZP_03506083.1| putative pilus component protein [Rhizobium etli Brasil 5]
gi|327193400|gb|EGE60300.1| putative pilus component protein [Rhizobium etli CNPAF512]
Length = 55
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M ++K F D +GATA+EYGL+A++I A+++ + G L VF+ +S+ +
Sbjct: 1 MRLLKAFFADGTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNI 52
>gi|92116959|ref|YP_576688.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
gi|91799853|gb|ABE62228.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
Length = 54
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 4/47 (8%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG----GKLTAV 46
+ +FL+DESGATAIEY L+A+ I++ I+ +VT +G G+ TAV
Sbjct: 3 KLTSDFLRDESGATAIEYALIATGISILIVVAVTGIGSSVNGRFTAV 49
>gi|90425193|ref|YP_533563.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90107207|gb|ABD89244.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 53
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+IV FL+DESGATAIEYGL+A+ IA+AII +V T+G L+A F I SKL
Sbjct: 3 NIVARFLKDESGATAIEYGLIAAGIALAIITAVNTVGSNLSAKFTSIGSKL 53
>gi|148261013|ref|YP_001235140.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5]
gi|146402694|gb|ABQ31221.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5]
Length = 67
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
F +D G TA+EYGL+A+L+AV II + TTL G L IS+ L+ +
Sbjct: 16 FAKDNRGVTALEYGLIAALMAVVIIGAFTTLSGDLKGAIDGISNALSANT 65
>gi|307943142|ref|ZP_07658487.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773938|gb|EFO33154.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 56
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ F +DESGATAIEYGL+A LIAV II +VTTLG L +F I++ L
Sbjct: 3 NVFARFAKDESGATAIEYGLIAGLIAVVIIGTVTTLGTTLNGIFETINTDL 53
>gi|317123661|ref|YP_004097773.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043]
gi|315587749|gb|ADU47046.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043]
Length = 59
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 13 ESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
E GATA+EYGL+ +LIAVAI+ +V LG L +FA + + +N
Sbjct: 15 EEGATAVEYGLMVALIAVAIMVTVGLLGDALDGLFARVLAAVNA 58
>gi|326404413|ref|YP_004284495.1| putative pilin subunit protein [Acidiphilium multivorum AIU301]
gi|325051275|dbj|BAJ81613.1| putative pilin subunit protein [Acidiphilium multivorum AIU301]
Length = 63
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
F +D G TA+EYGL+A+L+AV IIA+ LG L V ++++KL
Sbjct: 16 FAKDNRGVTAMEYGLIAALMAVVIIAAFGILGNGLGNVMTELNNKL 61
>gi|296134301|ref|YP_003641548.1| Flp/Fap pilin component [Thermincola sp. JR]
gi|296032879|gb|ADG83647.1| Flp/Fap pilin component [Thermincola potens JR]
Length = 54
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++K ++ESG EYGL+ +LI +A+IA + T+GG L F ++S+ L
Sbjct: 4 MIKKLWKEESGQGMTEYGLILALIVIAVIAIMATMGGNLKNKFENVSNAL 53
>gi|21673264|ref|NP_661329.1| hypothetical protein CT0425 [Chlorobium tepidum TLS]
gi|21646352|gb|AAM71671.1| hypothetical protein CT0425 [Chlorobium tepidum TLS]
Length = 69
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 5 IVKNFLQD------ESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++ FLQ + G T IEY L+ASLIAVA+IA + T+G L VF+ + S L
Sbjct: 12 VLSGFLQQYFGVKSQKGVTMIEYALIASLIAVAVIAVLLTVGSNLQTVFSYVGSNLTT 69
>gi|254178185|ref|ZP_04884840.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399]
gi|254199900|ref|ZP_04906266.1| pilin, flp/fap family [Burkholderia mallei FMH]
gi|254206232|ref|ZP_04912584.1| pilin, flp/fap family [Burkholderia mallei JHU]
gi|254358351|ref|ZP_04974624.1| pilin, flp/fap family [Burkholderia mallei 2002721280]
gi|147749496|gb|EDK56570.1| pilin, flp/fap family [Burkholderia mallei FMH]
gi|147753675|gb|EDK60740.1| pilin, flp/fap family [Burkholderia mallei JHU]
gi|148027478|gb|EDK85499.1| pilin, flp/fap family [Burkholderia mallei 2002721280]
gi|160699224|gb|EDP89194.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399]
Length = 42
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 17 TAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
TAIEYGL+A LIAVAI +V T+G L+A+F+ I+SKL
Sbjct: 2 TAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKL 39
>gi|91976437|ref|YP_569096.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91682893|gb|ABE39195.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 55
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M ++ F+ D SGATAIEY +LA I++ II V LG KL + + +SS +
Sbjct: 1 MLRRLISRFVSDTSGATAIEYAILAVGISIVIIGVVNGLGTKLNSSYDSVSSAI 54
>gi|304322119|ref|YP_003855762.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis
HTCC2503]
gi|303301021|gb|ADM10620.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis
HTCC2503]
Length = 54
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVT-TLGGKLTAVFADISSKLN 55
+K FL DE GATA+EYGL+ ++IAVA++ +V G +L F D +S +
Sbjct: 1 MKWFLSDEEGATAMEYGLIVAIIAVALVVAVQGETGTRLQKAFNDAASGFD 51
>gi|329847250|ref|ZP_08262278.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
gi|328842313|gb|EGF91882.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
Length = 56
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
+++ F+ DE GATAIEYGL+A L+ + ++ ++T G T ++ I
Sbjct: 1 MLRRFIADERGATAIEYGLVAGLLFLGVVGAITAYGDAFTTMYEGIRD 48
>gi|325673443|ref|ZP_08153134.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC
33707]
gi|325555464|gb|EGD25135.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC
33707]
Length = 67
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
M + + +D+ GATA+EYGL+ + IA+ II +V GG+L+ +F + + NP +
Sbjct: 11 MGLDVKDRLTRDDRGATAVEYGLMVAGIAMVIIIAVFAFGGRLSTLFQNFNFA-NPGN 67
>gi|21673265|ref|NP_661330.1| hypothetical protein CT0426 [Chlorobium tepidum TLS]
gi|21646353|gb|AAM71672.1| hypothetical protein CT0426 [Chlorobium tepidum TLS]
Length = 69
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 5 IVKNFLQD------ESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++ FLQ + G T IEY L+ASLIAVA+IA + T+G L VF+ + S L
Sbjct: 12 VLSGFLQQYFGVKSQKGVTMIEYALIASLIAVAVIAVLLTVGSNLKTVFSYVGSNLTT 69
>gi|188592028|ref|YP_001796626.1| flp/fap pilin component [Cupriavidus taiwanensis LMG 19424]
gi|170938402|emb|CAP63389.1| putative Flp/Fap pilin component [Cupriavidus taiwanensis LMG
19424]
Length = 58
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F++DE GATAIEYGL+ LIA+ + LG +L + +S K++
Sbjct: 3 RLIARFIKDERGATAIEYGLIVGLIALGLTVGAGKLGDELNLSYERLSVKIS 54
>gi|328952518|ref|YP_004369852.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328452842|gb|AEB08671.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 65
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 35/49 (71%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+ +DE+GATAIEYGL+ ++A +I ++ T KL ++F+ I++KL+
Sbjct: 7 SLWRDEAGATAIEYGLIVGIMAATLITALGTFSEKLESLFSAINTKLSE 55
>gi|319785611|ref|YP_004145087.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171499|gb|ADV15037.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 60
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+++ F++DESGATAIEYGL+A+LIA+AII TLG L A F +I S LN
Sbjct: 3 NLIARFVKDESGATAIEYGLIAALIALAIITGAGTLGNALNAKFTNIGSTLN 54
>gi|85708397|ref|ZP_01039463.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1]
gi|85689931|gb|EAQ29934.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1]
Length = 61
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
Query: 8 NFLQ----DESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
NFL+ D SGATA+EYGL+ SLI VA+IA++ + + +++D+S
Sbjct: 5 NFLKHIGNDNSGATAVEYGLIVSLIVVAMIAALNGVANETIKMWSDVSD 53
>gi|187927691|ref|YP_001898178.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724581|gb|ACD25746.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 56
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
+ +L+D+ G T+IEY LL SLIA+ I+ SV LG + +++ I++
Sbjct: 8 RKWLRDDQGVTSIEYALLGSLIAIVILGSVVALGSGVKSLYEMIAA 53
>gi|302381311|ref|YP_003817134.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302191939|gb|ADK99510.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 57
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVF 47
M +++ FL DE GATAIEYG++ I + I+A T K+ +F
Sbjct: 1 MSLIRRFLSDERGATAIEYGMIVGAIFLVIVAGATAFSDKVIVMF 45
>gi|162147488|ref|YP_001601949.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
gi|209545595|ref|YP_002277824.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
gi|161786065|emb|CAP55647.1| putative Flp/Fap pilin component [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533272|gb|ACI53209.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
Length = 56
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 11 QDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
G TA+EYGL+A+LIA I+ +V T+G KL VF+ I + L
Sbjct: 13 NSRRGVTALEYGLIAALIAAVIMTAVGTIGSKLNTVFSSIGTDL 56
>gi|283852354|ref|ZP_06369625.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
gi|283572311|gb|EFC20300.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
Length = 56
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ NF++DE GATA+EYGL+ +LIA I+ VTTLG L F +I++ ++
Sbjct: 5 ITNFVRDEEGATAVEYGLMVALIAAVIVGVVTTLGTTLQGTFTNITTAIS 54
>gi|328545282|ref|YP_004305391.1| PilA2 pilus assembly protein [polymorphum gilvum SL003B-26A1]
gi|326415024|gb|ADZ72087.1| PilA2 pilus assembly protein [Polymorphum gilvum SL003B-26A1]
Length = 60
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ F +DESGATAIEYGL+A LI+V I+ +V T+G L++VF IS++L
Sbjct: 3 NLFARFAKDESGATAIEYGLIAGLISVVIVGTVVTIGTDLSSVFTKISTEL 53
>gi|147677780|ref|YP_001211995.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum
thermopropionicum SI]
gi|146273877|dbj|BAF59626.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum
thermopropionicum SI]
Length = 59
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG----GKLTAVFADISSKLNP 56
++K L++E+G EYGL+ +LIAV +IA++TTLG KL V I NP
Sbjct: 4 LIKRLLREENGQGMAEYGLILALIAVVVIAALTTLGTNIKTKLETVGNKIGENPNP 59
>gi|220913379|ref|YP_002488688.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860257|gb|ACL40599.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 66
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
++N + E GATA EY LL + IA+ IIA VT G L+A F+ + S
Sbjct: 15 LRNRMDSEKGATATEYSLLVAFIALLIIAGVTLFGNALSAWFSTLGS 61
>gi|85859142|ref|YP_461344.1| flp/Fap pilin component [Syntrophus aciditrophicus SB]
gi|85722233|gb|ABC77176.1| flp/fap pilin component [Syntrophus aciditrophicus SB]
Length = 54
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFAD 49
FL+ E GATAIEY L+A LI +AI++SV+ LG + V D
Sbjct: 7 FLKSEDGATAIEYALIAGLIFLAIVSSVSFLGQSVKTVLYD 47
>gi|170696790|ref|ZP_02887899.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170138306|gb|EDT06525.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 55
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+FL+D G TA+EYGL+A LI V I ++V LG +L F I+ L
Sbjct: 7 SFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTIAGLL 53
>gi|115525746|ref|YP_782657.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
gi|115519693|gb|ABJ07677.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
Length = 81
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 42/54 (77%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+I+ FL+DESGATAIEYGL+A+ IA+AII +V T+G L+ F +IS++L K
Sbjct: 27 NILARFLKDESGATAIEYGLIAAGIALAIITAVNTVGTDLSTKFGEISTELTKK 80
>gi|220913378|ref|YP_002488687.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860256|gb|ACL40598.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 66
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
VK+ E GATA EY LL + IA+ IIA VT G L+ F+ + S++
Sbjct: 15 VKDRFSSEKGATATEYSLLVAFIALLIIAGVTLFGNALSGWFSTLGSRVG 64
>gi|115361029|ref|YP_778166.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115286357|gb|ABI91832.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 68
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
+ ++ DE G TAIEY LLA++ A ++ SV TL G L ++ I+S
Sbjct: 10 ISRWIDDEQGVTAIEYALLAAMFATVVLGSVVTLKGSLQDMYDMIAS 56
>gi|304393805|ref|ZP_07375730.1| phosphoribosyl-AMP cyclohydrolase [Ahrensia sp. R2A130]
gi|303294004|gb|EFL88379.1| phosphoribosyl-AMP cyclohydrolase [Ahrensia sp. R2A130]
Length = 65
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG 40
+K K F DE GATAIEYGL A +IA+A I ++ G
Sbjct: 2 LKRGFTKRFAGDERGATAIEYGLAAGMIALAAIGGMSAAG 41
>gi|260467147|ref|ZP_05813325.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259029071|gb|EEW30369.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 59
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ FL DE+GATA+EY L+ ++++ II ++ + +T +F+D S+L
Sbjct: 4 VLLRFLTDETGATAVEYALIVCVLSLTIIGGISQVFNSITWLFSDNGSRL 53
>gi|121534393|ref|ZP_01666217.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1]
gi|121307163|gb|EAX48081.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1]
Length = 57
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M ++K +L+ + G +EYGL+ +LIAV +I ++T +G L +F +++ +
Sbjct: 3 MWWEMIKTYLRCQKGQGMVEYGLILALIAVVVIGALTLMGTNLQGMFNNVAGNV 56
>gi|148553539|ref|YP_001261121.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148498729|gb|ABQ66983.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 61
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 2 KMHI-VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ H+ + +D GATA+EYGL+ SLI +AI+ +V +LG + + + DI+ ++
Sbjct: 5 RRHVPFRALARDCRGATAVEYGLILSLIFMAIMGAVASLGSSVQSRWNDIAERV 58
>gi|118588530|ref|ZP_01545939.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614]
gi|118439236|gb|EAV45868.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614]
Length = 75
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLT-AVFADISSKLN 55
K F++DE GAT IEYGL+ I++ I+ ++T +G + +F IS+ L
Sbjct: 20 KEFVRDERGATMIEYGLIVGFISIIILITMTAIGTTMRDDIFGKISTTLQ 69
>gi|187923641|ref|YP_001895283.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
gi|187714835|gb|ACD16059.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
Length = 59
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ FL D G TAIEYGL+A L+ + I +VT +G ++ V ++ K+
Sbjct: 6 QRFLADNKGVTAIEYGLIAGLVVLVIATAVTNVGTNVSTVLQQVADKI 53
>gi|91783007|ref|YP_558213.1| putative pilus subunit protein, PilA like [Burkholderia
xenovorans LB400]
gi|91686961|gb|ABE30161.1| Putative pilus subunit protein, PilA like protein [Burkholderia
xenovorans LB400]
Length = 55
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
+ FL++ G TAIEYGL+A L+ + I +V+++G ++AV ++S
Sbjct: 6 QRFLKENKGVTAIEYGLIAGLVVLVIAGAVSSVGSNISAVMTKVAS 51
>gi|194288841|ref|YP_002004748.1| flp pilin component [Cupriavidus taiwanensis LMG 19424]
gi|193222676|emb|CAQ68679.1| Flp pilin component [Cupriavidus taiwanensis LMG 19424]
Length = 61
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ + FL+DE G TAIEYGL+A+LIA+ II SV T+G +L +VF+ I S L
Sbjct: 7 MFQQFLRDEDGVTAIEYGLIAALIAIVIIVSVQTVGTQLNSVFSKIGSYL 56
>gi|168703134|ref|ZP_02735411.1| hypothetical protein GobsU_26626 [Gemmata obscuriglobus UQM 2246]
Length = 65
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 33/46 (71%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADIS 51
V FL+ E G TA+EY ++ +LI V ++A+++ +GG +A++ D+S
Sbjct: 9 VVEFLKGEDGPTAVEYAVMLALIIVVLVAAISNIGGTTSAMYNDLS 54
>gi|75674502|ref|YP_316923.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
gi|74419372|gb|ABA03571.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
Length = 55
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 35/51 (68%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ FL+DESGATAIEYGL+A+ IAVAII +V TLG L F + L
Sbjct: 3 NLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFTKVEQDL 53
>gi|73542325|ref|YP_296845.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72119738|gb|AAZ62001.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 74
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 37/52 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++++ + L +++ T+IEY LL LIA+AI+ SV+++G + ++ I++K+
Sbjct: 22 LNLIADLLHEDAAVTSIEYALLGMLIAIAIVGSVSSVGDAVKTLYESIAAKM 73
>gi|323525742|ref|YP_004227895.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323382744|gb|ADX54835.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+FL+D G TA+EYGL+A LI V I ++V LG +L F +++ L
Sbjct: 7 SFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVAALL 53
>gi|94497282|ref|ZP_01303853.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58]
gi|94423145|gb|EAT08175.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58]
Length = 54
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
M V+ L++E GATAIEYGL+A+LIAVA I ++T+LGG L F +S L+
Sbjct: 1 MQFVRKMLKNEKGATAIEYGLIAALIAVAAIGAMTSLGGNLKNTFNSVSDNLDQ 54
>gi|307730010|ref|YP_003907234.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307584545|gb|ADN57943.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 59
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+FL+D G TA+EYGL+A LI V I ++V LG +L F ++ L
Sbjct: 7 SFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVAGLL 53
>gi|296158790|ref|ZP_06841619.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
gi|295890995|gb|EFG70784.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
Length = 57
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
+ FL++ G TAIEYGL+A L+ + I +VT++G ++ V +++
Sbjct: 6 QRFLKENKGVTAIEYGLIAGLVVIVIAGAVTSVGANISTVMTKVAN 51
>gi|294012383|ref|YP_003545843.1| putative pilin Flp [Sphingobium japonicum UT26S]
gi|292675713|dbj|BAI97231.1| putative pilin Flp [Sphingobium japonicum UT26S]
Length = 53
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M ++ +++E GATAIEYGL+A+LIAVA I ++++LGGKL F ++S L
Sbjct: 1 MQFIRKMMKNEKGATAIEYGLIAALIAVAAIGAMSSLGGKLGNTFNNVSGNL 52
>gi|254420564|ref|ZP_05034288.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
gi|196186741|gb|EDX81717.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
Length = 59
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLG 40
FL D+ GATAIEYGL+ LI VAI+ + LG
Sbjct: 8 FLNDDRGATAIEYGLICGLIFVAILGGLNALG 39
>gi|319781330|ref|YP_004140806.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167218|gb|ADV10756.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 61
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 34/46 (73%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
FL DE+GATA+EYG++ +++++AI+ + + + +F+D +SKL
Sbjct: 8 FLNDETGATAVEYGVIIAVLSLAIVGGIGEVRDGIIWLFSDNNSKL 53
>gi|188581864|ref|YP_001925309.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
gi|179345362|gb|ACB80774.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
Length = 60
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 11 QDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
Q + GATAIEYGL+ + +A+AI+ + + G LT VF + S
Sbjct: 14 QHDGGATAIEYGLVCTFVALAILVGLQSFGSTLTEVFPKVVS 55
>gi|92116016|ref|YP_575745.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
gi|91798910|gb|ABE61285.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
Length = 56
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++VK F +DESGATAIEYGL+A+ IAVAII++V +G L + F +S +L
Sbjct: 3 NLVKRFAKDESGATAIEYGLIAAGIAVAIISAVNLVGTNLISKFTQVSDQL 53
>gi|194335911|ref|YP_002017705.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1]
gi|194308388|gb|ACF43088.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1]
Length = 81
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ + G T IEY L+A LI+VA IA+VT +G L VF IS L+
Sbjct: 34 IRSQKGVTMIEYALIAGLISVATIAAVTLIGTSLNEVFEKISDALD 79
>gi|194288840|ref|YP_002004747.1| flp pilin component [Cupriavidus taiwanensis LMG 19424]
gi|193222675|emb|CAQ68678.1| Flp pilin component [Cupriavidus taiwanensis LMG 19424]
Length = 57
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 33/44 (75%)
Query: 11 QDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
D++G T+IEY LL LIAVAI+++V+T+G + ++ I+S++
Sbjct: 13 HDDAGVTSIEYALLGMLIAVAIVSTVSTVGDAVKLMYEMIASRM 56
>gi|172065269|ref|YP_001815981.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171997511|gb|ACB68428.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 68
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
V ++ D+ G T+IEY L+ +LIA ++ASV TLGG L + I+S
Sbjct: 10 VLRWIGDDQGVTSIEYALIGALIATLVMASVMTLGGSLDDTYNMIAS 56
>gi|320101689|ref|YP_004177280.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644]
gi|319748971|gb|ADV60731.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644]
Length = 62
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVF 47
++ HIV +FL+ E G TA+EY ++ +LI V IA++TTLG F
Sbjct: 3 IRKHIV-DFLKAEDGPTAVEYAVMVALIIVVCIAAITTLGQSANETF 48
>gi|197118223|ref|YP_002138650.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
gi|197087583|gb|ACH38854.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
Length = 63
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 2 KMHI-VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
KM + +++ LQD+ GAT +EYGL+ +LIA + V ++G + + F I L P
Sbjct: 6 KMFVQMRSKLQDQKGATMVEYGLMLALIAAVCVTVVGSIGTQAESTFQTIVDALTP 61
>gi|323137854|ref|ZP_08072929.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322396857|gb|EFX99383.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVF 47
++NFL D GATA+EY +A ++++ IIA TT+G KL+ ++
Sbjct: 5 LRNFLVDTRGATALEYVTIAFMVSIIIIAGSTTIGTKLSTLY 46
>gi|307943137|ref|ZP_07658482.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773933|gb|EFO33149.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 59
Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
MK +V+ L+DE+G T+IEY L+ L+++ +I +VT +G L ++F + S L+ S
Sbjct: 1 MKNLLVR-LLKDEAGTTSIEYALIGVLLSIIMIGAVTMMGTSLNSMFEGVESGLSIGS 57
>gi|75675346|ref|YP_317767.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
gi|74420216|gb|ABA04415.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
Length = 57
Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVF 47
L D SGATAIEY L+AS I++ I+A+V+ +GG L F
Sbjct: 10 ELLWDTSGATAIEYALIASGISIVIVAAVSGIGGSLRDRF 49
>gi|39934951|ref|NP_947227.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|39648802|emb|CAE27323.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
Length = 63
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F D GATAIEY ++A+ +++ I+ VTTLG L + +S L
Sbjct: 12 RLISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSDALK 63
>gi|171920997|gb|ACB59180.1| Flp1 [Actinobacillus suis ATCC 33415]
Length = 81
Score = 42.0 bits (97), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGG---KLTAVFADISSKLNP 56
++NF Q++ G TAIEYGL+A +A+ II GG L A FAD++ ++
Sbjct: 17 IRNFKQNQQGVTAIEYGLIAVALAILIITVFYNDGGFIQSLKAKFADLTKSIDS 70
>gi|296391005|ref|ZP_06880480.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAb1]
gi|313106825|ref|ZP_07793037.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016]
gi|310879539|gb|EFQ38133.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016]
Length = 70
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIA--SVTTLG--GKLTAVFADISSKLN 55
V+ FL DE GA AIEY ++A LIAVA+IA S T G G L A F + +K+
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVG 65
>gi|116052340|ref|YP_792651.1| hypothetical protein PA14_55940 [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115587561|gb|ABJ13576.1| putative pilus assembly protein [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 70
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIA--SVTTLG--GKLTAVFADISSKLN 55
V+ FL DE GA AIEY ++A LIAVA+IA S T G G L A F + +K+
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVG 65
>gi|312139252|ref|YP_004006588.1| flp/fap pilin component [Rhodococcus equi 103S]
gi|311888591|emb|CBH47903.1| putative Flp/Fap pilin component [Rhodococcus equi 103S]
Length = 68
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVF 47
M + + +D+ GATA+EYGL+ + IA+ II +V G K+T +F
Sbjct: 11 MGLDVKDRLTRDDRGATAVEYGLMVAGIAMVIIVAVFAFGDKITDLF 57
>gi|323702110|ref|ZP_08113778.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574]
gi|323532992|gb|EGB22863.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574]
Length = 54
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
I+ N L+DE+G EYGL+ +LIA I + TLG + D++ +L
Sbjct: 3 EIIMNLLRDENGQGMAEYGLILALIAAVCIVAFKTLGSSINTKMGDVNQQL 53
>gi|156741109|ref|YP_001431238.1| Flp/Fap pilin component [Roseiflexus castenholzii DSM 13941]
gi|156232437|gb|ABU57220.1| Flp/Fap pilin component [Roseiflexus castenholzii DSM 13941]
Length = 52
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+V++F E G +EY L+ LIA+ +I +T LG +++ VF+ I+S L+
Sbjct: 1 MVRSFFAKEEGQGLVEYALILVLIAIVVIGILTLLGNRVSQVFSQINSGLS 51
>gi|167624209|ref|YP_001674503.1| hypothetical protein Shal_2285 [Shewanella halifaxensis HAW-EB4]
gi|167354231|gb|ABZ76844.1| hypothetical protein Shal_2285 [Shewanella halifaxensis HAW-EB4]
Length = 65
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++K F++DESG TA+EY + L+ +IA+ TLG TA ++S +N S
Sbjct: 6 LLKEFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGDNATAKIDCLASAVNGAS 59
>gi|153834036|ref|ZP_01986703.1| putative fimbrial protein [Vibrio harveyi HY01]
gi|148869591|gb|EDL68581.1| putative fimbrial protein [Vibrio harveyi HY01]
Length = 57
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIAS--VTTLGGKLTAVFADISS 52
+++K+F++DE G T +EY L A+LI A + S TTL GK ++V ISS
Sbjct: 6 NLIKDFMEDEEGLTLLEYILGAALIVTAFLTSGFWTTLSGKFSSVAGRISS 56
>gi|325964110|ref|YP_004242016.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
gi|323470197|gb|ADX73882.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
Length = 60
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 6 VKNFL-QDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
VK+ L ++E GAT +EYG++ + IAV ++A+V LG K+ +F +S+ +
Sbjct: 11 VKDRLAREEKGATMVEYGIMVAFIAVLVMAAVIILGPKIAGLFTSVSTAI 60
>gi|328474266|gb|EGF45071.1| putative fimbrial protein [Vibrio parahaemolyticus 10329]
Length = 57
Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIAS--VTTLGGKLTAVFADISS 52
+++K+F++DE G T +EY L A+LI A + S TTL GK T+V + I++
Sbjct: 6 NLIKDFMEDEEGLTLLEYILGAALIVTAFLTSGFWTTLSGKFTSVASQINN 56
>gi|170749895|ref|YP_001756155.1| Flp/Fap pilin component [Methylobacterium radiotolerans JCM 2831]
gi|170656417|gb|ACB25472.1| Flp/Fap pilin component [Methylobacterium radiotolerans JCM 2831]
Length = 54
Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ F DESGATAIEYG++A+LIAVAII ++ T+G LT+ F+ IS LN
Sbjct: 4 LFTRFASDESGATAIEYGMIAALIAVAIITALKTVGTSLTSKFSQISGNLN 54
>gi|172062956|ref|YP_001810607.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171995473|gb|ACB66391.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 59
Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGK--LTAVFADISSKLNP 56
+ VK+ L+DE G +++EY +LA +I VA+ A T L G L+++F I +K+N
Sbjct: 2 LQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTVLSGTSGLSSIFTTILNKVNS 57
>gi|49082500|gb|AAT50650.1| PA4306 [synthetic construct]
Length = 73
Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIA--SVTTLG--GKLTAVFADISSKLN 55
V+ FL DE GA AIEY ++A LIAVA+IA S T G G L A F + K+
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVG 65
>gi|15966374|ref|NP_386727.1| hypothetical protein SMc02446 [Sinorhizobium meliloti 1021]
gi|307313039|ref|ZP_07592666.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307321045|ref|ZP_07600451.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|15075645|emb|CAC47200.1| Putative pilus assembly protein [Sinorhizobium meliloti 1021]
gi|306893320|gb|EFN24100.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306899358|gb|EFN29992.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 57
Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M ++ L+D GATA+EYGLLA+LI+V ++ + G L + +++ +
Sbjct: 1 METLRRLLRDHDGATAVEYGLLAALISVGLLIGLQNFSGALLGMLTFVTNTIE 53
>gi|283778146|ref|YP_003368901.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283436599|gb|ADB15041.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 58
Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M + NFL++E G TA+EY ++ ++I + IA V +G D +KLN
Sbjct: 1 MQWISNFLREEDGPTAVEYAVMLAMIIMVCIAGVVLIGQAANDSITDSGNKLN 53
>gi|15599502|ref|NP_252996.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1]
gi|9950529|gb|AAG07694.1|AE004847_1 Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1]
Length = 72
Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIA--SVTTLG--GKLTAVFADISSKLN 55
V+ FL DE GA AIEY ++A LIAVA+IA S T G G L A F + K+
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVG 65
>gi|319782175|ref|YP_004141651.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317168063|gb|ADV11601.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 72
Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
M + + F DE+GA +EY +L +IAVA I +V +GG + F+ + + L S
Sbjct: 5 MTMTRQFRDDENGAAMVEYSILIGIIAVASIMTVLAIGGWVNGRFSALCTALEAAS 60
>gi|145219386|ref|YP_001130095.1| Flp/Fap pilin component [Prosthecochloris vibrioformis DSM 265]
gi|145205550|gb|ABP36593.1| Flp/Fap pilin component [Chlorobium phaeovibrioides DSM 265]
Length = 74
Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ + GAT IEY L+A L++VA+I +VT +G + VF +I+ L
Sbjct: 23 VKSQKGATMIEYALIAGLVSVAVIGAVTLIGTDVNLVFGEITDALE 68
>gi|167566928|ref|ZP_02359844.1| putative pilus subunit protein [Burkholderia oklahomensis EO147]
gi|167573997|ref|ZP_02366871.1| putative pilus subunit protein [Burkholderia oklahomensis C6786]
Length = 56
Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ VK F++DE G +AIEYGL+A+LIA+ II SV T+G L +VF+ I + L
Sbjct: 5 VQYVKQFVRDEGGVSAIEYGLIAALIAIVIIGSVKTVGTNLNSVFSTIGNDL 56
>gi|163758977|ref|ZP_02166063.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43]
gi|162283381|gb|EDQ33666.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43]
Length = 86
Score = 41.6 bits (96), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M+ + L D +GAT+IEYGL+A+++++A+ + V +G L+ F +++ L
Sbjct: 1 MRKKLCTRALADRAGATSIEYGLIAAVLSLALFSGVGVIGQSLSTSFERVAANLE 55
>gi|146339727|ref|YP_001204775.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146192533|emb|CAL76538.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 54
Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 36/51 (70%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ +FL+ ++GAT+IEY ++A +++ I+A+V LG L++ F I+S +
Sbjct: 3 QLIASFLRHQAGATSIEYAIIAGGLSIVILAAVNGLGSGLSSKFTSINSSI 53
>gi|293391335|ref|ZP_06635669.1| fimbrial protein Flp precursor [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|15487345|dbj|BAB64544.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702512|gb|AAL93276.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702514|gb|AAL93277.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702518|gb|AAL93279.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702520|gb|AAL93280.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|32452619|gb|AAP43981.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|290951869|gb|EFE01988.1| fimbrial protein Flp precursor [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 75
Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGG---KLTAVFADISSKLNPKS 58
+++F ++++G TAIEYGL+A +AV I+A + GG KL + F D++S ++ S
Sbjct: 17 IRSFKKNQAGVTAIEYGLIAIAVAVLIVAVFYSEGGFIAKLQSKFNDLTSTISSAS 72
>gi|192290480|ref|YP_001991085.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|192284229|gb|ACF00610.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 54
Score = 41.2 bits (95), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F D GATAIEY ++A+ +++ I+ VTTLG L + +S +
Sbjct: 3 RLISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSEAMK 54
>gi|322434110|ref|YP_004216322.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9]
gi|321161837|gb|ADW67542.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 41.2 bits (95), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 3 MHIVKNF----LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M+ K+F LQDESG IEY L+A LI + + ++T L GK+ + F + S L
Sbjct: 1 MNKTKSFFFDLLQDESGQDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSVGSSL 56
>gi|315121894|ref|YP_004062383.1| hypothetical protein CKC_00720 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495296|gb|ADR51895.1| hypothetical protein CKC_00720 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 44
Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVA 31
MK I++NFLQD+S AT + YGL +LIAVA
Sbjct: 1 MKFDIIRNFLQDKSSAT-VRYGLFVALIAVA 30
>gi|304320644|ref|YP_003854287.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis
HTCC2503]
gi|303299546|gb|ADM09145.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis
HTCC2503]
Length = 60
Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 41/51 (80%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ F++DE GATAIEYGL+A+LIAVAII++V++LG ++ F D+++ L
Sbjct: 3 NLFNRFVKDEDGATAIEYGLIAALIAVAIISAVSSLGTRIQGAFDDVNTTL 53
>gi|317154608|ref|YP_004122656.1| Flp/Fap pilin component [Desulfovibrio aespoeensis Aspo-2]
gi|316944859|gb|ADU63910.1| Flp/Fap pilin component [Desulfovibrio aespoeensis Aspo-2]
Length = 60
Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 39/53 (73%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M + N + +E GATA+EYGLLA+LIA AI+ +VTTLGG ++ F+ I++ +
Sbjct: 1 MSKIMNLIMNEEGATALEYGLLAALIAAAIVGAVTTLGGVVSTTFSSIATSMQ 53
>gi|28899197|ref|NP_798802.1| putative fimbrial protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153836832|ref|ZP_01989499.1| putative fimbrial protein [Vibrio parahaemolyticus AQ3810]
gi|260361565|ref|ZP_05774592.1| putative fimbrial protein [Vibrio parahaemolyticus K5030]
gi|260876722|ref|ZP_05889077.1| putative fimbrial protein [Vibrio parahaemolyticus AN-5034]
gi|260898199|ref|ZP_05906695.1| putative fimbrial protein [Vibrio parahaemolyticus Peru-466]
gi|260900393|ref|ZP_05908788.1| putative fimbrial protein [Vibrio parahaemolyticus AQ4037]
gi|28807421|dbj|BAC60686.1| putative fimbrial protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149749978|gb|EDM60723.1| putative fimbrial protein [Vibrio parahaemolyticus AQ3810]
gi|308089071|gb|EFO38766.1| putative fimbrial protein [Vibrio parahaemolyticus Peru-466]
gi|308091431|gb|EFO41126.1| putative fimbrial protein [Vibrio parahaemolyticus AN-5034]
gi|308109139|gb|EFO46679.1| putative fimbrial protein [Vibrio parahaemolyticus AQ4037]
gi|308113986|gb|EFO51526.1| putative fimbrial protein [Vibrio parahaemolyticus K5030]
Length = 57
Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIAS--VTTLGGKLTAVFADIS 51
+++K+F++DE G T +EY L A+LI A + S TTL GK T+V + I+
Sbjct: 6 NLIKDFMEDEEGLTLLEYILGAALIVTAFLTSGFWTTLAGKFTSVASQIN 55
>gi|149184276|ref|ZP_01862594.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21]
gi|148831596|gb|EDL50029.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21]
Length = 60
Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ +K DE GATA+EYGL+ +LI V+I+ +V+T G ++ +SS ++
Sbjct: 2 VQFLKKLGHDERGATAVEYGLILALIFVSIMGAVSTFGETTIDMWNTVSSAVS 54
>gi|258405295|ref|YP_003198037.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
gi|257797522|gb|ACV68459.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
Length = 56
Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
F DE GATA EY ++ SLIAV II +VT LG +F++ ++
Sbjct: 8 FFFDEQGATATEYAIMISLIAVVIIVAVTALGLATNDLFSEAKNEF 53
>gi|225872751|ref|YP_002754208.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC
51196]
gi|225793767|gb|ACO33857.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC
51196]
Length = 106
Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ N LQDESG IEY L+A+LI +A +A+++ + + F ++++L
Sbjct: 52 VLNNLLQDESGQDLIEYALVAALIGLAAVAAMSGVANGIKNAFNSVNNQL 101
>gi|27378229|ref|NP_769758.1| PilA2 pilus assembly protein [Bradyrhizobium japonicum USDA 110]
gi|27351376|dbj|BAC48383.1| bsl3118 [Bradyrhizobium japonicum USDA 110]
Length = 54
Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKL 43
M ++K+FL DES ATAIEY L+A+ IA+ I+ V G L
Sbjct: 1 MALLKSFLADESAATAIEYCLIAAGIALVIVTVVNNTGSAL 41
>gi|90423304|ref|YP_531674.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90105318|gb|ABD87355.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 54
Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 35/52 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ FL D SGAT++EY L+A+ +++ I+ +V T+G +TA + + S ++
Sbjct: 3 RLLCKFLGDRSGATSLEYALIAAGLSIVILGAVQTIGTAVTAKYTSVGSAIH 54
>gi|220913387|ref|YP_002488696.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860265|gb|ACL40607.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 71
Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ ++F + E GATA EYG+L + +A A++ V+ G L + D++S L
Sbjct: 13 LRTFRHFNRSEKGATATEYGILVAFLAFALVLGVSAFGQALNLHYQDMTSDLR 65
>gi|163751740|ref|ZP_02158958.1| hypothetical protein KT99_12224 [Shewanella benthica KT99]
gi|161328392|gb|EDP99551.1| hypothetical protein KT99_12224 [Shewanella benthica KT99]
Length = 62
Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I +F++DESG TA+EY + L+ +IA+ TLG TA ++S +N S
Sbjct: 5 QIFADFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGTNATAKINCLASAVNGVS 59
>gi|218893399|ref|YP_002442268.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58]
gi|218773627|emb|CAW29441.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58]
Length = 70
Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIA--SVTTLG--GKLTAVFADISSKLN 55
++ FL DE GA AIEY ++A LIAVA+IA S T G G L A F + +K+
Sbjct: 12 LRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVG 65
>gi|260892921|ref|YP_003239018.1| Flp/Fap pilin component [Ammonifex degensii KC4]
gi|260865062|gb|ACX52168.1| Flp/Fap pilin component [Ammonifex degensii KC4]
Length = 57
Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+ +DE G EYGL+ +LIA+ +I ++T LG + F +S +LN
Sbjct: 6 RELWRDEEGQGMAEYGLILALIAIVVIIALTALGTSIRDKFQKVSDELNK 55
>gi|218673962|ref|ZP_03523631.1| putative pilus component protein [Rhizobium etli GR56]
Length = 62
Score = 40.8 bits (94), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGG 41
M ++K FL D +GATA+EYGL+A++I A+++ + G
Sbjct: 1 MRLLKAFLADGTGATAVEYGLIAAVICTALVSGLGLFSG 39
>gi|91977982|ref|YP_570641.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91684438|gb|ABE40740.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 78
Score = 40.8 bits (94), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 40/51 (78%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+I+ F++DESGATAIEYGL+A+ IA+AIIA+V LG L A F +SS+L
Sbjct: 27 NILARFVKDESGATAIEYGLIAAGIALAIIAAVNGLGTALNARFGSVSSQL 77
>gi|303241716|ref|ZP_07328213.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|303241717|ref|ZP_07328214.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|302590717|gb|EFL60468.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|302590718|gb|EFL60469.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
Length = 60
Score = 40.4 bits (93), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 1 MKMHI--VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
MKM+ +K + ++ G +EYGL+ SLIAVA IA++ LG K+ +F +++ +
Sbjct: 2 MKMYFDYLKALVGNKKGQGMVEYGLIISLIAVACIAALVVLGPKIATLFNGVANSI 57
>gi|327540757|gb|EGF27324.1| Flp/Fap pilin component [Rhodopirellula baltica WH47]
Length = 59
Score = 40.4 bits (93), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFAD 49
FL++E G TA+EY +L +LI V I +VTT+G A F +
Sbjct: 11 FLKEEDGPTAVEYAVLLALIIVVCIGAVTTIGSNANAKFGE 51
>gi|94309596|ref|YP_582806.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353448|gb|ABF07537.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 40.4 bits (93), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ F +D G T+IEY LL +LIA+ II +V+ LG L A++ +++++
Sbjct: 7 MCDTFRRDTRGVTSIEYALLGALIAMVIIGAVSLLGTNLKALYDMVAAEV 56
>gi|114797894|ref|YP_761847.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444]
gi|114738068|gb|ABI76193.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444]
Length = 59
Score = 40.4 bits (93), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 11 QDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+DE GATAIEYGL+A L+ +AII VT ++ + L
Sbjct: 13 RDERGATAIEYGLIAGLMVLAIIGGVTAFADANNEIYQTVEDNL 56
>gi|170744075|ref|YP_001772730.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46]
gi|168198349|gb|ACA20296.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46]
Length = 66
Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 35/54 (64%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ V+ FL D SG+TAIEY ++A I +A++ ++ G + ++A+ SS++
Sbjct: 6 LRAKTVRLFLCDSSGSTAIEYVMIAGFIFLALVGGLSLYGNQTGNLYANFSSQV 59
>gi|218530763|ref|YP_002421579.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
gi|218523066|gb|ACK83651.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
Length = 56
Score = 40.4 bits (93), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADI 50
F + ESGATAIEYGL ++ I +A+I + G L + F I
Sbjct: 7 RFARHESGATAIEYGLASTFIGIAVIGAFRAYGTALGSFFPKI 49
>gi|258405296|ref|YP_003198038.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
gi|257797523|gb|ACV68460.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
Length = 56
Score = 40.4 bits (93), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M + NF + E GATA+EYGL+ +LIA+ IIA+VT LG L +F ++++K++
Sbjct: 1 MDKLMNFFRAEEGATAVEYGLMVALIAIVIIAAVTFLGNSLNNIFNEVANKVD 53
>gi|295690801|ref|YP_003594494.1| hypothetical protein Cseg_3444 [Caulobacter segnis ATCC 21756]
gi|295432704|gb|ADG11876.1| hypothetical protein Cseg_3444 [Caulobacter segnis ATCC 21756]
Length = 56
Score = 40.4 bits (93), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG 40
H++K F +DESG I+YGL ++IAV VT LG
Sbjct: 3 HLIKAFAKDESGVAGIQYGLFVAVIAVITTVCVTGLG 39
>gi|254239024|ref|ZP_04932347.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719]
gi|254244883|ref|ZP_04938205.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192]
gi|126170955|gb|EAZ56466.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719]
gi|126198261|gb|EAZ62324.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192]
Length = 72
Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIA--SVTTLG--GKLTAVFADISSKLN 55
++ FL DE GA AIEY ++A LIAVA+IA S T G G L A F + K+
Sbjct: 12 LRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVG 65
>gi|152985381|ref|YP_001350209.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7]
gi|150960539|gb|ABR82564.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7]
Length = 72
Score = 40.0 bits (92), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIA--SVTTLG--GKLTAVFADISSKLN 55
+ FL DE GA AIEY ++A LIAVA+IA S T G G L A F + K+
Sbjct: 13 RAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVG 65
>gi|330953051|gb|EGH53311.1| hypothetical protein PSYCIT7_17084 [Pseudomonas syringae Cit 7]
Length = 68
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 32/45 (71%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADI 50
+++FL+D+ GA+AIEY ++ +++A+ + A VT +G + A F I
Sbjct: 14 IQSFLKDKEGASAIEYAVIVAMVALVLFAMVTPMGDAVKAQFNKI 58
>gi|322434101|ref|YP_004216313.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
gi|321161828|gb|ADW67533.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++ L DESG IEY L+A LI + + ++T L GK+ + F + S L
Sbjct: 6 NVIAALLNDESGQDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSVGSSL 56
>gi|260462609|ref|ZP_05810815.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259031515|gb|EEW32785.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 64
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
M + + F DE+GA +EY +L +I VA+IA+V +G ++ + ++S L S
Sbjct: 5 MTMTRQFRDDENGAAMVEYTVLLGIITVAVIATVALVGTWVSGKWVTLNSTLTTSS 60
>gi|296283731|ref|ZP_06861729.1| hypothetical protein CbatJ_08919 [Citromicrobium bathyomarinum
JL354]
Length = 57
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
M + + D+ GATAIEYGL+A+LIAVA I ++ +LG +L+ F +S+ + PK+
Sbjct: 1 MKFFRELMNDDQGATAIEYGLIAALIAVAAITAMGSLGNQLSNTFTTVSTDMAPKA 56
>gi|219848813|ref|YP_002463246.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485]
gi|219543072|gb|ACL24810.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485]
Length = 52
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++++F E G +EY L+ LIAV +I ++T LG ++ +F+ ++ + P
Sbjct: 1 MLRSFFAKEEGQGLVEYALILVLIAVVVIGALTALGTNISGLFSQLADTIQP 52
>gi|119717345|ref|YP_924310.1| Flp/Fap pilin component [Nocardioides sp. JS614]
gi|119538006|gb|ABL82623.1| Flp/Fap pilin component [Nocardioides sp. JS614]
Length = 67
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 12 DESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
DE GA+A+EYGLL IA I+ V LG ++ +F D + + K+
Sbjct: 17 DERGASAVEYGLLIGGIAAVIVVLVFALGDQVKELFTDTCTSVEAKT 63
>gi|330873639|gb|EGH07788.1| hypothetical protein PSYMP_04385 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330963440|gb|EGH63700.1| hypothetical protein PSYAC_02082 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 68
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 34/49 (69%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++FL+D+ A+AIEY ++ +++A+ + A VT +G + A F +I + L
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGTAIKARFNEIITAL 62
>gi|119962026|ref|YP_948616.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1]
gi|119948885|gb|ABM07796.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1]
Length = 65
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLG 40
F +E GATA+EYGLL +LIA I+ +V LG
Sbjct: 18 RFTNEEKGATAVEYGLLVALIAALIVGTVVLLG 50
>gi|116748926|ref|YP_845613.1| Flp/Fap pilin component [Syntrophobacter fumaroxidans MPOB]
gi|116697990|gb|ABK17178.1| Flp/Fap pilin component [Syntrophobacter fumaroxidans MPOB]
Length = 57
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 39/46 (84%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
FL+DE G TAIEYGL+A+LIAVAII +VT++G LTAVF ++++L
Sbjct: 7 FLKDEEGVTAIEYGLIAALIAVAIIVAVTSVGTNLTAVFNRVAAEL 52
>gi|170692569|ref|ZP_02883731.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170142225|gb|EDT10391.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 57
Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
K F++DE G TAIEYGL+A+LIA AI+A TTL ++A F I+ KL
Sbjct: 9 KAFIRDEDGVTAIEYGLMAALIATAILAGYTTLANAVSAKFTAIAGKL 56
>gi|53723202|ref|YP_112187.1| pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76818517|ref|YP_336463.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|126444256|ref|YP_001064071.1| putative pilus subunit protein [Burkholderia pseudomallei 668]
gi|126456774|ref|YP_001076983.1| putative pilus subunit protein [Burkholderia pseudomallei 1106a]
gi|134281902|ref|ZP_01768609.1| putative pilus subunit protein [Burkholderia pseudomallei 305]
gi|167725240|ref|ZP_02408476.1| putative pilus subunit protein [Burkholderia pseudomallei DM98]
gi|167744170|ref|ZP_02416944.1| putative pilus subunit protein [Burkholderia pseudomallei 14]
gi|167821369|ref|ZP_02453049.1| putative pilus subunit protein [Burkholderia pseudomallei 91]
gi|167829708|ref|ZP_02461179.1| putative pilus subunit protein [Burkholderia pseudomallei 9]
gi|167851177|ref|ZP_02476685.1| putative pilus subunit protein [Burkholderia pseudomallei B7210]
gi|167899808|ref|ZP_02487209.1| putative pilus subunit protein [Burkholderia pseudomallei 7894]
gi|167908124|ref|ZP_02495329.1| putative pilus subunit protein [Burkholderia pseudomallei NCTC
13177]
gi|167916471|ref|ZP_02503562.1| putative pilus subunit protein [Burkholderia pseudomallei 112]
gi|167924327|ref|ZP_02511418.1| putative pilus subunit protein [Burkholderia pseudomallei BCC215]
gi|217424250|ref|ZP_03455749.1| putative pilus subunit protein [Burkholderia pseudomallei 576]
gi|226194052|ref|ZP_03789653.1| putative pilus subunit protein [Burkholderia pseudomallei
Pakistan 9]
gi|237509208|ref|ZP_04521923.1| putative pilin [Burkholderia pseudomallei MSHR346]
gi|242312447|ref|ZP_04811464.1| putative pilus subunit protein [Burkholderia pseudomallei 1106b]
gi|254182589|ref|ZP_04889183.1| putative pilus subunit protein [Burkholderia pseudomallei 1655]
gi|254187140|ref|ZP_04893655.1| putative pilus subunit protein [Burkholderia pseudomallei Pasteur
52237]
gi|254192539|ref|ZP_04898978.1| putative pilus subunit protein [Burkholderia pseudomallei S13]
gi|254262622|ref|ZP_04953487.1| putative pilus subunit protein [Burkholderia pseudomallei 1710a]
gi|254296479|ref|ZP_04963935.1| putative pilus subunit protein [Burkholderia pseudomallei 406e]
gi|52213616|emb|CAH39670.1| putative pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76582990|gb|ABA52464.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|126223747|gb|ABN87252.1| putative pilus subunit protein [Burkholderia pseudomallei 668]
gi|126230542|gb|ABN93955.1| putative pilus subunit protein [Burkholderia pseudomallei 1106a]
gi|134246964|gb|EBA47051.1| putative pilus subunit protein [Burkholderia pseudomallei 305]
gi|157806367|gb|EDO83537.1| putative pilus subunit protein [Burkholderia pseudomallei 406e]
gi|157934823|gb|EDO90493.1| putative pilus subunit protein [Burkholderia pseudomallei Pasteur
52237]
gi|169649297|gb|EDS81990.1| putative pilus subunit protein [Burkholderia pseudomallei S13]
gi|184213124|gb|EDU10167.1| putative pilus subunit protein [Burkholderia pseudomallei 1655]
gi|217392715|gb|EEC32738.1| putative pilus subunit protein [Burkholderia pseudomallei 576]
gi|225933997|gb|EEH29983.1| putative pilus subunit protein [Burkholderia pseudomallei
Pakistan 9]
gi|235001413|gb|EEP50837.1| putative pilin [Burkholderia pseudomallei MSHR346]
gi|242135686|gb|EES22089.1| putative pilus subunit protein [Burkholderia pseudomallei 1106b]
gi|254213624|gb|EET03009.1| putative pilus subunit protein [Burkholderia pseudomallei 1710a]
Length = 56
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ VK F++DE G +AIEYGL+A+LIA+ II +V T+G L +VF+ I + L
Sbjct: 5 VQYVKQFVRDEGGVSAIEYGLIAALIAIVIIGAVKTVGTNLNSVFSTIGNDL 56
>gi|255262164|ref|ZP_05341506.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62]
gi|255104499|gb|EET47173.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62]
Length = 90
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 15 GATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
GA IEYGLL L+AV SV+TLG ++ FA+++++L+
Sbjct: 28 GAALIEYGLLVGLVAVVANGSVSTLGEEIDGTFANVTAELS 68
>gi|220927008|ref|YP_002502310.1| hypothetical protein Mnod_7268 [Methylobacterium nodulans ORS
2060]
gi|219951615|gb|ACL62007.1| conserved hypothetical protein [Methylobacterium nodulans ORS
2060]
Length = 66
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 33/54 (61%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ V+ FL D +G+TAIEY ++A LI +A+ S+ G +++ + +K+
Sbjct: 6 LRARSVRRFLNDGAGSTAIEYAMIAGLIFLAVAVSLNLYGASTGSLYTSLGNKV 59
>gi|149184275|ref|ZP_01862593.1| hypothetical protein ED21_26193 [Erythrobacter sp. SD-21]
gi|148831595|gb|EDL50028.1| hypothetical protein ED21_26193 [Erythrobacter sp. SD-21]
Length = 60
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M + ++E GATAIEYGL+A+LIAVA I ++ +LGG+LT F +SS +
Sbjct: 1 MKFINKLRRNEEGATAIEYGLIAALIAVAAITAMQSLGGELTTTFNTVSSAM 52
>gi|316933042|ref|YP_004108024.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
gi|315600756|gb|ADU43291.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
Length = 55
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+IV F++DESGATAIEYGL+A+ IA+AIIA+V +GG+L+ F I +L
Sbjct: 3 NIVARFIKDESGATAIEYGLIAAGIALAIIAAVQGVGGQLSTNFTKIKDEL 53
>gi|28871964|ref|NP_794583.1| hypothetical protein PSPTO_4849 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213968018|ref|ZP_03396164.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv.
tomato T1]
gi|301383666|ref|ZP_07232084.1| hypothetical protein PsyrptM_13578 [Pseudomonas syringae pv.
tomato Max13]
gi|302059965|ref|ZP_07251506.1| hypothetical protein PsyrptK_08235 [Pseudomonas syringae pv.
tomato K40]
gi|302131631|ref|ZP_07257621.1| hypothetical protein PsyrptN_09572 [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|28855217|gb|AAO58278.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213927361|gb|EEB60910.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv.
tomato T1]
gi|331014710|gb|EGH94766.1| hypothetical protein PLA106_02360 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 68
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++FL+D+ A+AIEY ++ +++A+ + A VT +G + A F +I L
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGTAIKARFNEIIEAL 62
>gi|239833240|ref|ZP_04681569.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301]
gi|239825507|gb|EEQ97075.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301]
Length = 107
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ F+++ +G+TAIEY L+ +L+++AII+ V + G + F + + +
Sbjct: 52 LMTRFMKNRAGSTAIEYALIGTLVSIAIISGVALMAGSVGDKFNETARQF 101
>gi|294140770|ref|YP_003556748.1| Flp/Fap pilin component superfamily [Shewanella violacea DSS12]
gi|293327239|dbj|BAJ01970.1| Flp/Fap pilin component superfamily [Shewanella violacea DSS12]
Length = 64
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I +F++DESG TA+EY + L+ +IA+ LG T+ + ++S +N S
Sbjct: 5 QIFSDFIEDESGLTAVEYAIAGGLVVGGMIAAFNQLGTNATSKISCLASAVNGAS 59
>gi|116878542|ref|YP_842256.1| hypothetical protein Pcar_3316 [Pelobacter carbinolicus DSM 2380]
gi|114843178|gb|ABI81935.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 175
Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ ++ E GATA EY ++ +LI + I ++T LG K+ F +I+ L
Sbjct: 124 RELIRSEEGATATEYAVMLALIIIVAIGAITFLGKKVNNTFQNIAESL 171
>gi|13475419|ref|NP_106983.1| pilin subunit [Mesorhizobium loti MAFF303099]
gi|14026171|dbj|BAB52769.1| pilin subunit [Mesorhizobium loti MAFF303099]
Length = 87
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M + + F DE+GA +EY +L +I VA+IA+V +G ++ + ++S L
Sbjct: 31 MTMTRQFRDDENGAAMVEYTVLLGIITVAVIATVVLVGTWVSGRWTALNSALT 83
>gi|170701159|ref|ZP_02892132.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133940|gb|EDT02295.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 68
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
++ DE G T+IEY L+A++ A ++ASV TL L ++ I+S
Sbjct: 12 RWIDDEQGVTSIEYALIAAMFATVVLASVVTLKDSLEDMYNMIAS 56
>gi|170703400|ref|ZP_02894177.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|171317756|ref|ZP_02906938.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
gi|170131689|gb|EDT00240.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|171097106|gb|EDT41959.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
Length = 59
Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGK--LTAVFADISSKLNP 56
+ VK+ L+DE G +++EY +LA +I VA+ A T L G L A+F + +K+
Sbjct: 2 LQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTYLSGTTGLQAIFTQLVNKVTS 57
>gi|188586931|ref|YP_001918476.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351618|gb|ACB85888.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 69
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+K +E G +EYGL+ +L+AV +I +++ LG + +F I+ ++ ++
Sbjct: 5 LKRLWTEEDGQGMVEYGLILALVAVVVIGALSFLGDNVAGIFEHITDEVGDET 57
>gi|241662168|ref|YP_002980528.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|309780763|ref|ZP_07675504.1| pilin transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|240864195|gb|ACS61856.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|308920445|gb|EFP66101.1| pilin transmembrane protein [Ralstonia sp. 5_7_47FAA]
Length = 58
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 36/51 (70%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++K F+++E GA +EY LL + +A+ ++AS T+ + ++++ I+++L+
Sbjct: 4 MIKRFVREEDGAAGVEYALLLAFVALVMVASGPTVKAAVGSIWSTIATQLS 54
>gi|254780736|ref|YP_003065149.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040413|gb|ACT57209.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 60
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL-NPKS 58
++ + L+DESGA AIEYG+L +LIAVAIIA+VT LGG L F + ++++ N KS
Sbjct: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
>gi|225182001|ref|ZP_03735433.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225167286|gb|EEG76105.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 59
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 31/54 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+V+ F +ESG EY L+ +L+++ I ++ +GG++ +F I+ + +
Sbjct: 3 EMVRRFFTEESGQGMTEYALILALVSIVAIGALFAMGGRIEEIFEQITGSFSGE 56
>gi|86750604|ref|YP_487100.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
gi|86573632|gb|ABD08189.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
Length = 54
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ F SGATAIEY L+A+ +++ I+ +V LG KL + +++ L
Sbjct: 3 RLISRFTCGTSGATAIEYALIAAGLSIVILVTVNGLGSKLNTSYTSVNTAL 53
>gi|85373827|ref|YP_457889.1| hypothetical protein ELI_05000 [Erythrobacter litoralis HTCC2594]
gi|84786910|gb|ABC63092.1| hypothetical protein ELI_05000 [Erythrobacter litoralis HTCC2594]
Length = 54
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M N ++DE GATAIEYGL+A+LIAVA I ++ LG +L+ F+ +S+ +
Sbjct: 1 MKFFNNLMKDEQGATAIEYGLIAALIAVAAIVAMQGLGNQLSNTFSSVSTTM 52
>gi|83717167|ref|YP_440451.1| PilA-like protein [Burkholderia thailandensis E264]
gi|167579108|ref|ZP_02371982.1| PilA-related protein [Burkholderia thailandensis TXDOH]
gi|167617223|ref|ZP_02385854.1| PilA-related protein [Burkholderia thailandensis Bt4]
gi|257141098|ref|ZP_05589360.1| PilA-related protein [Burkholderia thailandensis E264]
gi|83650992|gb|ABC35056.1| PilA-related protein [Burkholderia thailandensis E264]
Length = 56
Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ VK F+++E G +AIEYGL+A+LIA+ II +V T+G L +VF+ I S L
Sbjct: 5 VQYVKQFVREEGGVSAIEYGLIAALIAIVIIGAVKTVGTNLNSVFSTIGSDL 56
>gi|163846875|ref|YP_001634919.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl]
gi|163668164|gb|ABY34530.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl]
Length = 55
Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++++F E G +EY L+ LIAV +I ++T LG ++ +F +++ + P
Sbjct: 4 MLRSFFAKEEGQGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTIQP 55
>gi|87199922|ref|YP_497179.1| Flp/Fap pilin component [Novosphingobium aromaticivorans DSM
12444]
gi|87135603|gb|ABD26345.1| Flp/Fap pilin component [Novosphingobium aromaticivorans DSM
12444]
Length = 59
Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 41/56 (73%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
M + +N L + GATAIEYGL+A+L+AVA I ++++LG L+ F ++S++++ S
Sbjct: 1 MKLFRNLLANNEGATAIEYGLIAALVAVAAIGAMSSLGTSLSTTFNNVSTEMDNAS 56
>gi|296282443|ref|ZP_06860441.1| hypothetical protein CbatJ_02425 [Citromicrobium bathyomarinum
JL354]
Length = 82
Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG 40
M I ++ L+DE+G +AIEY ++ +LI V ++ ++ LG
Sbjct: 1 MMITRHLLRDETGTSAIEYAVIMALIGVGLVGALNALG 38
>gi|222524696|ref|YP_002569167.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl]
gi|222448575|gb|ACM52841.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl]
Length = 52
Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++++F E G +EY L+ LIAV +I ++T LG ++ +F +++ + P
Sbjct: 1 MLRSFFAKEEGQGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTIQP 52
>gi|115358168|ref|YP_775306.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115283456|gb|ABI88972.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 59
Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGK--LTAVFADISSKLNP 56
+ VK+ L+DE G +++EY +LA +I VA+ A T L G L A+F + +K++
Sbjct: 2 LQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTYLSGTSGLQAIFTSLINKVSS 57
>gi|170720036|ref|YP_001747724.1| Flp/Fap pilin component [Pseudomonas putida W619]
gi|169758039|gb|ACA71355.1| Flp/Fap pilin component [Pseudomonas putida W619]
Length = 59
Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
K FL + GA+ IEY ++A+++AV + V + G ++ +F I + LN
Sbjct: 11 KQFLHRKDGASGIEYAVIAAMVAVILAGFVPGISGNISTMFTAIQTALN 59
>gi|116878541|ref|YP_842255.1| hypothetical protein Pcar_3315 [Pelobacter carbinolicus DSM 2380]
gi|114843177|gb|ABI81934.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 59
Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 32/51 (62%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSK 53
M +++ + E GAT+ EY ++ +LI + IA+++ LG K+ F D++ +
Sbjct: 5 MSKLRDLVWKEEGATSPEYAVMLALIIIVCIAAISYLGKKVNNTFNDMAQQ 55
>gi|296132735|ref|YP_003639982.1| Flp/Fap pilin component [Thermincola sp. JR]
gi|296031313|gb|ADG82081.1| Flp/Fap pilin component [Thermincola potens JR]
Length = 54
Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
M V FL +E+G + EY L+ SLI V ++ + + G +++ +F++ S+++N
Sbjct: 1 MLTVTRFLVEENGQSLTEYALVLSLIVVTVVGILLSFGFRISNLFSNASAQINQ 54
>gi|227819049|ref|YP_002823020.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234]
gi|227338048|gb|ACP22267.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234]
Length = 51
Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLG 40
F++ ESGATAIEYGL+ LIAV I +V T+G
Sbjct: 7 RFVRHESGATAIEYGLITGLIAV--ITAVQTVG 37
>gi|307293402|ref|ZP_07573248.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
gi|306881468|gb|EFN12684.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
Length = 53
Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M ++ L++E GATAIEYGL+A+LIAVA I +++T+G L F ++++ L
Sbjct: 1 MQFIRKMLKNEKGATAIEYGLIAALIAVAAIGAMSTIGTNLKGTFNNVATNL 52
>gi|209515948|ref|ZP_03264809.1| Flp/Fap pilin component [Burkholderia sp. H160]
gi|209503606|gb|EEA03601.1| Flp/Fap pilin component [Burkholderia sp. H160]
Length = 62
Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG---GKLTAVFADISSKL 54
+ +K+ +DE G +A+EY +LA ++ +A++A+ + G G L A+F ++ +K+
Sbjct: 2 LQFIKSLSRDERGVSALEYAVLAGIVVIAVVAAGSIFGSTTGGLPALFQNMITKV 56
>gi|90411210|ref|ZP_01219223.1| hypothetical protein P3TCK_06577 [Photobacterium profundum 3TCK]
gi|90328056|gb|EAS44377.1| hypothetical protein P3TCK_06577 [Photobacterium profundum 3TCK]
Length = 57
Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTA 45
F +DE G T +EY + SL+ A++ + T+LG K+T+
Sbjct: 10 EFWKDEEGLTTVEYAIAGSLVGAAVVGAFTSLGEKVTS 47
>gi|229588197|ref|YP_002870316.1| hypothetical protein PFLU0649 [Pseudomonas fluorescens SBW25]
gi|229360063|emb|CAY46917.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 63
Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 32/47 (68%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
F Q + GA+ IEY ++ +++A+ I+ + + LG K+ ++F +++K+
Sbjct: 16 FFQRKEGASGIEYAIIVAMVALVIVGAGSGLGTKIKSIFDSVATKMT 62
>gi|254522212|ref|ZP_05134267.1| Flp/Fap pilin component superfamily protein [Stenotrophomonas sp.
SKA14]
gi|219719803|gb|EED38328.1| Flp/Fap pilin component superfamily protein [Stenotrophomonas sp.
SKA14]
Length = 62
Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 24/29 (82%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIA 34
++ FL++E G TA+EYGLLA++IA +IA
Sbjct: 5 IRTFLKEEDGVTALEYGLLAAVIAGVLIA 33
>gi|27382252|ref|NP_773781.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
gi|27355423|dbj|BAC52406.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
Length = 78
Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++V F++DESGATAIEYGL+A+ IA+AII V LG L F IS+ L
Sbjct: 27 NLVARFVKDESGATAIEYGLIAAGIALAIITVVNNLGSTLNTKFTSISTSL 77
>gi|194366093|ref|YP_002028703.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3]
gi|194348897|gb|ACF52020.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3]
Length = 63
Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 24/29 (82%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIA 34
++ FL++E G TA+EYGLLA++IA +IA
Sbjct: 5 IRRFLKEEDGVTALEYGLLAAVIAGVLIA 33
>gi|33152390|ref|NP_873743.1| flp operon protein Flp2 [Haemophilus ducreyi 35000HP]
gi|21326703|gb|AAL92463.1| Flp2 [Haemophilus ducreyi]
gi|33148613|gb|AAP96132.1| flp operon protein Flp2 [Haemophilus ducreyi 35000HP]
Length = 81
Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGG---KLTAVFADISSKLNPKS 58
++ F +++ G TAIEYGL+A +A+ IIA G KL F+D+++ ++ +S
Sbjct: 21 IQRFRKNQQGVTAIEYGLIAVAVAILIIAVFYNNQGFLMKLKTKFSDLATGISAQS 76
>gi|52425837|ref|YP_088974.1| hypothetical protein MS1782 [Mannheimia succiniciproducens
MBEL55E]
gi|52307889|gb|AAU38389.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 75
Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 6 VKNFLQDESGATAIEYGLLASLIA---VAIIASVTTLGGKLTAVFADIS 51
++ F QD G TAIEYGL+A ++A V + A T+ L F+D+S
Sbjct: 17 IRRFKQDHKGVTAIEYGLIAVVMAAFIVYVFADDTSFVQSLKEKFSDVS 65
>gi|283769327|ref|ZP_06342226.1| Flp/Fap pilin component [Bulleidia extructa W1219]
gi|283103984|gb|EFC05368.1| Flp/Fap pilin component [Bulleidia extructa W1219]
Length = 56
Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 6 VKNFL----QDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+KNF+ ++ESG +EYGL+ +LIAV +I ++ + G + F I++ L
Sbjct: 1 MKNFMNWFTEEESGQGMVEYGLIIALIAVVLIVALQAMQGGIANTFQAITNAL 53
>gi|87312297|ref|ZP_01094395.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645]
gi|87285001|gb|EAQ76937.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645]
Length = 67
Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++NFL E G TA+EY ++ +LI + + ++ +G + A F I + +
Sbjct: 8 IQNFLVSEDGPTAVEYAVMLALIVIVCLTAIQAIGTQANATFTKIGNDM 56
>gi|150397710|ref|YP_001328177.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419]
gi|150029225|gb|ABR61342.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 57
Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAII 33
M +K +D GAT +EYGLLA+LI+V ++
Sbjct: 1 METLKRLFEDRDGATVVEYGLLAALISVGLL 31
>gi|149173516|ref|ZP_01852146.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797]
gi|148847698|gb|EDL62031.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797]
Length = 57
Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M +K FL +E G TA+EY ++ + I + IA++ +G + +F + ++++
Sbjct: 1 MQYLKRFLIEEDGPTAVEYAVMLAAIVMVCIAAIAAIGTRTNDLFENATTEMQ 53
>gi|289675701|ref|ZP_06496591.1| hypothetical protein PsyrpsF_20686 [Pseudomonas syringae pv.
syringae FF5]
Length = 68
Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 31/45 (68%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADI 50
+++FL+D+ A+AIEY ++ +++A+ + A VT +G + A F I
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGDAVKAQFNKI 58
>gi|153008056|ref|YP_001369271.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
gi|151559944|gb|ABS13442.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
Length = 60
Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFAD 49
++ F+++ +G+TAIEY L+ +L+++ II+ V + G + F D
Sbjct: 5 LMTRFMKNRAGSTAIEYALIGTLVSIMIISGVALVAGNVGEKFND 49
>gi|148553540|ref|YP_001261122.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148498730|gb|ABQ66984.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 55
Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M V L++ GATAIEYGL+A+LIAVA I ++T+LG +L F ++S+ +
Sbjct: 1 MKFVAKLLKNNKGATAIEYGLIAALIAVAAITAMTSLGNQLQKTFNNVSNNM 52
>gi|283779849|ref|YP_003370604.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283438302|gb|ADB16744.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 62
Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
V+ FL E G TA+EY ++ +LI + + ++ +G A F +++KL
Sbjct: 8 VQRFLVSEDGPTAVEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKL 56
>gi|16125085|ref|NP_419649.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15]
gi|221233812|ref|YP_002516248.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000]
gi|13422083|gb|AAK22817.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15]
gi|220962984|gb|ACL94340.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000]
Length = 57
Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVF 47
F +D+SGATA+E G++ LI++A+I ++T L + F
Sbjct: 10 FWRDQSGATAVEVGVIVVLISIALIGAITVLSDGIKTAF 48
>gi|158421906|ref|YP_001523198.1| hypothetical protein AZC_0282 [Azorhizobium caulinodans ORS 571]
gi|158328795|dbj|BAF86280.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 54
Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 30/36 (83%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG 40
+++ F+++E G+TA+EYGL+A+ +++AI+ +T +G
Sbjct: 4 LLQRFVKEEHGSTALEYGLIAAGLSIAIVTVLTQVG 39
>gi|77456878|ref|YP_346383.1| Flp/Fap pilin component [Pseudomonas fluorescens Pf0-1]
gi|77380881|gb|ABA72394.1| putative Flp/Fap pilin component [Pseudomonas fluorescens Pf0-1]
Length = 81
Score = 37.4 bits (85), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
K ++D GA+ IEY ++A ++AVA+ A VT + +T +F I + L
Sbjct: 34 KGLVKDTEGASGIEYAIIAGMVAVALAAFVTPISTAITTMFNTIQAAL 81
>gi|238027566|ref|YP_002911797.1| Flp/Fap pilin component [Burkholderia glumae BGR1]
gi|237876760|gb|ACR29093.1| Flp/Fap pilin component [Burkholderia glumae BGR1]
Length = 65
Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ FL++E G TA+EYGL+A L+AVA++A+V L G ++ F+ I+ KL
Sbjct: 4 LINRFLKEEDGVTAVEYGLIAGLMAVALVAAVGVLSGGISNAFSYIAGKL 53
>gi|255613581|ref|XP_002539522.1| conserved hypothetical protein [Ricinus communis]
gi|223505367|gb|EEF22861.1| conserved hypothetical protein [Ricinus communis]
Length = 243
Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++V F++DESGATAIEYGL+A+ IA+AII V LG L F IS+ L
Sbjct: 191 VNLVARFVKDESGATAIEYGLIAAGIALAIITVVNNLGTTLNTKFTSISTSL 242
>gi|225174965|ref|ZP_03728962.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225169605|gb|EEG78402.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 57
Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++ +++E G EYGL+ +A+A+I +T +G L +F++I+ +L
Sbjct: 3 NLMMRLVREEKGQGLAEYGLILVFVALAVIVGLTAVGTNLNTLFSNIAGRL 53
>gi|312882141|ref|ZP_07741890.1| Flp pilus assembly protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370187|gb|EFP97690.1| Flp pilus assembly protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 68
Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLG--GKLTAVFADISSKL 54
F DE G TAIEYGL+A +AV + +V T G G+L F +++ +
Sbjct: 15 QFKNDERGVTAIEYGLIAVAMAVLVTTAVGTEGFIGRLETAFTSVATAI 63
>gi|78186673|ref|YP_374716.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273]
gi|78166575|gb|ABB23673.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273]
Length = 60
Score = 37.4 bits (85), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ + G T IEY L+A+L+AV +I ++ +G LT +F IS L+
Sbjct: 8 ITSQKGVTMIEYALIAALVAVVVITALGLVGENLTTIFTTISDALS 53
>gi|170741514|ref|YP_001770169.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
gi|168195788|gb|ACA17735.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
Length = 51
Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++K+F DESGATAIEYGLLA+LIA+A+IA+ +++G L F +++ L
Sbjct: 1 MIKSFFYDESGATAIEYGLLAALIAIALIAAASSVGTNLGTAFQNVAGNL 50
>gi|84385687|ref|ZP_00988718.1| hypothetical protein V12B01_26174 [Vibrio splendidus 12B01]
gi|84379667|gb|EAP96519.1| hypothetical protein V12B01_26174 [Vibrio splendidus 12B01]
Length = 68
Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLG--GKLTAVFADISSKLNPKS 58
F DE G TAIEYGL+A +AV + +V G GKL A F + + S
Sbjct: 15 QFKNDERGVTAIEYGLIAVAMAVLVTTAVGADGFIGKLEAAFTKVGDAITTAS 67
>gi|3097295|dbj|BAA25886.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|4887579|dbj|BAA77801.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887581|dbj|BAA77802.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887583|dbj|BAA77803.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887585|dbj|BAA77804.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887587|dbj|BAA77805.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887589|dbj|BAA77806.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887591|dbj|BAA77807.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|15487351|dbj|BAB64547.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487357|dbj|BAB64550.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487361|dbj|BAB64552.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702516|gb|AAL93278.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|41352082|gb|AAS00710.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+++F ++++G TAIEYGL+A +AV I+A + G + A++ SK N
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFI----ANLQSKFNS 63
>gi|114797760|ref|YP_761694.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444]
gi|114737934|gb|ABI76059.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444]
Length = 57
Score = 37.4 bits (85), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
FL+DESGATAIEYGL+A+LIAVAII V+ LG ++ F +I +
Sbjct: 4 RFLKDESGATAIEYGLIAALIAVAIIGGVSALGTQVDTTFDEIEKGIR 51
>gi|4887593|dbj|BAA77808.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
Length = 75
Score = 37.4 bits (85), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+++F ++++G TAIEYGL+A +AV I+A + G + A++ SK N
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFI----ANLQSKFNS 63
>gi|261867458|ref|YP_003255380.1| hypothetical protein D11S_0764 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|4887567|dbj|BAA77795.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887569|dbj|BAA77796.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887571|dbj|BAA77797.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887573|dbj|BAA77798.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887575|dbj|BAA77799.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887577|dbj|BAA77800.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|15487343|dbj|BAB64543.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487353|dbj|BAB64548.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487359|dbj|BAB64551.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702510|gb|AAL93275.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702528|gb|AAL93284.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702530|gb|AAL93285.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702532|gb|AAL93286.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702536|gb|AAL93288.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702546|gb|AAL93293.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|261412790|gb|ACX82161.1| hypothetical protein D11S_0764 [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 76
Score = 37.4 bits (85), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+++F ++++G TAIEYGL+A +AV I+A + G + A++ SK N
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFI----ANLQSKFNS 63
>gi|153833206|ref|ZP_01985873.1| conserved domain protein [Vibrio harveyi HY01]
gi|148870477|gb|EDL69392.1| conserved domain protein [Vibrio harveyi HY01]
Length = 68
Score = 37.4 bits (85), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLG--GKLTAVFADISSKLNPKS 58
F DE G TAIEYGL+A +AV + +V + G GKL F ++ ++ S
Sbjct: 15 KFKNDERGVTAIEYGLIAVAMAVLVTTAVGSDGFIGKLEGAFDQVAGAIDTAS 67
>gi|295700373|ref|YP_003608266.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
gi|295439586|gb|ADG18755.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
Length = 56
Score = 37.0 bits (84), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
F+ DE G TAIEYGLLA LIA+ II VTTLG L+A+F +++ +
Sbjct: 11 FMHDEDGVTAIEYGLLAGLIALLIIGGVTTLGTNLSAIFNNLADSV 56
>gi|13474657|ref|NP_106226.1| fimbriae associated protein [Mesorhizobium loti MAFF303099]
gi|14025412|dbj|BAB52012.1| fimbriae associated protein [Mesorhizobium loti MAFF303099]
Length = 58
Score = 37.0 bits (84), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++ F++DESGATAIEYGL+A+LIA+AII LG + + F +I + LN
Sbjct: 3 NLFARFVKDESGATAIEYGLIAALIALAIITGAGALGNAINSKFTNIGTTLNS 55
>gi|12642644|gb|AAK00326.1|AF320002_1 Flp-1 [Aggregatibacter actinomycetemcomitans]
gi|19702492|gb|AAL93266.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702494|gb|AAL93267.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702496|gb|AAL93268.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702500|gb|AAL93270.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|26000708|gb|AAN75204.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352070|gb|AAS00702.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|307548783|dbj|BAJ19105.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+++F ++++G TAIEYGL+A +AV I+A + G + A++ SK N
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFI----ANLQSKFNS 63
>gi|322419948|ref|YP_004199171.1| Flp/Fap pilin component [Geobacter sp. M18]
gi|320126335|gb|ADW13895.1| Flp/Fap pilin component [Geobacter sp. M18]
Length = 64
Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Query: 5 IVKNFLQ----DESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
IV+N L+ ++SG +EY L+ LIA+A+ A V TLG +L + I++ ++
Sbjct: 6 IVRNRLRLVLGNDSGQGLVEYALILVLIAIAVFAMVQTLGVQLNGTYEKINTSVD 60
>gi|299069502|emb|CBJ40771.1| putative Flp/Fap pilin component [Ralstonia solanacearum CMR15]
Length = 58
Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
MK I++ FL+DE GATAIEYGLLA LIA AI A+VTTLG ++ F + + +
Sbjct: 1 MKNAILQ-FLRDEQGATAIEYGLLAGLIAAAIAATVTTLGTEIKTAFGSVCTAI 53
>gi|299131747|ref|ZP_07024942.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
gi|298591884|gb|EFI52084.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
Length = 53
Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
M +K F D+SGAT+IEY ++A+ +++ I+ +V +G L + I +
Sbjct: 1 MKTLKRFFLDQSGATSIEYAIIAAGLSIVILVAVNGIGSALNGKYEMIRA 50
>gi|190574775|ref|YP_001972620.1| putative pilin subunit [Stenotrophomonas maltophilia K279a]
gi|190012697|emb|CAQ46325.1| putative pilin subunit [Stenotrophomonas maltophilia K279a]
Length = 68
Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 24/29 (82%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIA 34
++ FL++E G TA+EYGLLA++IA +IA
Sbjct: 5 IRKFLKEEDGVTALEYGLLAAVIAGILIA 33
>gi|220922530|ref|YP_002497832.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947137|gb|ACL57529.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASV----TTLGGKLTAV 46
M+ + FL+DE GA +EY +L ++ VA+IA++ T + GK TA+
Sbjct: 1 MNRLSKFLRDEDGAALVEYTVLLGILLVAVIATIGGVGTWINGKWTAL 48
>gi|197117448|ref|YP_002137875.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
gi|197086808|gb|ACH38079.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
Length = 64
Score = 37.0 bits (84), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 30/48 (62%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
K L++ +G +EY L+ L+++ +IA++ LG + VF ++S +L
Sbjct: 13 KQVLKNTNGQGLVEYALILVLMSIVVIAALKNLGDETNKVFCNVSDRL 60
>gi|134291861|ref|YP_001115630.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134135050|gb|ABO59375.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 68
Score = 37.0 bits (84), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
V ++ DE G T+IEY LLA++ A ++ +V L G + + I+S
Sbjct: 10 VSRWIDDERGVTSIEYALLAAVFATVVLGAVVALKGSVQGAYDAIAS 56
>gi|260461952|ref|ZP_05810197.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259032199|gb|EEW33465.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 58
Score = 37.0 bits (84), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F++DESGATAIEYGL+A+LIA+AII LG + A F I + LN
Sbjct: 3 NLFARFVKDESGATAIEYGLIAALIALAIITGAGALGNAINAKFTTIGTTLN 54
>gi|330938337|gb|EGH41969.1| hypothetical protein PSYPI_05933 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 68
Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+++FL+D+ A+AIEY ++ +++A+ + A VT +G + F I L K+
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGDAVKGQFNKIIGVLGGKA 66
>gi|322419947|ref|YP_004199170.1| Flp/Fap pilin component [Geobacter sp. M18]
gi|320126334|gb|ADW13894.1| Flp/Fap pilin component [Geobacter sp. M18]
Length = 65
Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
L+ E G +EY L+ LIA+ +IA VT +G VF ++ LN
Sbjct: 19 LKSEKGQGLVEYALILVLIAIVVIAMVTGIGQNANEVFCQVNGALNQ 65
>gi|283779850|ref|YP_003370605.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283438303|gb|ADB16745.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 62
Score = 37.0 bits (84), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 30/50 (60%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ FL+ E G TA+EY ++ +LI + + ++ +G A F +++KL+
Sbjct: 8 IGRFLKSEDGPTAVEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKLS 57
>gi|296121064|ref|YP_003628842.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
gi|296013404|gb|ADG66643.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
Length = 57
Score = 37.0 bits (84), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
VK FL E G TA+EY ++ +LI + + +V +G A F +++ L
Sbjct: 7 VKKFLVSEDGPTAVEYAVMLALIVIVCLTAVQAIGTNAAAKFQNVADTL 55
>gi|220922529|ref|YP_002497831.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947136|gb|ACL57528.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 37.0 bits (84), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASV----TTLGGKLTAV 46
M+ + FL+DE GA +EY +L ++ VA+IA++ T + GK TA+
Sbjct: 1 MNRLSKFLRDEDGAALVEYTVLLGILLVAVIATIGGVGTWVNGKWTAL 48
>gi|156977412|ref|YP_001448318.1| Flp pilus assembly protein [Vibrio harveyi ATCC BAA-1116]
gi|156529006|gb|ABU74091.1| hypothetical protein VIBHAR_06199 [Vibrio harveyi ATCC BAA-1116]
Length = 68
Score = 37.0 bits (84), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Query: 2 KMHIVKN-----FLQDESGATAIEYGLLASLIAVAIIASVTTLG--GKLTAVFADISSKL 54
K+++ N F DE G TAIEYGL+A +AV + +V+ G G L A F +++ +
Sbjct: 4 KLYVQTNLFLSKFKNDERGVTAIEYGLIAVAMAVLVTTAVSPSGFIGSLEAAFEQVATAI 63
Query: 55 N 55
+
Sbjct: 64 S 64
>gi|238027722|ref|YP_002911953.1| putative fimbriae assembly-like protein [Burkholderia glumae
BGR1]
gi|237876916|gb|ACR29249.1| Putative fimbriae assembly related protein [Burkholderia glumae
BGR1]
Length = 56
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFA 48
++ FL++E+G TAIEYGL+A +IA A T L +T F+
Sbjct: 4 LLGRFLEEEAGTTAIEYGLIAGVIAGAAGYMATNLSDDVTQAFS 47
>gi|163801680|ref|ZP_02195578.1| hypothetical protein 1103602000597_AND4_09507 [Vibrio sp. AND4]
gi|159174597|gb|EDP59399.1| hypothetical protein AND4_09507 [Vibrio sp. AND4]
Length = 70
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLG--GKLTAVFADISSKLN 55
F +DE G TAIEYGL+A +AV + ++ T G G+L A F ++ S +
Sbjct: 15 EFNKDERGVTAIEYGLIAVAMAVVLGLALGTDGFIGQLDAAFDEVESTIQ 64
>gi|170724967|ref|YP_001758993.1| Flp/Fap pilin component [Shewanella woodyi ATCC 51908]
gi|169810314|gb|ACA84898.1| Flp/Fap pilin component [Shewanella woodyi ATCC 51908]
Length = 69
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAV---FADISSKL 54
M + + +DE G TAIEYGL+ +AVA+ A+ + G +TA+ F I+ L
Sbjct: 9 MAFLATYKKDERGVTAIEYGLIGVAMAVALTAAFASDGNLMTALNTAFTKITDSL 63
>gi|148252687|ref|YP_001237272.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146404860|gb|ABQ33366.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 56
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
MK ++K F +DESGATAIEYGL+A+ IA+AIIA + LG L +F +++KLN
Sbjct: 1 MKQLLLK-FYEDESGATAIEYGLIAAGIALAIIAILNKLGLTLVGIFTTLTTKLN 54
>gi|294012382|ref|YP_003545842.1| putative pilin Flp [Sphingobium japonicum UT26S]
gi|292675712|dbj|BAI97230.1| putative pilin Flp [Sphingobium japonicum UT26S]
Length = 61
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 5 IVKNF-----LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ KNF + + GATA+EYGL+ +LI +AI+ +++ + K ++ ++++++
Sbjct: 4 LFKNFSFWKLIYCQRGATAVEYGLILALICLAIVGALSNVANKTIGMWNNVATEV 58
>gi|149179075|ref|ZP_01857647.1| hypothetical protein PM8797T_30414 [Planctomyces maris DSM 8797]
gi|148842066|gb|EDL56457.1| hypothetical protein PM8797T_30414 [Planctomyces maris DSM 8797]
Length = 57
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+KNFL E G TA+EY ++ +LI + + ++ +G A F + L
Sbjct: 8 IKNFLVSEDGPTAVEYAVMLALIVIVCLTAIQAVGTNANAKFEAVRDAL 56
>gi|330816678|ref|YP_004360383.1| Putative fimbriae assembly related protein [Burkholderia gladioli
BSR3]
gi|327369071|gb|AEA60427.1| Putative fimbriae assembly related protein [Burkholderia gladioli
BSR3]
Length = 56
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ K FL DE+G TA+EYGL+ + A T L + ++F+ ++S N
Sbjct: 4 VWKRFLADETGVTAVEYGLIGGFVVGAAALGATALSNSVESLFSFVTSFFN 54
>gi|325108086|ref|YP_004269154.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
gi|324968354|gb|ADY59132.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
Length = 57
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
VK+F++ E G TA+EY ++ +LI V + +V +G F + L+
Sbjct: 8 VKHFIECEDGPTAVEYAVMLALIVVVCLTAVRAIGTNANTQFESVRDALS 57
>gi|297618084|ref|YP_003703243.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680]
gi|297145921|gb|ADI02678.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680]
Length = 53
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ +VK L +E G EYGL+ +L+A+A+I + +GG + F ++ L
Sbjct: 2 LSLVKRLLVEEEGQGMAEYGLILALVAIAVITVLGLMGGSIKDKFQEVIDAL 53
>gi|253701798|ref|YP_003022987.1| hypothetical protein GM21_3202 [Geobacter sp. M21]
gi|251776648|gb|ACT19229.1| conserved hypothetical protein [Geobacter sp. M21]
Length = 64
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADIS 51
K L++ +G +EY L+ L+A+ +IA++ ++G + VF ++S
Sbjct: 13 KQILKNTNGQGLVEYALILVLVAIVVIAALKSIGSETNKVFCNVS 57
>gi|91976668|ref|YP_569327.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91683124|gb|ABE39426.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 56
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ F D GAT+IEY ++A I + I++ V LG + A++ ++++ L
Sbjct: 6 LLSRFFADRRGATSIEYAIIAGGICLVIVSVVNGLGVQTGAMYTNVANSL 55
>gi|320103318|ref|YP_004178909.1| hypothetical protein Isop_1777 [Isosphaera pallida ATCC 43644]
gi|319750600|gb|ADV62360.1| hypothetical protein Isop_1777 [Isosphaera pallida ATCC 43644]
Length = 77
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFAD 49
+ E AT+IEY ++ LI +A+I S+ T GG V+ D
Sbjct: 8 RRLHHQEEAATSIEYAVMLLLILLAVIGSIQTFGGSNNGVWGD 50
>gi|2339967|dbj|BAA21831.1| fimbrial protein [Actinobacillus actinomycetemcomitans]
gi|19702502|gb|AAL93271.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+++F ++++G TAIEYGL+A +AV I+A + G + A + SK N
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFI----ASLQSKFNS 63
>gi|326387837|ref|ZP_08209443.1| hypothetical protein Y88_0751 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207883|gb|EGD58694.1| hypothetical protein Y88_0751 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 60
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M +K+ +DE+GATAIEYGL+A+LIAVA I ++ LG L+ F+ +S +
Sbjct: 1 MQFIKSVFRDETGATAIEYGLIAALIAVAAITAMGALGNSLSNTFSLVSGDM 52
>gi|83749641|ref|ZP_00946624.1| Putative Pilin Protein [Ralstonia solanacearum UW551]
gi|207728109|ref|YP_002256503.1| pilin protein [Ralstonia solanacearum MolK2]
gi|207744155|ref|YP_002260547.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|300704927|ref|YP_003746530.1| pilin transmembrane protein [Ralstonia solanacearum CFBP2957]
gi|83723702|gb|EAP70897.1| Putative Pilin Protein [Ralstonia solanacearum UW551]
gi|206591354|emb|CAQ56966.1| pilin protein [Ralstonia solanacearum MolK2]
gi|206595559|emb|CAQ62486.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|299072591|emb|CBJ43941.1| putative pilin transmembrane protein [Ralstonia solanacearum
CFBP2957]
Length = 58
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 34/51 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++K F+++E GA +EY LL + +A+ ++ TT+ + A++ ++++L+
Sbjct: 4 MIKRFVREEDGAAGVEYALLLAFVALVMVTYGTTVKTAVGAIWNSVATQLS 54
>gi|326387727|ref|ZP_08209333.1| hypothetical protein Y88_0641 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207773|gb|EGD58584.1| hypothetical protein Y88_0641 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 61
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKL 43
M ++++ L+D GATA+EYG+L + ++ II T +L
Sbjct: 1 MTMLRHILRDTQGATAVEYGILVGIFSIGIIFGFTEFTNQL 41
>gi|328953763|ref|YP_004371097.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328454087|gb|AEB09916.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 58
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKL 43
++K F+++E GA+A+EY +L I +IA + GKL
Sbjct: 4 MIKKFIREEDGASAVEYAVLVGAIGAVLIAGIYVFYGKL 42
>gi|19702498|gb|AAL93269.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702508|gb|AAL93274.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|307133492|dbj|BAJ19004.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 24/29 (82%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIA 34
+++F ++E+G TAIEYGL+A +AV I+A
Sbjct: 17 IRSFRKNEAGVTAIEYGLIAIAVAVLIVA 45
>gi|94497283|ref|ZP_01303854.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58]
gi|94423146|gb|EAT08176.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58]
Length = 61
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 33/48 (68%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ ++ E GATA+EYGL+ ++I +A++ +++ + + ++ D+ +K+
Sbjct: 11 QGLIKCERGATAVEYGLILAMIVLAMLVALSNVAERTIHMWDDVDNKV 58
>gi|33152391|ref|NP_873744.1| flp operon protein Flp1 [Haemophilus ducreyi 35000HP]
gi|21326702|gb|AAL92462.1| Flp1 [Haemophilus ducreyi]
gi|33148614|gb|AAP96133.1| flp operon protein Flp1 [Haemophilus ducreyi 35000HP]
Length = 85
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGG---KLTAVFADISS 52
++ F +++ G TAIEYGL+A +A+ IIA G KL F+D+++
Sbjct: 21 IQRFRKNQQGVTAIEYGLIAVAVAILIIAVFYNNQGFLMKLKTKFSDLAT 70
>gi|332798620|ref|YP_004460119.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1]
gi|332696355|gb|AEE90812.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1]
Length = 60
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 6 VKNFLQ----DESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++NFL +ESG +EYGL+ +L+AV +I ++ + L ++F +++ L +
Sbjct: 1 MRNFLNWFTSEESGQGMVEYGLIIALVAVILIVALQGMTDGLESIFGEVTDALEESA 57
>gi|27376553|ref|NP_768082.1| pilus assembly protein pilin subunit [Bradyrhizobium japonicum
USDA 110]
gi|27349694|dbj|BAC46707.1| pilus assembly protein pilin subunit [Bradyrhizobium japonicum
USDA 110]
Length = 54
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++ F +DESGATAIEYGL+A+ IA+AII V LG L F IS+ L
Sbjct: 3 NLIARFAKDESGATAIEYGLIAAGIALAIITVVNNLGSTLNTKFTSISTSL 53
>gi|254502513|ref|ZP_05114664.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11]
gi|222438584|gb|EEE45263.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11]
Length = 72
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 2 KMHIVKNF---LQDESGATAIEYGLLASLIAVAIIASVTTLG 40
K +V F + D SGAT +EYGLL + +++AI+ +V ++G
Sbjct: 6 KQFLVNQFTRLIHDRSGATMVEYGLLVATLSIAILLTVGSIG 47
>gi|332185257|ref|ZP_08387006.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332014981|gb|EGI57037.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 57
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M+ ++ +++ GATAIEYGL+A+L+AVA IA ++ LGG L F I KL+
Sbjct: 1 MNTLRKMVKNNKGATAIEYGLIAALVAVAAIAGMSKLGGSLGTAFNTIGGKLD 53
>gi|115523899|ref|YP_780810.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
gi|115517846|gb|ABJ05830.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
Length = 54
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 32/52 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F+ DE+ AT++EY L+A+ I++ I+ +V +G +T + I + +
Sbjct: 3 RLLSRFVADETAATSLEYALIAAGISITIVGAVQVIGTSVTERYTAIGTAIK 54
>gi|328953764|ref|YP_004371098.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328454088|gb|AEB09917.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 60
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++K F+++E GA+A+EY +L I +IA + G+L ++K+
Sbjct: 4 LIKKFIREEDGASAVEYAVLVGAIGAVLIAGIYAFYGRLNTAIDSAATKIG 54
>gi|114704315|ref|ZP_01437223.1| hypothetical protein FP2506_05261 [Fulvimarina pelagi HTCC2506]
gi|114539100|gb|EAU42220.1| hypothetical protein FP2506_05261 [Fulvimarina pelagi HTCC2506]
Length = 66
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTL 39
L D+SGATAIEY L+A +IA AI+ + L
Sbjct: 18 LNDDSGATAIEYCLIAGIIATAIVTGLEAL 47
>gi|15487347|dbj|BAB64545.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702504|gb|AAL93272.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702506|gb|AAL93273.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702524|gb|AAL93282.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702526|gb|AAL93283.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702538|gb|AAL93289.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702540|gb|AAL93290.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702542|gb|AAL93291.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702544|gb|AAL93292.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|41352067|gb|AAS00700.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352073|gb|AAS00704.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352076|gb|AAS00706.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352079|gb|AAS00708.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 76
Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+++F ++++G TAIEYGL+A +AV I+A + G + A++ +K N
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFI----ANLQNKFNS 63
>gi|316934953|ref|YP_004109935.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
gi|315602667|gb|ADU45202.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
Length = 54
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ F D GAT+IEY L+A I++ I+ TLG L A ++ + L
Sbjct: 3 RLISRFRTDTRGATSIEYALIAVGISIVIVGLSATLGTNLAAKYSAVKDAL 53
>gi|91788406|ref|YP_549358.1| Flp/Fap pilin component [Polaromonas sp. JS666]
gi|91697631|gb|ABE44460.1| Flp/Fap pilin component [Polaromonas sp. JS666]
Length = 67
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M+ ++ F++ E G TAIEYGL+A+LIA+ IIA+VT +G +L VF +++ L
Sbjct: 9 MNFIQKFMRKEDGVTAIEYGLIAALIAIVIIAAVTIVGTQLCIVFNSVATAL 60
>gi|149188849|ref|ZP_01867139.1| hypothetical protein VSAK1_05850 [Vibrio shilonii AK1]
gi|148837269|gb|EDL54216.1| hypothetical protein VSAK1_05850 [Vibrio shilonii AK1]
Length = 74
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 11 QDESGATAIEYGLLASLIAVAIIASVTTLG-----GKLTAVFADISSKLNPKS 58
DE G TAIEYGL+A +AV ++++V G G+L FA IS +N +
Sbjct: 18 NDERGVTAIEYGLIAVAMAV-LLSAVLVFGEGNMLGELQQAFAAISGDINTTT 69
>gi|197123321|ref|YP_002135272.1| Flp/Fap pilin component [Anaeromyxobacter sp. K]
gi|196173170|gb|ACG74143.1| Flp/Fap pilin component [Anaeromyxobacter sp. K]
Length = 59
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ +K +DE TA+EY ++ ++I + II LG + F + +S++
Sbjct: 2 LQTLKRLWKDEEAPTAVEYAIMVAVIGLVIIIGAAALGTNVNTTFGNAASRV 53
>gi|326386385|ref|ZP_08208008.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326209046|gb|EGD59840.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 60
Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M ++ L+DE+GATAIEYGL+A+LIAVA I ++ LG L+ F+ +S +
Sbjct: 1 MKLINRILKDEAGATAIEYGLIAALIAVAAITAMGALGNSLSNTFSLVSGDM 52
>gi|319951067|ref|ZP_08024920.1| hypothetical protein ES5_15571 [Dietzia cinnamea P4]
gi|319435227|gb|EFV90494.1| hypothetical protein ES5_15571 [Dietzia cinnamea P4]
Length = 81
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 11 QDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ + GATA+EYGL+ LIAVAIIA+V G +L +F S++LN ++
Sbjct: 26 RKDRGATAVEYGLMVGLIAVAIIAAVIAFGDQLRGIFQGTSTQLNTET 73
>gi|254438531|ref|ZP_05052025.1| hypothetical protein OA307_3401 [Octadecabacter antarcticus 307]
gi|198253977|gb|EDY78291.1| hypothetical protein OA307_3401 [Octadecabacter antarcticus 307]
Length = 61
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ +KNF DE GA +++ +L + I IA +T++GG A+ ISS L
Sbjct: 2 LNFIKNFRNDEDGAVTVDWVVLTAAIVGLGIAVLTSVGGGTAALSDKISSNL 53
>gi|307942654|ref|ZP_07658002.1| conserved domain protein [Roseibium sp. TrichSKD4]
gi|307774293|gb|EFO33506.1| conserved domain protein [Roseibium sp. TrichSKD4]
Length = 54
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADI 50
M + +K D+ G E+G L +LI V IA++ T+G L AVF +
Sbjct: 1 MVLRTLKALAHDKRGTAETEFGFLFALIVVGTIATLATMGVDLAAVFGAV 50
>gi|332185116|ref|ZP_08386865.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332014840|gb|EGI56896.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 57
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ + + GATAIEYGL+A+LIAVA IA +++LGG L F I KL+
Sbjct: 4 IRKIIHNRKGATAIEYGLIAALIAVAAIAGMSSLGGSLGTAFNTIGGKLD 53
>gi|218887832|ref|YP_002437153.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758786|gb|ACL09685.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
I+ + DE GATA+EYGL+A+LIA I+A+VT LG K++A F+ I SK+
Sbjct: 4 IIARLINDEEGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKM 53
>gi|220918099|ref|YP_002493403.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955953|gb|ACL66337.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
Length = 66
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++ +D+ GATA+EYGL+ + IA I+ V +LGG++ F + + +
Sbjct: 9 MLRKLWKDDEGATAVEYGLMVAAIAAVIVVVVFSLGGRVNTAFQTVDTTI 58
>gi|51891533|ref|YP_074224.1| pilus subunit protein [Symbiobacterium thermophilum IAM 14863]
gi|51855222|dbj|BAD39380.1| pilus subunit protein [Symbiobacterium thermophilum IAM 14863]
Length = 63
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 4 HIVKNFLQ---DESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
I K F + + G EYGL+ +LIAV +I ++T L L F ++++LN
Sbjct: 3 RIAKGFRRLVVRQEGQGMTEYGLIIALIAVVLITTLTGLNKTLDKTFNKVTTQLN 57
>gi|296121140|ref|YP_003628918.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
gi|296013480|gb|ADG66719.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
Length = 57
Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M V FL+ E G TA+EY ++ ++I + +I V+ G + I S L
Sbjct: 1 MESVIRFLRSEDGPTAVEYAVMLAMILLVVITGVSAFGNAQANYWGGIQSDLE 53
>gi|299067804|emb|CBJ39015.1| putative pilin transmembrane protein [Ralstonia solanacearum
CMR15]
Length = 53
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 31/50 (62%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++ F+++E GA + EY LL + +A+ +IA L G + + ++ I++
Sbjct: 4 VIQRFIREEDGAASTEYALLVTFVALVMIAYGDALQGTVKSAWSQIAAAF 53
>gi|19702534|gb|AAL93287.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
Length = 76
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 24/29 (82%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIA 34
+++F ++++G TAIEYGL+A +AV I+A
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVA 45
>gi|71736106|ref|YP_276548.1| pilin protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|257483349|ref|ZP_05637390.1| pilin protein, putative [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289625314|ref|ZP_06458268.1| pilin protein, putative [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289647839|ref|ZP_06479182.1| pilin protein, putative [Pseudomonas syringae pv. aesculi str.
2250]
gi|298488961|ref|ZP_07006984.1| Flp pilus assembly protein, pilin Flp [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|71556659|gb|AAZ35870.1| pilin protein, putative [Pseudomonas syringae pv. phaseolicola
1448A]
gi|298156459|gb|EFH97556.1| Flp pilus assembly protein, pilin Flp [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320322728|gb|EFW78821.1| pilin protein, putative [Pseudomonas syringae pv. glycinea str.
B076]
gi|320330487|gb|EFW86466.1| pilin protein, putative [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330867148|gb|EGH01857.1| pilin protein [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330871036|gb|EGH05745.1| pilin protein [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330873795|gb|EGH07944.1| pilin protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330892474|gb|EGH25135.1| pilin protein [Pseudomonas syringae pv. mori str. 301020]
gi|331012568|gb|EGH92624.1| pilin protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 62
Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
VK+F++D A+ IEY L+A+++AVAI+A V T+ G++TA+F I + L
Sbjct: 14 VKSFIKDREAASGIEYALIAAMVAVAIVAFVPTISGRITAMFTTIQNAL 62
>gi|330987577|gb|EGH85680.1| pilin protein [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 68
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
VK+F++D A+ IEY L+A+++AVAI+A V T+ G++TA+F I + L
Sbjct: 20 VKSFIKDREAASGIEYALIAAMVAVAIVAFVPTISGRITAMFTTIQNAL 68
>gi|319781140|ref|YP_004140616.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167028|gb|ADV10566.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 58
Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
I F DESGATAIEYGL+A+LIA+AII +G L +F + + +N
Sbjct: 4 IACRFAWDESGATAIEYGLIAALIALAIITGAGAVGNSLNGIFTTVGTTVN 54
>gi|120602163|ref|YP_966563.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|120562392|gb|ABM28136.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|311234259|gb|ADP87113.1| Flp/Fap pilin component [Desulfovibrio vulgaris RCH1]
Length = 58
Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 40/50 (80%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
I++ ++E+GATA+EYGL+A+LIA I+A+VT LG K++A F+ I SK+
Sbjct: 4 IMQRLFKEETGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKM 53
>gi|292491515|ref|YP_003526954.1| hypothetical protein Nhal_1416 [Nitrosococcus halophilus Nc4]
gi|291580110|gb|ADE14567.1| hypothetical protein Nhal_1416 [Nitrosococcus halophilus Nc4]
Length = 62
Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++FL+DE G T EY + LI V A LGG++ V ++++L
Sbjct: 8 IRSFLRDEEGLTMTEYAVAGGLIVVGGAAVFMALGGEIERVIGLVNAEL 56
>gi|90412179|ref|ZP_01220185.1| hypothetical protein P3TCK_27819 [Photobacterium profundum 3TCK]
gi|90326903|gb|EAS43288.1| hypothetical protein P3TCK_27819 [Photobacterium profundum 3TCK]
Length = 68
Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGG---KLTAVFADISSKL 54
M + + DE G TAIEYGL+A +AV + A +T G LT FA I+++L
Sbjct: 9 MAFLYTYKNDERGVTAIEYGLIAVAMAVLLGAVFSTQGSLIQALTKGFALITAEL 63
>gi|221067363|ref|ZP_03543468.1| hypothetical protein CtesDRAFT_PD2700 [Comamonas testosteroni
KF-1]
gi|220712386|gb|EED67754.1| hypothetical protein CtesDRAFT_PD2700 [Comamonas testosteroni
KF-1]
Length = 65
Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+K+ L+D+ GA +EY L+ +++++A++ ++ +L G FAD +++
Sbjct: 11 LKHLLRDDEGAQVVEYALIIAVVSIALVLAIQSLAG---GQFADFITRVT 57
>gi|317403502|gb|EFV84005.1| hypothetical protein HMPREF0005_03133 [Achromobacter xylosoxidans
C54]
Length = 58
Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
MK + + F +E G TA+EYGL+A IAVA++A++ T G L +F + +KL S
Sbjct: 1 MKAKLAQ-FWNEEEGITALEYGLIAGTIAVALVAALATFTGALGDLFTSLQAKLAAAS 57
>gi|296283732|ref|ZP_06861730.1| hypothetical protein CbatJ_08924 [Citromicrobium bathyomarinum
JL354]
Length = 62
Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 23/29 (79%)
Query: 11 QDESGATAIEYGLLASLIAVAIIASVTTL 39
+DE GATA+EYGL+ +L+ +A++ ++ T
Sbjct: 10 RDERGATAVEYGLILALVFLAMVGAIGTF 38
>gi|212635457|ref|YP_002311982.1| hypothetical protein swp_2661 [Shewanella piezotolerans WP3]
gi|212556941|gb|ACJ29395.1| hypothetical protein swp_2661 [Shewanella piezotolerans WP3]
Length = 64
Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++ F++DESG TA+EY + L+ +I + LG T+ ++S +N S
Sbjct: 6 LLTEFIEDESGLTAVEYAIAGGLVVGGMIGAFNLLGDNATSKINCLASAVNGAS 59
>gi|116626782|ref|YP_828938.1| Flp/Fap pilin component [Candidatus Solibacter usitatus
Ellin6076]
gi|116229944|gb|ABJ88653.1| Flp/Fap pilin component [Candidatus Solibacter usitatus
Ellin6076]
Length = 60
Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 31/52 (59%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+V NF++DE G +EY L+ + + +A+I +V L + +++ ++ L+
Sbjct: 4 LVLNFVRDEQGQDLVEYALIVAAVGLALITTVNQLSQGIVSLYQSMTGDLSS 55
>gi|254473839|ref|ZP_05087234.1| hypothetical protein PJE062_4520 [Pseudovibrio sp. JE062]
gi|211957225|gb|EEA92430.1| hypothetical protein PJE062_4520 [Pseudovibrio sp. JE062]
Length = 71
Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVT 37
+ I++ Q E G+ IE+GL++ LIA+AI+A V+
Sbjct: 2 LSILRGLFQRELGSATIEFGLISGLIALAILAMVS 36
>gi|85708396|ref|ZP_01039462.1| hypothetical protein NAP1_04135 [Erythrobacter sp. NAP1]
gi|85689930|gb|EAQ29933.1| hypothetical protein NAP1_04135 [Erythrobacter sp. NAP1]
Length = 54
Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M +DE GATAIEYGL+A+LIAVA +A++ TLG L F+ + S +
Sbjct: 1 MKFFNKLARDEQGATAIEYGLIAALIAVAAVAAMGTLGNTLADTFSQVESDM 52
>gi|17545377|ref|NP_518779.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427669|emb|CAD14188.1| putative pilin transmembrane protein [Ralstonia solanacearum
GMI1000]
Length = 53
Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 31/48 (64%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
+V+ F+++E GA + EY LL + +A+ ++A L G + + ++ I++
Sbjct: 4 VVQRFIRNEDGAASTEYALLVTFVALVMLAYGDALQGTVKSAWSQIAA 51
>gi|296444357|ref|ZP_06886322.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258004|gb|EFH05066.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 55
Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 26/40 (65%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVF 47
FL DE GAT+IEY + + +++ I ++ +G KL++ +
Sbjct: 7 RFLADEIGATSIEYATIGAFVSILIYSATKVIGTKLSSAY 46
>gi|307294422|ref|ZP_07574266.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
gi|306880573|gb|EFN11790.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
Length = 59
Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLT 44
M +KN DE GA+A EY L+ +++ I + LGG ++
Sbjct: 1 MTFIKNLWADECGASAAEYALILAIVGTGIALAAFQLGGAIS 42
>gi|269105130|ref|ZP_06157824.1| fimbrial protein precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|312621077|ref|YP_003993805.1| flp pilus assembly protein, pilin flp [Photobacterium damselae
subsp. damselae]
gi|268160580|gb|EEZ39079.1| fimbrial protein precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|311872798|emb|CBX86889.1| Flp pilus assembly protein, pilin Flp [Photobacterium damselae
subsp. damselae]
Length = 69
Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Query: 6 VKNFLQDESGATAIEY---GLLASLIAVAIIAS-----VTTLGGKLTAVFADISSKLNPK 57
++NF +DE G TAIEY G+ S I +A+ A T L G +T + +I+S N K
Sbjct: 9 LQNFFKDERGVTAIEYAIIGVAVSAIVLAVFAGDANSLKTALSGAVTTITDNITSANNIK 68
>gi|322434112|ref|YP_004216324.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
gi|321161839|gb|ADW67544.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ + L+DESG IEY L+A+LI + + ++ K+ F + S L
Sbjct: 6 DLLSDLLEDESGQDLIEYALVAALIGLGAVVAMNGFSTKVKTAFNSVGSSL 56
>gi|311743546|ref|ZP_07717352.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
gi|311312676|gb|EFQ82587.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
Length = 67
Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 11 QDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
+ + GA+A EY L+ S+I +IA LGG + FAD+++
Sbjct: 22 RGDEGASATEYALMVSMITFTVIAINALLGGIVAGFFADLTA 63
>gi|41352064|gb|AAS00698.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 24/29 (82%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIA 34
+++F ++++G TAIEYGL+A +AV I+A
Sbjct: 17 IRSFKKNQAGVTAIEYGLIAIAVAVLIVA 45
>gi|86748910|ref|YP_485406.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
gi|86571938|gb|ABD06495.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
Length = 54
Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
I F++DESGATAIEYGL+A+ IA+AIIA + +G KL F I++ L
Sbjct: 4 IFARFVKDESGATAIEYGLIAAGIALAIIAVINGMGTKLNTAFTSINTAL 53
>gi|330811041|ref|YP_004355503.1| hypothetical protein PSEBR_a4095 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327379149|gb|AEA70499.1| Hypothetical protein PSEBR_a4095 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 63
Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGG----KLTAVFA 48
++ IVK F+ DE G T +EY + LI VA+ A LGG ++TA+ A
Sbjct: 6 LRTSIVK-FIDDEDGLTIVEYAVAGGLITVAVAAMFVLLGGAVNDRITALCA 56
>gi|86159253|ref|YP_466038.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775764|gb|ABC82601.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C]
Length = 59
Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/52 (25%), Positives = 28/52 (53%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ +K +DE TA+EY ++ ++I + II LG + F + ++++
Sbjct: 2 LQTLKRLWKDEEAPTAVEYAIMVAVIGLVIIVGAQILGTNVNTTFNNAANRV 53
>gi|307245416|ref|ZP_07527504.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306853757|gb|EFM85974.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
Length = 77
Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIA 34
++ F +++ G TAIEYGL+A +A+ I+A
Sbjct: 17 IRRFKENQQGVTAIEYGLIAVAVAILIVA 45
>gi|239814529|ref|YP_002943439.1| Flp/Fap pilin component [Variovorax paradoxus S110]
gi|239801106|gb|ACS18173.1| Flp/Fap pilin component [Variovorax paradoxus S110]
Length = 58
Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTL--GGKLTAVFADISSKLNPKS 58
FL+DESGA IEY L+ +++++A++ ++ L G T +++ L +
Sbjct: 5 FLKDESGAQVIEYALIIAVVSIALVVALRGLTDNGSFTTFLTHVTNCLTTTT 56
>gi|307261009|ref|ZP_07542691.1| hypothetical protein appser12_5760 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306869311|gb|EFN01106.1| hypothetical protein appser12_5760 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 78
Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIA 34
++ F +++ G TAIEYGL+A +A+ I+A
Sbjct: 17 IRRFKENQQGVTAIEYGLIAVAVAILIVA 45
>gi|153006809|ref|YP_001381134.1| Flp/Fap pilin component [Anaeromyxobacter sp. Fw109-5]
gi|152030382|gb|ABS28150.1| Flp/Fap pilin component [Anaeromyxobacter sp. Fw109-5]
Length = 58
Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++ +DE G TA+EYG++ +LIAV IIA+V LG L+ F D+++++ P
Sbjct: 3 QMLMKLWKDEEGPTAVEYGVMVALIAVVIIAAVILLGQNLSTTFNDVATQILP 55
>gi|283852166|ref|ZP_06369439.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
gi|283572392|gb|EFC20379.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
Length = 58
Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVF 47
FL DESGAT+ EY +LASL+A +A VT G + A+F
Sbjct: 7 RFLNDESGATSSEYAILASLVAGVAVAVVTGFGLSVRALF 46
>gi|82703480|ref|YP_413046.1| Flp/Fap pilin component [Nitrosospira multiformis ATCC 25196]
gi|82411545|gb|ABB75654.1| Flp/Fap pilin component [Nitrosospira multiformis ATCC 25196]
Length = 60
Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+K FL DE G TAIEY L+A+LIAVAII +V +G L VF IS+ L
Sbjct: 8 MKQFLNDEEGVTAIEYALIAALIAVAIITAVRQVGTDLNLVFGAISTAL 56
>gi|190149869|ref|YP_001968394.1| flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|307263193|ref|ZP_07544814.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|189915000|gb|ACE61252.1| flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|306871555|gb|EFN03278.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 78
Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIA 34
++ F +++ G TAIEYGL+A +A+ I+A
Sbjct: 17 IRRFKENQQGVTAIEYGLIAVAVAILIVA 45
>gi|218887833|ref|YP_002437154.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758787|gb|ACL09686.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ +DE GATA+EYGL+A+LIA I+A+VT LG K++A F+ I SK+
Sbjct: 5 ITTLFRDEEGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKM 53
>gi|239814530|ref|YP_002943440.1| hypothetical protein Vapar_1523 [Variovorax paradoxus S110]
gi|239801107|gb|ACS18174.1| hypothetical protein Vapar_1523 [Variovorax paradoxus S110]
Length = 58
Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTL 39
K+FL DESGA +EY L+ ++I++ +I S+ L
Sbjct: 3 KSFLADESGAQMVEYALVIAVISILLITSLRPL 35
>gi|218887831|ref|YP_002437152.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758785|gb|ACL09684.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
I+ + DE GATA+EYGL+A+LIA I+A+VT LG K+++ F+ I SK+
Sbjct: 4 IIARLINDEEGATALEYGLIAALIAAVIVAAVTALGTKVSSTFSYIDSKM 53
>gi|326797324|ref|YP_004315144.1| Flp/Fap pilin component [Marinomonas mediterranea MMB-1]
gi|326548088|gb|ADZ93308.1| Flp/Fap pilin component [Marinomonas mediterranea MMB-1]
Length = 65
Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAV---AIIAS----VTTLGGKLTAVFADISSKLNP 56
+K FL DE G TAIEYG+LA+ +A I S VT L + +++ I++ NP
Sbjct: 5 IKRFLSDERGVTAIEYGILAAAMAAAIGVIFGSDGVFVTALKDRFSSIADQITNTNNP 62
>gi|149185491|ref|ZP_01863807.1| hypothetical protein ED21_20739 [Erythrobacter sp. SD-21]
gi|148830711|gb|EDL49146.1| hypothetical protein ED21_20739 [Erythrobacter sp. SD-21]
Length = 63
Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSK 53
++ NFL+DESGA+A EY L+ +++ + +V T+ + V SS+
Sbjct: 1 MLTNFLRDESGASAAEYALILAIVGAGLAFAVFTVSDAIERVIYPASSQ 49
>gi|157375512|ref|YP_001474112.1| hypothetical protein Ssed_2375 [Shewanella sediminis HAW-EB3]
gi|157317886|gb|ABV36984.1| hypothetical protein Ssed_2375 [Shewanella sediminis HAW-EB3]
Length = 66
Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG 40
I F++DESG TA+EY + L+ +IA+ LG
Sbjct: 5 QIFIEFIEDESGLTAVEYAIAGGLVVGGMIAAFNELG 41
>gi|319941905|ref|ZP_08016226.1| hypothetical protein HMPREF9464_01445 [Sutterella wadsworthensis
3_1_45B]
gi|319804558|gb|EFW01428.1| hypothetical protein HMPREF9464_01445 [Sutterella wadsworthensis
3_1_45B]
Length = 64
Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAV 46
++ F++ G TAIEYG+LA+ +A+ I A V++ G TA+
Sbjct: 7 IRLFIRSRRGVTAIEYGILAAGVAIVIGALVSSDGPLATAI 47
>gi|154244240|ref|YP_001415198.1| Flp/Fap pilin component [Xanthobacter autotrophicus Py2]
gi|154158325|gb|ABS65541.1| Flp/Fap pilin component [Xanthobacter autotrophicus Py2]
Length = 54
Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 35/52 (67%), Gaps = 5/52 (9%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
MK+ + F+++E G+TA+EYGL+A+ +++AI+ + ++ A FA + +
Sbjct: 1 MKL-LFWRFIREEEGSTALEYGLIAAGLSIAIVTVLV----QIAATFARLQA 47
>gi|152994344|ref|YP_001339179.1| Flp/Fap pilin component [Marinomonas sp. MWYL1]
gi|150835268|gb|ABR69244.1| Flp/Fap pilin component [Marinomonas sp. MWYL1]
Length = 65
Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVA---IIAS----VTTLGGKLTAVFADISSKLNP 56
V+ FL DE G TAIEYG+LA+ +A A I S VT L + +++ I++ NP
Sbjct: 5 VRRFLSDERGVTAIEYGILAAAMAAAIGVIFGSDGVFVTALKERFSSIADQITNTSNP 62
>gi|37680197|ref|NP_934806.1| hypothetical protein VV2013 [Vibrio vulnificus YJ016]
gi|326423985|ref|YP_004300167.1| hypothetical protein VV1_3224 [Vibrio vulnificus CMCP6]
gi|37198944|dbj|BAC94777.1| hypothetical protein [Vibrio vulnificus YJ016]
gi|319999364|gb|ADV91938.1| hypothetical protein VV1_3224 [Vibrio vulnificus CMCP6]
Length = 77
Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 5 IVKNFLQDESGATAIEYGL---LASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++K F+ DESGATAIEYG+ + +AI S L F I + LNP
Sbjct: 20 MLKQFINDESGATAIEYGILAAGLAAGVLAIFGSDGVFISALKEKFLGIVNSLNP 74
>gi|325275760|ref|ZP_08141636.1| Flp/Fap pilin component [Pseudomonas sp. TJI-51]
gi|324099101|gb|EGB97071.1| Flp/Fap pilin component [Pseudomonas sp. TJI-51]
Length = 53
Score = 33.5 bits (75), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
NFL + GA+ IEY ++A+++AV + A V + + F I + L
Sbjct: 7 NFLHRKDGASGIEYAVIATMVAVVLAAFVGDISTAVNTTFTTIKNAL 53
>gi|107028253|ref|YP_625348.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116686246|ref|YP_839493.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170734873|ref|YP_001773987.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105897417|gb|ABF80375.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116651961|gb|ABK12600.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169820911|gb|ACA95492.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 63
Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
V F++DE G TAIEYGL+A+LIA+ IIA+++T+G L VF I+ L+
Sbjct: 8 VGRFVRDEDGVTAIEYGLIAALIAIGIIAALSTVGKDLKTVFTTIADDLD 57
Searching..................................................done
Results from round 2
>gi|254780730|ref|YP_003065143.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040407|gb|ACT57203.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 120
Score = 74.9 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 47/56 (83%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
MKM+I+K L++ SGATAIEYGLLASL++VAII++V+TLG ++ V+ IS++L+
Sbjct: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
>gi|254780732|ref|YP_003065145.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040409|gb|ACT57205.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 58
Score = 72.6 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 58/58 (100%), Positives = 58/58 (100%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS
Sbjct: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
>gi|254255251|ref|ZP_04948567.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158]
gi|124900988|gb|EAY71738.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158]
Length = 112
Score = 71.1 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
V+ F++DE G TAIEYGL+A+LIAV II +++T+G L VF+ I++ L+
Sbjct: 57 VRRFVRDEEGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDSA 108
>gi|254255250|ref|ZP_04948566.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158]
gi|124900987|gb|EAY71737.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158]
Length = 241
Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
V +++E G TAIEYGL+A+LIA+ I+A++TT+G L VF+ ++ L+
Sbjct: 186 VAWLVRNEDGVTAIEYGLIAALIAIGIVAALTTIGTDLKTVFSTLAVDLDS 236
>gi|218506996|ref|ZP_03504874.1| pilus subunit protein [Rhizobium etli Brasil 5]
Length = 92
Score = 68.4 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 40/55 (72%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ FL+DESGATAIEYGL+A+LI+VA+I T+LG K+ F +S+K++ +
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLSTKMDGAT 57
>gi|161524909|ref|YP_001579921.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616]
gi|189350341|ref|YP_001945969.1| putative fimbriae assembly-related protein [Burkholderia
multivorans ATCC 17616]
gi|160342338|gb|ABX15424.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616]
gi|189334363|dbj|BAG43433.1| putative fimbriae assembly-related protein [Burkholderia
multivorans ATCC 17616]
Length = 69
Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 43/54 (79%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I+K FL++E G TAIEYGL+A LIAVAIIASV+T+G KL +F +ISS ++ S
Sbjct: 4 IIKCFLKEEDGVTAIEYGLIAGLIAVAIIASVSTIGSKLGTMFENISSCVSSPS 57
>gi|315121897|ref|YP_004062386.1| hypothetical protein CKC_00735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495299|gb|ADR51898.1| hypothetical protein CKC_00735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 64
Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/56 (64%), Positives = 46/56 (82%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
MK++I++NFLQDESGATAIEYGLLA+L++V II +VTTLG KL+A FA + P
Sbjct: 1 MKINIIRNFLQDESGATAIEYGLLAALVSVVIIGAVTTLGTKLSATFAKVGESFLP 56
>gi|160897519|ref|YP_001563101.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
gi|160363103|gb|ABX34716.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
Length = 68
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 36/51 (70%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
I+KNF +DE GATAIEYGL+A LIAV I+ T LG L +F I++KL
Sbjct: 14 IIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTNLNGLFTRIATKLT 64
>gi|86355861|ref|YP_467753.1| component of type IV pilus, pilin subunit protein [Rhizobium etli
CFN 42]
gi|86279963|gb|ABC89026.1| component of type IV pilus, pilin subunit protein [Rhizobium etli
CFN 42]
Length = 91
Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 41/52 (78%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ FL+DESGATAIEYGL+A+LI+VA+IA T+LGGK+ F ++S +++
Sbjct: 26 KLFSRFLKDESGATAIEYGLIAALISVALIAGATSLGGKIGDTFNNLSDRMD 77
>gi|288956966|ref|YP_003447307.1| Flp/Fap pilin component [Azospirillum sp. B510]
gi|288909274|dbj|BAI70763.1| Flp/Fap pilin component [Azospirillum sp. B510]
Length = 75
Score = 65.3 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 42/54 (77%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I++ +D+ GATAIEYGLLA+LIAVAII V+ +GG L ++F ISSK++ K+
Sbjct: 20 ILRRLRKDDRGATAIEYGLLAALIAVAIIGGVSAVGGNLNSMFNAISSKISAKT 73
>gi|254780733|ref|YP_003065146.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040410|gb|ACT57206.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 56
Score = 64.9 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/56 (78%), Positives = 49/56 (87%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
MKM+IVK+FL+DESGATAIEYGLLASLIAVAIIASVTTLGGKL+ VF DI +
Sbjct: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
>gi|218665735|ref|YP_002427087.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218517948|gb|ACK78534.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 79
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
H V F+++E G TAIEYGL+A LIAVAII SV LG KL ++F+ I+ +L
Sbjct: 26 HAVARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQLKVP 79
>gi|33593020|ref|NP_880664.1| hypothetical protein BP1991 [Bordetella pertussis Tohama I]
gi|33563395|emb|CAE42271.1| putative membrane protein [Bordetella pertussis Tohama I]
gi|332382432|gb|AEE67279.1| hypothetical protein BPTD_1961 [Bordetella pertussis CS]
Length = 58
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+KNF +DE GATAIEYGL+ LIAV II SV+ LG L F I ++L+ ++
Sbjct: 5 LKNFWRDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELSAEA 57
>gi|134295591|ref|YP_001119326.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134138748|gb|ABO54491.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 91
Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++K FL++E+G TAIEYGL+A L+AVAIIA V++LGG L +F I S ++
Sbjct: 24 LIKRFLKEETGVTAIEYGLIAGLVAVAIIAGVSSLGGNLNTMFTSIGSCVSS 75
>gi|221213143|ref|ZP_03586119.1| Flp/Fap pilin component [Burkholderia multivorans CGD1]
gi|221167356|gb|EED99826.1| Flp/Fap pilin component [Burkholderia multivorans CGD1]
Length = 73
Score = 63.4 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 41/54 (75%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I+K FL++E+G TAIEYGL+A LIAVAI+A V+++GG L +F ++ S + S
Sbjct: 4 IIKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFKNLGSCITDPS 57
>gi|221197777|ref|ZP_03570823.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M]
gi|221204665|ref|ZP_03577682.1| Flp/Fap pilin component [Burkholderia multivorans CGD2]
gi|221175522|gb|EEE07952.1| Flp/Fap pilin component [Burkholderia multivorans CGD2]
gi|221181709|gb|EEE14110.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M]
Length = 72
Score = 63.4 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 40/54 (74%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I+K FL++E+G TAIEYGL+A LIAVAI+A V+++GG L +F ++ + S
Sbjct: 4 IIKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFNNLGKCITDPS 57
>gi|167584952|ref|ZP_02377340.1| hypothetical protein BuboB_06426 [Burkholderia ubonensis Bu]
Length = 70
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/47 (57%), Positives = 35/47 (74%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
NFL+D+SG TAIEYGL+A+LIAV II +V +G L VF I ++L
Sbjct: 24 NFLRDDSGVTAIEYGLIAALIAVVIIGAVQIVGQDLNGVFTTIGNEL 70
>gi|85859143|ref|YP_461345.1| flp/Fap pilin component [Syntrophus aciditrophicus SB]
gi|85722234|gb|ABC77177.1| flp/fap pilin component [Syntrophus aciditrophicus SB]
Length = 56
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 38/54 (70%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
M ++K FL+DE G TAIEYGL+A+LIAV II +VT +G L F +++ +L
Sbjct: 1 MELIKRFLKDEEGVTAIEYGLIAALIAVVIIGAVTLVGKGLDGTFREVAGELGE 54
>gi|163757622|ref|ZP_02164711.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
gi|162285124|gb|EDQ35406.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
Length = 63
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
I F++DESGATAIEYGL+A+LI+VA+I TTLG L F+ +++KL+
Sbjct: 9 IFDRFVKDESGATAIEYGLIAALISVALITGATTLGNSLNNQFSGLATKLD 59
>gi|33596964|ref|NP_884607.1| hypothetical protein BPP2371 [Bordetella parapertussis 12822]
gi|33600806|ref|NP_888366.1| hypothetical protein BB1821 [Bordetella bronchiseptica RB50]
gi|33566415|emb|CAE37668.1| putative membrane protein [Bordetella parapertussis]
gi|33568406|emb|CAE32318.1| putative membrane protein [Bordetella bronchiseptica RB50]
Length = 58
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 36/53 (67%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+KNF DE GATAIEYGL+ LIAV II SV+ LG L F I ++L+ ++
Sbjct: 5 LKNFWHDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELSAEA 57
>gi|160897518|ref|YP_001563100.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
gi|160363102|gb|ABX34715.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
Length = 58
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++KNF +DE GATAIEYGL+A LIAV I+ T LG L +F +++KLN
Sbjct: 3 EMIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTDLNGLFNRLATKLN 54
>gi|167584951|ref|ZP_02377339.1| hypothetical protein BuboB_06421 [Burkholderia ubonensis Bu]
Length = 56
Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ +K F++DE G TAIEYGL+A+LIAV II +V +G L VF I ++L
Sbjct: 5 VQQLKQFVRDEDGVTAIEYGLIAALIAVVIIGAVRIVGQDLNGVFTTIGNEL 56
>gi|94309598|ref|YP_582808.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353450|gb|ABF07539.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+K F++DE G TAIEYGL+A+LIAV IIASV +G L+ VF+ I+ +L
Sbjct: 8 LKRFVRDEDGVTAIEYGLIAALIAVVIIASVQLVGQNLSKVFSLIAGELG 57
>gi|325525573|gb|EGD03363.1| Flp/Fap pilin component [Burkholderia sp. TJI49]
Length = 60
Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M V+ F++DE G TAIEYGL+A+LIAV IIA+++T+G L VF+ I+ LN
Sbjct: 5 MLDVRRFVRDEDGVTAIEYGLIAALIAVGIIAALSTIGTDLKTVFSTIADDLN 57
>gi|172060491|ref|YP_001808143.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171993008|gb|ACB63927.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 72
Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 40/54 (74%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++K FL++E G TAIEYGL+A LIAVAIIA +T+G L++ F+ I + ++ S
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAVAIIAGASTVGSNLSSTFSKIGTCVSSPS 57
>gi|83717974|ref|YP_440452.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis E264]
gi|167579109|ref|ZP_02371983.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis TXDOH]
gi|167617224|ref|ZP_02385855.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis Bt4]
gi|257141099|ref|ZP_05589361.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis E264]
gi|83651799|gb|ABC35863.1| Flp/Fap pilin component superfamily [Burkholderia thailandensis
E264]
Length = 72
Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
H +L+DES +AIEY L+ASLIA+ II +V +G L +VF+ ++S +
Sbjct: 22 HAFMCWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72
>gi|254780734|ref|YP_003065147.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040411|gb|ACT57207.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str.
psy62]
Length = 62
Score = 61.1 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 43/58 (74%), Positives = 44/58 (75%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
MKMHIVKNFLQDESGATAIEYGLL SLIAV II SVTTLGGKL F I + S
Sbjct: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
>gi|221066742|ref|ZP_03542847.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
gi|220711765|gb|EED67133.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
Length = 61
Score = 61.1 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 41/55 (74%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ +K F +DE GATAIEYGL+A L+AV II ++T+LG +L+A+F +S KL +
Sbjct: 3 NFIKTFCKDEKGATAIEYGLIAGLVAVGIIFALTSLGTELSALFDRVSEKLKGAT 57
>gi|222087312|ref|YP_002545849.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221724760|gb|ACM27916.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
M V+ F D +GAT +EYGL+A+L++VAI++ + GG LT VF +S+ LN
Sbjct: 1 MRSVRRFFNDRTGATVVEYGLIAALMSVAIVSGLGAFGGSLTNVFNLVSNTLNGP 55
>gi|53723203|ref|YP_112188.1| pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76818831|ref|YP_336464.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|52213617|emb|CAH39671.1| putative pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76583304|gb|ABA52778.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
Length = 72
Score = 60.7 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+L+DES +AIEY L+ASLIA+ II +V +G L +VF+ ++S +
Sbjct: 22 RAFMRWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72
>gi|187479019|ref|YP_787043.1| pilin subunit [Bordetella avium 197N]
gi|115423605|emb|CAJ50144.1| putative pilin subunit [Bordetella avium 197N]
Length = 71
Score = 60.7 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ F +DE GATAIEYGL+A LIAV IIA +T LGG L +F I++ L
Sbjct: 5 LSAFWRDEDGATAIEYGLIAGLIAVVIIAGLTALGGGLNGLFTRINNAL 53
>gi|222084466|ref|YP_002542995.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221721914|gb|ACM25070.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 40/55 (72%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ FL+DESGATAIEYGL+A+LI+VAIIA TTLG L+ F +S K+N S
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTFNGVSDKMNTAS 57
>gi|197103822|ref|YP_002129199.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1]
gi|196477242|gb|ACG76770.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1]
Length = 58
Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
V FL+DESGATAIEYGL+A+LIAV ++ ++ +G L F DIS+K++
Sbjct: 3 KFVTRFLKDESGATAIEYGLIAALIAVVLVGALQLVGTSLDTKFRDISTKVSTAG 57
>gi|94309597|ref|YP_582807.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353449|gb|ABF07538.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+K FL+D+ G TAIEYGL+A+LIAV IIASV +G L+++F I+S+L+
Sbjct: 8 LKAFLRDDDGVTAIEYGLIAALIAVVIIASVQLVGTNLSSIFNTIASELS 57
>gi|27379923|ref|NP_771452.1| fimbriae associated protein [Bradyrhizobium japonicum USDA 110]
gi|27353076|dbj|BAC50077.1| bsl4812 [Bradyrhizobium japonicum USDA 110]
Length = 69
Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ +KNFL DE GATAIEYGL+A+ IA+A+I V +G KL F IS+ L
Sbjct: 18 NTLKNFLADERGATAIEYGLIAAGIALAVITVVNGMGSKLNTKFGSISTSLK 69
>gi|171317109|ref|ZP_02906312.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
gi|171097743|gb|EDT42570.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
Length = 68
Score = 59.5 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 41/54 (75%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++K FL++E G TAIEYGL+A LIAVAI+A VT++GG L +F ++ + + ++
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAVAIVAGVTSIGGSLGTMFTNLGTCVTTRT 57
>gi|254293211|ref|YP_003059234.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
gi|254041742|gb|ACT58537.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
Length = 59
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 41/51 (80%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++K F +DESGATAIEYGL+A+LI+VAII V+T+G K +A F +S KL
Sbjct: 3 NLMKKFFKDESGATAIEYGLIAALISVAIIGGVSTVGTKTSATFDAVSEKL 53
>gi|222084465|ref|YP_002542994.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221721913|gb|ACM25069.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ FL+DESGATAIEYGL+A+LI+VAIIA TTLG L+ F IS+K+N S
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTFNGISTKMNTAS 57
>gi|172065268|ref|YP_001815980.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171997510|gb|ACB68427.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 60
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ V+ F+QDE G TAIEYGL+A+LIAV ++A++T +G L VF I+ LN
Sbjct: 5 IQKVRGFVQDEQGVTAIEYGLIAALIAVTLVAALTLVGKDLNDVFNTIADDLNAA 59
>gi|186474098|ref|YP_001861440.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
gi|184196430|gb|ACC74394.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
Length = 58
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+ +K FL++E G +AIEYGLLA LI+VAII +V +G L VF+ I +KL
Sbjct: 3 NAIKQFLREEDGVSAIEYGLLAGLISVAIITTVGLIGTNLNTVFSTIQTKLAA 55
>gi|83859354|ref|ZP_00952875.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii
HTCC2633]
gi|83852801|gb|EAP90654.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii
HTCC2633]
Length = 69
Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 42/54 (77%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
++V FL+DESGATAIEYGL+A+LIAV II +VTTLG L+ F ++ ++L+
Sbjct: 3 NLVSRFLKDESGATAIEYGLIAALIAVVIITAVTTLGTNLSTTFTNVGTQLSTA 56
>gi|113866749|ref|YP_725238.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
gi|113525525|emb|CAJ91870.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
Length = 62
Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++K F++DE G TAIEYGL+A+LIAV II SVT +G L +F I L
Sbjct: 7 MIKQFIRDEDGVTAIEYGLIAALIAVVIIVSVTLIGTNLNLIFKYIGDTLT 57
>gi|110632962|ref|YP_673170.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1]
gi|110283946|gb|ABG62005.1| Flp/Fap pilin component [Chelativorans sp. BNC1]
Length = 57
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+++ F ++ESGATAIEYGL+A LIAV II + +G + F I+++LNP
Sbjct: 3 NLLTRFAKNESGATAIEYGLIAGLIAVVIITAAGLVGTDVRDSFQAIANRLNP 55
>gi|115361028|ref|YP_778165.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115286356|gb|ABI91831.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 60
Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ V+ F+QDE G TAIEYGL+A+LIAV ++A++T +G L VF I+ LN
Sbjct: 5 IQKVRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLNAA 59
>gi|187927693|ref|YP_001898180.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724583|gb|ACD25748.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 55
Score = 58.4 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ +K F +DE G TAIEYGL+A+LIAV IIASV +G L+ VF++I++ L
Sbjct: 4 LNALKQFARDEDGVTAIEYGLIAALIAVVIIASVKLVGQNLSTVFSNIAAAL 55
>gi|300021850|ref|YP_003754461.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
gi|299523671|gb|ADJ22140.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
Length = 59
Score = 58.4 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M+I F+ DESGATAIEYGL+A+LI VA++ + +G L+ F + L
Sbjct: 1 MNIFSRFMNDESGATAIEYGLIAALIGVALVTILGQVGTSLSGTFTKVDDALK 53
>gi|296156486|ref|ZP_06839324.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
gi|295893085|gb|EFG72865.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
Length = 62
Score = 58.0 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ ++ FL++E G AIEYGLLA LIAVAIIA++TT+G KL VF + + LN
Sbjct: 3 NTIQQFLREEDGVAAIEYGLLAGLIAVAIIATITTVGSKLNNVFTYVQNALN 54
>gi|159184218|ref|NP_353257.2| components of type IV pilus, pilin subunit [Agrobacterium
tumefaciens str. C58]
gi|159139547|gb|AAK86042.2| components of type IV pilus, pilin subunit [Agrobacterium
tumefaciens str. C58]
Length = 63
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 35/52 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
I FL+DESGATAIEYGL+A+LI+VAII +TLGGKL F I
Sbjct: 3 KIFARFLKDESGATAIEYGLIAALISVAIIGGASTLGGKLKDTFTFIGKSFT 54
>gi|299532816|ref|ZP_07046203.1| pilus subunit protein PilA [Comamonas testosteroni S44]
gi|298719040|gb|EFI60010.1| pilus subunit protein PilA [Comamonas testosteroni S44]
Length = 58
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
MK I+K F +DE GATAIEYGL+A LIA ++ + T LGG L +F I L +
Sbjct: 1 MKDQIIK-FWRDEEGATAIEYGLIAGLIAAGLVITFTDLGGALKTLFEKIKDALPQAT 57
>gi|15963891|ref|NP_384244.1| putative pilin subunit protein [Sinorhizobium meliloti 1021]
gi|307315788|ref|ZP_07595302.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307320423|ref|ZP_07599840.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|15073066|emb|CAC41525.1| Putative pilin subunit [Sinorhizobium meliloti 1021]
gi|306893989|gb|EFN24758.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306898556|gb|EFN29229.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 60
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
I ++DESGATAIEYGL+A+LI+VA+I TLGG L+ F ++ LN
Sbjct: 4 IFARLMKDESGATAIEYGLIAALISVALIGGAQTLGGALSTQFTNLGGYLN 54
>gi|332716312|ref|YP_004443778.1| fimbriae associated protein [Agrobacterium sp. H13-3]
gi|325062997|gb|ADY66687.1| fimbriae associated protein [Agrobacterium sp. H13-3]
Length = 63
Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+H F +DE+GATA+EYGL+ +I+ AII T + G + VF ++
Sbjct: 9 LHCFIRFFKDENGATAVEYGLIVGVISAAIIGGATAISGNINTVFQFLADAF 60
>gi|323137422|ref|ZP_08072500.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322397409|gb|EFX99932.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 36/52 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
I F++DESGATAIEYGL+ASLI VAIIA V LG L+ FA +S L
Sbjct: 2 NKIFSRFVKDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNL 53
>gi|116249978|ref|YP_765816.1| pilus subunit protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115254626|emb|CAK05700.1| putative pilus subunit protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 61
Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+ FL+DESGATAIEYGL+A+LI+VA+I TTLG ++ F ++ +K+N
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATTLGDRIGTTFNNLGTKMNT 55
>gi|134291862|ref|YP_001115631.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134135051|gb|ABO59376.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 60
Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ V+ F+QDE G TAIEYGL+A+LIAV ++A++T +G L VF I+ LN
Sbjct: 5 IQKVRGFVQDEQGVTAIEYGLIAALIAVGLVAALTLVGNDLKTVFNTIADDLNAA 59
>gi|325291662|ref|YP_004277526.1| components of type IV pilus, pilin subunit [Agrobacterium sp.
H13-3]
gi|325059515|gb|ADY63206.1| components of type IV pilus, pilin subunit [Agrobacterium sp.
H13-3]
Length = 62
Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I FL+DESGATAIEYGL+A+LI+VAII T +G +L A F +S ++N +
Sbjct: 3 KIFTRFLKDESGATAIEYGLIAALISVAIIGGATAVGTRLNAFFTALSQRINANA 57
>gi|167841420|ref|ZP_02468104.1| putative pilus subunit protein [Burkholderia thailandensis
MSMB43]
Length = 56
Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ K F++DE G +AIEYGL+A+LIAV II +V +G L +VF I S L
Sbjct: 5 IQYAKQFVRDEGGVSAIEYGLIAALIAVVIIGAVKAVGTDLNSVFTTIGSDL 56
>gi|163757623|ref|ZP_02164712.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
gi|162285125|gb|EDQ35407.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
Length = 120
Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ + F +D++G TAIEYGL+ +LI+V+IIA TLG + F ++ K+N
Sbjct: 61 LKFFECFAKDKTGTTAIEYGLIGTLISVSIIAGAMTLGNTVGNQFQGLADKMN 113
>gi|73542324|ref|YP_296844.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72119737|gb|AAZ62000.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 61
Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
++K F++DE G TAIEYGL+A+LIAV IIASV +G +L + F+ I + L
Sbjct: 7 MLKQFIRDEEGVTAIEYGLIAALIAVVIIASVAIVGTQLNSTFSKIGTSLTSA 59
>gi|241207154|ref|YP_002978250.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240861044|gb|ACS58711.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 62
Score = 57.2 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 41/53 (77%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+ FL+DESGATAIEYGL+A+LI+VA+I T+LGGK+ VF +S+K++
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGGKIGNVFNGLSTKMDT 55
>gi|170701158|ref|ZP_02892131.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133939|gb|EDT02294.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 60
Score = 57.2 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ V+ F+QDE G TAIEYGL+A+LIAV ++A++T +G L VF I+ LN
Sbjct: 5 IQKVRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLNAA 59
>gi|218461609|ref|ZP_03501700.1| pilus subunit protein [Rhizobium etli Kim 5]
Length = 61
Score = 57.2 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ FL+DESGATAIEYGL+A+LI+VA+I T+LG K+ VF +S+K++
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGTKIGNVFTGLSTKMD 54
>gi|90423865|ref|YP_532235.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90105879|gb|ABD87916.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 60
Score = 57.2 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 40/55 (72%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+IV FL+DESGATAIEYGL+ASLIA+AII ++TT+G L+ ++ + L
Sbjct: 2 NNIVMKFLKDESGATAIEYGLIASLIALAIITALTTIGSNLSTKLGEVGAALTTP 56
>gi|222147185|ref|YP_002548142.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
gi|221734175|gb|ACM35138.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
Length = 61
Score = 57.2 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (74%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I F++DESGATAIEYGL+A+LI+VA++A TTLG + F ++++++N +
Sbjct: 3 KIFSRFMKDESGATAIEYGLIAALISVALVAGATTLGTSIGNTFNNLTTQMNKGA 57
>gi|329847249|ref|ZP_08262277.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
gi|328842312|gb|EGF91881.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
Length = 59
Score = 57.2 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 35/54 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
F +DESGATAIEYGL+A+LIAVA+I+ + TL G LT F +S L
Sbjct: 3 KFFNRFAKDESGATAIEYGLIAALIAVALISILGTLSGSLTGTFQRVSDDLTAA 56
>gi|190889878|ref|YP_001976420.1| pilus subunit protein [Rhizobium etli CIAT 652]
gi|190695157|gb|ACE89242.1| pilus subunit protein [Rhizobium etli CIAT 652]
gi|327194697|gb|EGE61543.1| pilus subunit protein [Rhizobium etli CNPAF512]
Length = 61
Score = 56.8 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 40/55 (72%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ FL+DESGATAIEYGL+A+LI+VA+I T+LG K+ F +S+K++ +
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLSTKMDGAT 57
>gi|150398538|ref|YP_001329005.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419]
gi|150030053|gb|ABR62170.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 61
Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
I ++DESGATAIEYGL+A+LI+VA+I TLGG L F ++S+ L+
Sbjct: 4 IFTRLMKDESGATAIEYGLIAALISVALIGGAQTLGGALDTQFNNLSTFLS 54
>gi|299132284|ref|ZP_07025479.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
gi|298592421|gb|EFI52621.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
Length = 56
Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 38/54 (70%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+++ F++DESGATAIEY L+A+ I+V II +V TLG L VF I+ KL +
Sbjct: 3 NLLARFVKDESGATAIEYALIAAGISVVIIGAVQTLGSTLNGVFTTINGKLTAQ 56
>gi|220923697|ref|YP_002498999.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219948304|gb|ACL58696.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 54
Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F++DESGATAIEYGL+A LIAV II +VTT+G +L F I + L
Sbjct: 3 NLFTRFVKDESGATAIEYGLIAGLIAVVIITAVTTIGTRLNTKFTAIGTALQ 54
>gi|114568967|ref|YP_755647.1| Flp/Fap pilin component [Maricaulis maris MCS10]
gi|114339429|gb|ABI64709.1| Flp/Fap pilin component [Maricaulis maris MCS10]
Length = 52
Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M ++ F +DESGATAIEYGL+A+LIAV II +VT LG ++ F ++ L
Sbjct: 1 MKMISRFFKDESGATAIEYGLIAALIAVVIIGAVTALGTGVSDNFNTVAGAL 52
>gi|218680428|ref|ZP_03528325.1| Flp/Fap pilin component [Rhizobium etli CIAT 894]
Length = 62
Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+ FL+DESGATAIEYGL+A+LI+VA+I T+LGGK+ F +S+K++
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGGKIGNTFNGLSTKMDT 55
>gi|209551756|ref|YP_002283673.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537512|gb|ACI57447.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 61
Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ FL+DESGATAIEYGL+A+LI+VA+I T LGGK+ F +S+K++ +
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATALGGKIGNTFNGLSTKMDGAT 57
>gi|254293165|ref|YP_003059188.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
gi|254041696|gb|ACT58491.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
Length = 67
Score = 56.8 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+++ F D+SGATAIEYGL+ASLIAVAII SV +G + + F ++S+K +
Sbjct: 9 LLQKFCADKSGATAIEYGLIASLIAVAIITSVEVVGTENSKNFDNVSTKWDEA 61
>gi|239831632|ref|ZP_04679961.1| component of type IV pilus, pilin subunit protein [Ochrobactrum
intermedium LMG 3301]
gi|239823899|gb|EEQ95467.1| component of type IV pilus, pilin subunit protein [Ochrobactrum
intermedium LMG 3301]
Length = 62
Score = 56.8 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ F ++ESGATAIEY L+A LIAV II TLGG + F DI++K+
Sbjct: 3 KLIARFRKNESGATAIEYALIAGLIAVVIIVGAQTLGGAINDKFDDIATKV 53
>gi|295690802|ref|YP_003594495.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756]
gi|295432705|gb|ADG11877.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756]
Length = 59
Score = 56.8 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 35/55 (63%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
V FL+DESGATAIEYGL+ +LIAV I+ +VTTLG KL F + +
Sbjct: 3 KFVTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTKLGTAFGKAGDAIEKPA 57
>gi|198284419|ref|YP_002220740.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC
53993]
gi|198248940|gb|ACH84533.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 69
Score = 56.8 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
H V F+++E G TAIEYGL+A LIAVAII SV LG KL ++F+ I+ +L
Sbjct: 6 HAVARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQLKVP 59
>gi|253996773|ref|YP_003048837.1| Flp/Fap pilin component [Methylotenera mobilis JLW8]
gi|253983452|gb|ACT48310.1| Flp/Fap pilin component [Methylotenera mobilis JLW8]
Length = 64
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
V+ F+ DE G TAIEY L+A+LIAV IIA+VTT G ++ F +++ L
Sbjct: 8 VQRFINDEEGVTAIEYALIAALIAVVIIAAVTTTGTRVCETFRSVATALGGA 59
>gi|329890999|ref|ZP_08269342.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
gi|328846300|gb|EGF95864.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
Length = 59
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+ + F +DESGATAIEYGL+A+L+AV IIA + L L F ++ +++
Sbjct: 3 NFITRFAKDESGATAIEYGLIAALMAVIIIAGIGFLKPGLEGAFKNVGGQMSK 55
>gi|222147186|ref|YP_002548143.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
gi|221734176|gb|ACM35139.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
Length = 61
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 41/55 (74%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I F++DESGATAIEYGL+A+LI+VA++A T+LG L F ++++++N +
Sbjct: 3 KIFARFMKDESGATAIEYGLIAALISVALVAGATSLGSSLNNTFTNLTTQMNKAA 57
>gi|170740624|ref|YP_001769279.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
gi|168194898|gb|ACA16845.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
Length = 54
Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++K F +DESGATAIEYGLLA+LIAVA+I + ++G L ++F ++ L
Sbjct: 4 MLKRFAKDESGATAIEYGLLATLIAVALITAAQSVGSNLNSMFQKVAGNLK 54
>gi|78060319|ref|YP_366894.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964869|gb|ABB06250.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 63
Score = 56.1 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
F++DE G TAIEYGL+A+LIAV II +++T+G L VF+ I++ L+
Sbjct: 10 RFVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDSA 59
>gi|83721334|ref|YP_443063.1| pilin [Burkholderia thailandensis E264]
gi|167582067|ref|ZP_02374941.1| pilin, putative [Burkholderia thailandensis TXDOH]
gi|167620228|ref|ZP_02388859.1| pilin, putative [Burkholderia thailandensis Bt4]
gi|167836799|ref|ZP_02463682.1| pilin, putative [Burkholderia thailandensis MSMB43]
gi|257139293|ref|ZP_05587555.1| pilin, putative [Burkholderia thailandensis E264]
gi|83655159|gb|ABC39222.1| pilin, putative [Burkholderia thailandensis E264]
Length = 65
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 39/54 (72%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
++ F ++E+G TAIEYGL+A LIAVAI +V T+G L+++F+ I+SKL
Sbjct: 12 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSSLFSTIASKLPAA 65
>gi|146342483|ref|YP_001207531.1| putative Flp/Fap pilin component (modular protein)
[Bradyrhizobium sp. ORS278]
gi|146195289|emb|CAL79314.1| Putative Flp/Fap pilin component (modular protein)
[Bradyrhizobium sp. ORS278]
Length = 54
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
V FL+DESGATAIEYGL+A+ I++AIIA+V LG L++ F I+S L
Sbjct: 4 FVLKFLRDESGATAIEYGLIAAGISLAIIAAVNGLGTSLSSKFDSINSSLK 54
>gi|103487278|ref|YP_616839.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256]
gi|98977355|gb|ABF53506.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256]
Length = 54
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 39/54 (72%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
M +K F++D ATAIEYGL+A+LIAVA I+++ +G ++ F ++S++LN
Sbjct: 1 MKFIKKFVRDTKAATAIEYGLIAALIAVAGISAMGLVGNSVSNTFNEVSTELNK 54
>gi|167648155|ref|YP_001685818.1| Flp/Fap pilin component [Caulobacter sp. K31]
gi|167350585|gb|ABZ73320.1| Flp/Fap pilin component [Caulobacter sp. K31]
Length = 61
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 33/54 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
V FL DESGATAIEYGL+ +LIAV I VTTLGG L F ++ +
Sbjct: 3 KFVTRFLNDESGATAIEYGLIVALIAVVIATVVTTLGGSLKTTFKNVDDSVKAA 56
>gi|315497469|ref|YP_004086273.1| flp/fap pilin component [Asticcacaulis excentricus CB 48]
gi|315415481|gb|ADU12122.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48]
Length = 57
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++KNF DESGATAIEYGL+A+LIAVA+I ++ LG L A F +S KL
Sbjct: 3 NLIKNFANDESGATAIEYGLIAALIAVALITTLGALGKNLDATFKGVSDKL 53
>gi|89899599|ref|YP_522070.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
gi|89344336|gb|ABD68539.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
Length = 58
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+H ++ F+++E G TAIEYGL+A+LIAV IIASVT +G +L VF +S L
Sbjct: 4 VHFIQKFVREEEGVTAIEYGLIAALIAVVIIASVTIVGTQLAVVFGKVSDAL 55
>gi|17937222|ref|NP_534011.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58]
gi|17741918|gb|AAL44327.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58]
Length = 71
Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+H NF ++E+GATAIEYGL+A +I+ A+IA + + + AVF I
Sbjct: 17 LHFFINFCKNENGATAIEYGLIAGIISAALIAGLGNISSGINAVFQFIVDAF 68
>gi|116878542|ref|YP_842256.1| hypothetical protein Pcar_3316 [Pelobacter carbinolicus DSM 2380]
gi|114843178|gb|ABI81935.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 175
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
M M + ++ E GATA EY ++ +LI + I ++T LG K+ F +I+ L S
Sbjct: 119 MLMKC-RELIRSEEGATATEYAVMLALIIIVAIGAITFLGKKVNNTFQNIAESLPDPS 175
>gi|27376661|ref|NP_768190.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
gi|27349802|dbj|BAC46815.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
Length = 53
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/53 (60%), Positives = 39/53 (73%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M + +FL+DESGATAIEYGL+A+ I++AIIA V LG KL FA ISS L
Sbjct: 1 MKTLVHFLRDESGATAIEYGLIAAGISLAIIAVVNGLGTKLNTKFASISSSLK 53
>gi|51245391|ref|YP_065275.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila
LSv54]
gi|50876428|emb|CAG36268.1| related to pilus assembly protein pilin subunit [Desulfotalea
psychrophila LSv54]
Length = 61
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 40/53 (75%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++++ F++DESG TAIEY L+ASLIA+ IIA+VT +GG L F I++ L
Sbjct: 4 TLNMIQTFVKDESGVTAIEYALIASLIAIGIIAAVTIIGGVLNTTFQRIATAL 56
>gi|197295148|ref|YP_002153689.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944627|emb|CAR57231.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 63
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
F++DE G TAIEYGL+A+LIAV II +++T+G L VF+ I++ L+
Sbjct: 10 RFVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDSA 59
>gi|116671474|ref|YP_832407.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
gi|116611583|gb|ABK04307.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
Length = 101
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+++ DE GATA+EYG++ +LIAV II +V LGG LT +F + ++ +
Sbjct: 28 NLMIRLRSDEKGATAVEYGIMVALIAVVIIVAVGLLGGTLTTMFEQVKCQVGGGA 82
>gi|107028254|ref|YP_625349.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116686247|ref|YP_839494.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170734874|ref|YP_001773988.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105897418|gb|ABF80376.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116651962|gb|ABK12601.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169820912|gb|ACA95493.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 63
Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+ F++D+ G TAIEYGL+A+LIA+ I+ ++TT+G L VF ++ L+
Sbjct: 8 IAWFVEDQDGVTAIEYGLIAALIAIGIVGALTTVGTDLKTVFNTVADDLDS 58
>gi|323136420|ref|ZP_08071502.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322398494|gb|EFY01014.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 55.3 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/51 (60%), Positives = 37/51 (72%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+K F++DESGATAIEYGL+ASLI VAIIA V LG L+ FA +S L
Sbjct: 3 KYLKTFIRDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNL 53
>gi|76811746|ref|YP_333336.1| putative fimbriae assembly-like protein [Burkholderia
pseudomallei 1710b]
gi|126441443|ref|YP_001058803.1| pilin family protein [Burkholderia pseudomallei 668]
gi|126452952|ref|YP_001066054.1| pilin family protein [Burkholderia pseudomallei 1106a]
gi|134282265|ref|ZP_01768970.1| pilin, flp/fap family [Burkholderia pseudomallei 305]
gi|167719791|ref|ZP_02403027.1| pilin, flp/fap family protein [Burkholderia pseudomallei DM98]
gi|167738792|ref|ZP_02411566.1| pilin, flp/fap family protein [Burkholderia pseudomallei 14]
gi|167824391|ref|ZP_02455862.1| pilin, flp/fap family protein [Burkholderia pseudomallei 9]
gi|167845922|ref|ZP_02471430.1| pilin, flp/fap family protein [Burkholderia pseudomallei B7210]
gi|167894498|ref|ZP_02481900.1| pilin, flp/fap family protein [Burkholderia pseudomallei 7894]
gi|167902903|ref|ZP_02490108.1| pilin, flp/fap family protein [Burkholderia pseudomallei NCTC
13177]
gi|167911141|ref|ZP_02498232.1| pilin, flp/fap family protein [Burkholderia pseudomallei 112]
gi|217423683|ref|ZP_03455184.1| pilin, flp/fap family [Burkholderia pseudomallei 576]
gi|226199682|ref|ZP_03795235.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9]
gi|237812063|ref|YP_002896514.1| hypothetical protein GBP346_A1805 [Burkholderia pseudomallei
MSHR346]
gi|242317113|ref|ZP_04816129.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b]
gi|254179961|ref|ZP_04886560.1| pilin, flp/fap family [Burkholderia pseudomallei 1655]
gi|254188629|ref|ZP_04895140.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237]
gi|254197897|ref|ZP_04904319.1| pilin, flp/fap family [Burkholderia pseudomallei S13]
gi|254259877|ref|ZP_04950931.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a]
gi|254297797|ref|ZP_04965250.1| pilin, flp/fap family [Burkholderia pseudomallei 406e]
gi|76581199|gb|ABA50674.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei 1710b]
gi|126220936|gb|ABN84442.1| pilin, flp/fap family [Burkholderia pseudomallei 668]
gi|126226594|gb|ABN90134.1| pilin, flp/fap family [Burkholderia pseudomallei 1106a]
gi|134246303|gb|EBA46392.1| pilin, flp/fap family [Burkholderia pseudomallei 305]
gi|157806937|gb|EDO84107.1| pilin, flp/fap family [Burkholderia pseudomallei 406e]
gi|157936308|gb|EDO91978.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237]
gi|169654638|gb|EDS87331.1| pilin, flp/fap family [Burkholderia pseudomallei S13]
gi|184210501|gb|EDU07544.1| pilin, flp/fap family [Burkholderia pseudomallei 1655]
gi|217393541|gb|EEC33562.1| pilin, flp/fap family [Burkholderia pseudomallei 576]
gi|225928268|gb|EEH24302.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9]
gi|237504579|gb|ACQ96897.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242140352|gb|EES26754.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b]
gi|254218566|gb|EET07950.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a]
Length = 65
Score = 55.3 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
++ F ++E+G TAIEYGL+A LIAVAI +V T+G L+A+F+ I+SKL
Sbjct: 12 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPAA 65
>gi|224824209|ref|ZP_03697317.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
gi|224603628|gb|EEG09803.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
Length = 66
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+K F QDE G TAIEYGL+A+LIAV II SV +G +L+ VF +I++ LN
Sbjct: 14 LKQFTQDEEGVTAIEYGLIAALIAVVIITSVQAVGNQLSLVFNNIATALNTA 65
>gi|56477533|ref|YP_159122.1| Flp/Fap pilin component [Aromatoleum aromaticum EbN1]
gi|56313576|emb|CAI08221.1| INTERPRO: probable Flp/Fap pilin component [Aromatoleum
aromaticum EbN1]
Length = 56
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ ++K F++D+ G TAIEYGLLASLIA+AII LG KL +F I+ KL
Sbjct: 2 LEMMKQFVRDDEGVTAIEYGLLASLIALAIIVGAGALGTKLNTMFNFIAGKLVAA 56
>gi|187927692|ref|YP_001898179.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724582|gb|ACD25747.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 56
Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++ FL DE TAIEYGL+A+LIAV IIASV +G L+ VF++I++ L
Sbjct: 7 LLQQFLYDEQAVTAIEYGLIAALIAVVIIASVQLVGTNLSTVFSNIAAAL 56
>gi|152983319|ref|YP_001355010.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille]
gi|151283396|gb|ABR91806.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille]
Length = 59
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
MK I+ F++DE GATAIEYGL+ LI+V I SV +GG L +F +IS+ L
Sbjct: 1 MKNQII-RFMKDEEGATAIEYGLIVGLISVVIAVSVGLIGGNLQTLFTNISNALATA 56
>gi|56477532|ref|YP_159121.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
gi|56313575|emb|CAI08220.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
Length = 56
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ +++ F+ DE G TAIEYGL+ASL+A+AII LG KL VF I+ KL
Sbjct: 2 LKMLQQFIVDEDGVTAIEYGLIASLVALAIIVGAGALGTKLNDVFNFIAGKLVAA 56
>gi|206559890|ref|YP_002230654.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|198035931|emb|CAR51823.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 56
Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 40/50 (80%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
I+K FL++E G TA+EYGL+A LIAVA++++++TL G ++ F I+++L
Sbjct: 4 IIKRFLKEEDGVTAVEYGLIAGLIAVALVSAMSTLTGGISGAFTYIANQL 53
>gi|91788407|ref|YP_549359.1| Flp/Fap pilin component [Polaromonas sp. JS666]
gi|91697632|gb|ABE44461.1| Flp/Fap pilin component [Polaromonas sp. JS666]
Length = 97
Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M+ H ++N L DE+G TAIEY LL+SLI V I+ +V +G + +++ +S+ +
Sbjct: 33 MQHHPLENLLADEAGVTAIEYALLSSLIVVVILGAVGAVGSSVLSLWRLVSNCVT 87
>gi|188581657|ref|YP_001925102.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
gi|179345155|gb|ACB80567.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
Length = 64
Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+I K F+ DESGATAIEYG++A+++ VAI+ T G KL F + + LN ++
Sbjct: 3 NIAKRFIADESGATAIEYGMVAAMVGVAIVGIFTQFGSKLKDAFTTLGTGLNTQT 57
>gi|315121896|ref|YP_004062385.1| hypothetical protein CKC_00730 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495298|gb|ADR51897.1| hypothetical protein CKC_00730 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 60
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/55 (67%), Positives = 47/55 (85%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M+++I++ FLQDESGATAIEYGLLA+L+AVAIIASVTTLG KL+A F + L+
Sbjct: 1 MRINIIRKFLQDESGATAIEYGLLAALVAVAIIASVTTLGTKLSATFKRVGDSLS 55
>gi|328542085|ref|YP_004302194.1| hypothetical protein SL003B_0463 [polymorphum gilvum SL003B-26A1]
gi|326411835|gb|ADZ68898.1| hypothetical protein SL003B_0463 [Polymorphum gilvum SL003B-26A1]
Length = 71
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ ++ FL DE G TA+EYGL+ ++I+VAI+A+V ++G ++ A F +S KL
Sbjct: 15 RRSTLRRFLADERGVTAVEYGLILAMISVAIMATVLSIGEEIAADFTLLSEKLATA 70
>gi|296444399|ref|ZP_06886364.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258046|gb|EFH05108.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 54
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ +F+++ESGATAIEYGL+ +LI+V II +V +G L+ F I+ L
Sbjct: 3 NLFASFVENESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNLT 54
>gi|302381759|ref|YP_003817582.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302192387|gb|ADK99958.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 55
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ F DESGATAIEYGL+A+LIAV II ++T LG K+T F +S+ +
Sbjct: 3 KFITKFAHDESGATAIEYGLIAALIAVVIIGAITVLGEKITGTFTKVSTAM 53
>gi|39936737|ref|NP_949013.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|192292563|ref|YP_001993168.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|39650593|emb|CAE29116.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
gi|192286312|gb|ACF02693.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 54
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+IV F++DESGATAIEYGL+A+ I++AIIA+V L GKL + F + + L
Sbjct: 3 NIVARFIKDESGATAIEYGLIAAGISLAIIAAVQGLAGKLNSTFTSVQNALK 54
>gi|116254028|ref|YP_769866.1| pilus component protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115258676|emb|CAK09780.1| putative pilus component protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 55
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M I+K FL D+ GATAIEYGL+A+LI A+++ + G L VF I++ +
Sbjct: 1 MRILKAFLADDRGATAIEYGLIAALICGALVSGLGVFTGALQGVFNVINNNMT 53
>gi|311107636|ref|YP_003980489.1| Flp/Fap pilin component family protein [Achromobacter
xylosoxidans A8]
gi|310762325|gb|ADP17774.1| Flp/Fap pilin component family protein [Achromobacter
xylosoxidans A8]
Length = 65
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ F DE G TA+EYGL+A ++AVA+I +V G L +F ++ +KL+
Sbjct: 5 LAQFWNDEDGITALEYGLIAGMVAVALIVAVGAFTGSLKGMFEELGTKLD 54
>gi|170701748|ref|ZP_02892684.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133331|gb|EDT01723.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 54
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 40/50 (80%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++K FL++E G TAIEYGL+A LIA II SVTT+G K++A+F+ I+S L
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKISALFSTIASSL 53
>gi|300694115|ref|YP_003750088.1| flp/fap pilin component [Ralstonia solanacearum PSI07]
gi|299076152|emb|CBJ35465.1| putative Flp/Fap pilin component [Ralstonia solanacearum PSI07]
Length = 58
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
H + FL+DE GATAIEYGL+A LIA I +V LG ++ VF + + + +
Sbjct: 3 HAILQFLRDEQGATAIEYGLIAGLIAAVIAVAVGKLGTEINTVFGTVCTAVKGSA 57
>gi|254502369|ref|ZP_05114520.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11]
gi|222438440|gb|EEE45119.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11]
Length = 58
Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ F +DESGATAIEYGL+A L++VAII + T+G LT++F+ I S L S
Sbjct: 4 LFSRFAKDESGATAIEYGLIAGLLSVAIIGILVTMGDSLTSIFSQIDSALKTGS 57
>gi|53719513|ref|YP_108499.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei K96243]
gi|167816015|ref|ZP_02447695.1| pilin, flp/fap family protein [Burkholderia pseudomallei 91]
gi|167919164|ref|ZP_02506255.1| pilin, flp/fap family protein [Burkholderia pseudomallei BCC215]
gi|52209927|emb|CAH35899.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei K96243]
Length = 56
Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
++ F ++E+G TAIEYGL+A LIAVAI +V T+G L+A+F+ I+SKL
Sbjct: 3 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPAA 56
>gi|330816711|ref|YP_004360416.1| Flp/Fap pilin component [Burkholderia gladioli BSR3]
gi|327369104|gb|AEA60460.1| Flp/Fap pilin component [Burkholderia gladioli BSR3]
Length = 57
Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
++ FL++E G TA+EYGL+A L+AVA++A VT L G + +F + L+
Sbjct: 4 LINRFLKEEDGVTAVEYGLIAGLMAVALVAGVTALSGSIQNLFTYLKGVLDAA 56
>gi|167570110|ref|ZP_02362984.1| pilin, putative [Burkholderia oklahomensis C6786]
Length = 65
Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
++ FL +E+G TAIEYGL+A LIAVAI +V TLG L+ +F+ I+ KL
Sbjct: 12 QLMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFSTIAGKLPAA 65
>gi|303247320|ref|ZP_07333593.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
gi|302491234|gb|EFL51123.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
Length = 56
Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ + F++DE GATA+EYGL+A+LIA I+ VTTLG L+ F I++ +
Sbjct: 2 LRAITKFVRDEEGATAVEYGLMAALIAAVIVGVVTTLGQNLSTTFDSIATSIK 54
>gi|302381760|ref|YP_003817583.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302192388|gb|ADK99959.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 55
Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ F QDESGATAIEYGL+A+LIAV II ++TTLG K+T F +++ +
Sbjct: 3 KFITKFAQDESGATAIEYGLIAALIAVVIIGAITTLGTKITGTFTKVANAM 53
>gi|107022590|ref|YP_620917.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116689539|ref|YP_835162.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170732843|ref|YP_001764790.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105892779|gb|ABF75944.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116647628|gb|ABK08269.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169816085|gb|ACA90668.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 56
Score = 54.1 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 39/50 (78%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
I+K FL++E G TA+EYGL+A LIAVA++ +++TL ++ F+ I+SKL
Sbjct: 4 IIKRFLKEEDGVTAVEYGLIAGLIAVALVTAMSTLTTGISGAFSYIASKL 53
>gi|167562919|ref|ZP_02355835.1| pilin, putative [Burkholderia oklahomensis EO147]
Length = 65
Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
++ FL +E+G TAIEYGL+A LIAVAI +V TLG L+ +F I+ KL
Sbjct: 12 QLMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFTTIAGKLPAA 65
>gi|220922776|ref|YP_002498078.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947383|gb|ACL57775.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 56
Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++K F +DESGATAIEYGLLA+LIAVA+I + ++GG L ++F ++ L
Sbjct: 4 MLKRFAKDESGATAIEYGLLATLIAVALITAAKSVGGNLNSMFTKVAGNLAT 55
>gi|154250533|ref|YP_001411357.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154154483|gb|ABS61700.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 96
Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVT--TLGGKLTAVFADISSKLNPKS 58
++ F++DESG +A+EYGLLA+ IAV + A V +GG L VF +S L+ +
Sbjct: 36 FLRRFMKDESGISAVEYGLLAAGIAVGLWAFVGPDGIGGTLQGVFESVSDDLSEAA 91
>gi|186474099|ref|YP_001861441.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
gi|184196431|gb|ACC74395.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
Length = 58
Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ ++ FL +E G +AIEYGLLA LIAVAII +V +GG L +VF I +KL +
Sbjct: 3 NAIQQFLGEEDGVSAIEYGLLAGLIAVAIITTVGLVGGSLNSVFNTIQTKLAAIT 57
>gi|85713501|ref|ZP_01044491.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
gi|85699405|gb|EAQ37272.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
Length = 56
Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
MK ++ FL+DESGATAIEYGL+A+ IAVAII +V TLG L F ++ L+ K
Sbjct: 1 MK-NLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFQNVQDDLHKK 56
>gi|209884566|ref|YP_002288423.1| hypothetical protein OCAR_5426 [Oligotropha carboxidovorans OM5]
gi|209872762|gb|ACI92558.1| conserved domain protein [Oligotropha carboxidovorans OM5]
Length = 53
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M +K FL+D+SGAT+IEY ++A+ IAV II +V LG L + I + +
Sbjct: 1 MKTLKRFLRDQSGATSIEYAMIAAGIAVVIIVAVNNLGSALNGKYEMIRTSVQ 53
>gi|83747921|ref|ZP_00944953.1| putative pilin protein [Ralstonia solanacearum UW551]
gi|207724793|ref|YP_002255190.1| pilin protein [Ralstonia solanacearum MolK2]
gi|207739462|ref|YP_002257855.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|83725454|gb|EAP72600.1| putative pilin protein [Ralstonia solanacearum UW551]
gi|206590018|emb|CAQ36979.1| pilin protein [Ralstonia solanacearum MolK2]
gi|206592838|emb|CAQ59744.1| pilin protein [Ralstonia solanacearum IPO1609]
Length = 58
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
H + FL+DE GATAIEYGL+A LIA I +VTTLG ++ F ++ S + +
Sbjct: 3 HAILKFLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCSAIKGSA 57
>gi|220913388|ref|YP_002488697.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860266|gb|ACL40608.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 70
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+K+ E GATA+EYG++ LIAV II +V+TLGG L F I+++L PK+
Sbjct: 15 LKDRFSSEKGATAVEYGIMVGLIAVVIIVAVSTLGGTLDGFFDSINTELAPKT 67
>gi|260892921|ref|YP_003239018.1| Flp/Fap pilin component [Ammonifex degensii KC4]
gi|260865062|gb|ACX52168.1| Flp/Fap pilin component [Ammonifex degensii KC4]
Length = 57
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+ + +DE G EYGL+ +LIA+ +I ++T LG + F +S +LN
Sbjct: 2 LAFWRELWRDEEGQGMAEYGLILALIAIVVIIALTALGTSIRDKFQKVSDELNK 55
>gi|307943139|ref|ZP_07658484.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773935|gb|EFO33151.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 60
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++ F +DESGATAIEYGL+A LI++ II VT +G L ++F ISS L
Sbjct: 3 NVISRFAKDESGATAIEYGLIAGLISITIIGVVTAVGTNLNSLFTTISSTL 53
>gi|300697746|ref|YP_003748407.1| Flp/Fap pilin component [Ralstonia solanacearum CFBP2957]
gi|299074470|emb|CBJ54020.1| putative Flp/Fap pilin component [Ralstonia solanacearum
CFBP2957]
Length = 58
Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
H + FL+DE GATAIEYGL+A LIA I +VTTLG ++ F ++ + + +
Sbjct: 3 HAILKFLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCTAIKGSA 57
>gi|116694136|ref|YP_728347.1| fimbriae associated protein [Ralstonia eutropha H16]
gi|113528635|emb|CAJ94982.1| fimbriae associated protein [Ralstonia eutropha H16]
Length = 58
Score = 53.8 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F++DE GATAIEYGL+ L+A+AI LG +L A F +S ++
Sbjct: 3 RLIARFIKDERGATAIEYGLIVGLVALAIAVGAGKLGTELNASFDRLSVTVS 54
>gi|227818618|ref|YP_002822589.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234]
gi|36958874|gb|AAQ87299.1| pilA [Sinorhizobium fredii NGR234]
gi|227337617|gb|ACP21836.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234]
Length = 53
Score = 53.8 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++ F+++ESGATAIEYGL+A LIAV II++V +G + A F IS+ L
Sbjct: 3 NLLVRFVRNESGATAIEYGLIAGLIAVVIISAVQLVGTDIGAKFTAISTAL 53
>gi|134299956|ref|YP_001113452.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1]
gi|134052656|gb|ABO50627.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1]
Length = 59
Score = 53.8 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 38/55 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++ N L++E+G EYGL+ +LIAV + ++TTLG LTA F D+++KL P +
Sbjct: 3 QMLMNLLKEENGQGMAEYGLILALIAVVCVGALTTLGNGLTAKFTDVNAKLTPAA 57
>gi|315121899|ref|YP_004062388.1| hypothetical protein CKC_00745 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495301|gb|ADR51900.1| hypothetical protein CKC_00745 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 55
Score = 53.8 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++ K L+DESG +EYGLLA+L+A+ I ++T LG KLT F +S KL
Sbjct: 2 VNCFKKMLKDESGTAFLEYGLLAALVAIVAIGAITNLGTKLTGTFTTVSDKLKA 55
>gi|78060320|ref|YP_366895.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964870|gb|ABB06251.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 63
Score = 53.4 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 38/52 (73%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ F+QD+ G TAIEYGL+A+LIA+ I+ ++TT+G L VF+ I++ L+
Sbjct: 8 IAWFVQDQDGVTAIEYGLIAALIAIGIVVALTTIGTDLKTVFSTIAADLDSA 59
>gi|17549313|ref|NP_522653.1| putative pilin protein [Ralstonia solanacearum GMI1000]
gi|17431565|emb|CAD18243.1| putative pilin protein [Ralstonia solanacearum GMI1000]
Length = 58
Score = 53.4 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
H + FL+DE GATAIEYGLLA LIA I +VTTLG ++ F ++ + + +
Sbjct: 3 HAILQFLRDEQGATAIEYGLLAGLIAAVIAGTVTTLGTEIKTAFGNVCTAIKGSA 57
>gi|188592028|ref|YP_001796626.1| flp/fap pilin component [Cupriavidus taiwanensis LMG 19424]
gi|170938402|emb|CAP63389.1| putative Flp/Fap pilin component [Cupriavidus taiwanensis LMG
19424]
Length = 58
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F++DE GATAIEYGL+ LIA+ + LG +L + +S K++
Sbjct: 3 RLIARFIKDERGATAIEYGLIVGLIALGLTVGAGKLGDELNLSYERLSVKIS 54
>gi|309778773|ref|ZP_07673546.1| conserved domain protein [Ralstonia sp. 5_7_47FAA]
gi|308922481|gb|EFP68105.1| conserved domain protein [Ralstonia sp. 5_7_47FAA]
Length = 59
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ + FL+DE GATA+EYG++A LIA AI V LG +L VF +I + + +
Sbjct: 3 NAILKFLRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICTAVKGGT 57
>gi|293606496|ref|ZP_06688854.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292815119|gb|EFF74242.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 58
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ F DE G TA+EYGL+A L+AVA+IA+V T L+ +F + +KL+
Sbjct: 5 LAQFWNDEDGITALEYGLIAGLVAVALIAAVGTFTDALSNMFTGLGAKLDAA 56
>gi|255613581|ref|XP_002539522.1| conserved hypothetical protein [Ricinus communis]
gi|223505367|gb|EEF22861.1| conserved hypothetical protein [Ricinus communis]
Length = 243
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+++V F++DESGATAIEYGL+A+ IA+AII V LG L F IS+ L
Sbjct: 190 SVNLVARFVKDESGATAIEYGLIAAGIALAIITVVNNLGTTLNTKFTSISTSLK 243
>gi|110636419|ref|YP_676627.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1]
gi|110287403|gb|ABG65462.1| Flp/Fap pilin component [Chelativorans sp. BNC1]
Length = 60
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 38/54 (70%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ FL+DESGATA+EYGL+ +LIA IIA V ++GG++T F +S+ L +
Sbjct: 4 LFARFLKDESGATAVEYGLIVALIAAGIIAVVGSIGGQITNAFTRVSTGLTGEG 57
>gi|51245390|ref|YP_065274.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila
LSv54]
gi|50876427|emb|CAG36267.1| related to pilus assembly protein pilin subunit [Desulfotalea
psychrophila LSv54]
Length = 59
Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ +++ F++DESG TAIEYGL+A+LIAV IIA+VT +G L F I++ L
Sbjct: 4 TLSMIRTFVKDESGVTAIEYGLIAALIAVVIIAAVTAVGVALNTTFQRIATALESA 59
>gi|192289401|ref|YP_001990006.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|192283150|gb|ACE99530.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 56
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+V FL +ESGATAIEYGL+A+ I++AII +VT LG KL + F + L
Sbjct: 3 RLVLKFLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLT 54
>gi|39933982|ref|NP_946258.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|39647829|emb|CAE26349.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
Length = 57
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+V FL +ESGATAIEYGL+A+ I++AII +VT LG KL + F + L
Sbjct: 3 RLVLKFLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLT 54
>gi|115351452|ref|YP_773291.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115281440|gb|ABI86957.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 54
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++K FL++E G TAIEYGL+A LIA II SVTT+G K+ A+F+ I+S L
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKIAALFSTIASSL 53
>gi|254473429|ref|ZP_05086826.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp.
JE062]
gi|211957545|gb|EEA92748.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp.
JE062]
Length = 55
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ FL+DESGATAIEYG+LA+L+AV +IA+V LG K+ +F IS+ +
Sbjct: 1 MFAKFLKDESGATAIEYGILAALMAVIVIAAVPLLGDKIVTLFKGISTSFS 51
>gi|190893600|ref|YP_001980142.1| pilus component protein [Rhizobium etli CIAT 652]
gi|190698879|gb|ACE92964.1| putative pilus component protein [Rhizobium etli CIAT 652]
Length = 55
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M ++K F D++GATA+EYGL+A++I A+++ + G L VF+ +S+ +
Sbjct: 1 MRLLKAFFADDTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNIT 53
>gi|241206511|ref|YP_002977607.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860401|gb|ACS58068.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 55
Score = 53.0 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M ++K F+ D GATAIEYGL+A+LI A+++++ G L VF I++ L
Sbjct: 1 MRLLKAFVADNRGATAIEYGLVAALIGGALVSALGIFSGSLQDVFNVINNNLT 53
>gi|225872751|ref|YP_002754208.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC
51196]
gi|225793767|gb|ACO33857.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC
51196]
Length = 106
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 34/54 (62%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++ N LQDESG IEY L+A+LI +A +A+++ + + F ++++L +
Sbjct: 52 VLNNLLQDESGQDLIEYALVAALIGLAAVAAMSGVANGIKNAFNSVNNQLTTAT 105
>gi|220924565|ref|YP_002499867.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219949172|gb|ACL59564.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 40/50 (80%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+VK F+ DESGATAIEYGLLA+LIAVA+I + +++G L+++F I+ L
Sbjct: 1 MVKRFIVDESGATAIEYGLLATLIAVALITAASSVGTNLSSLFNKIAGNL 50
>gi|296444400|ref|ZP_06886365.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258047|gb|EFH05109.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 54
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F+ +ESGATAIEYGL+ +LI+V II +V +G L+ F I+ L
Sbjct: 4 MIARFVGNESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNLT 54
>gi|187926423|ref|YP_001892768.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|241665910|ref|YP_002984269.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|187728177|gb|ACD29341.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|240867937|gb|ACS65597.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
Length = 59
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ + F++DE GATA+EYG++A LIA AI V LG +L VF +I + + +
Sbjct: 3 NAILKFIRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICTAVKGGT 57
>gi|46204006|ref|ZP_00209209.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 68
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+I K F+ DESGATAIEYGL+A+++ +A++A G KLT F + + LN ++
Sbjct: 7 NIAKRFIADESGATAIEYGLVAAMMGIAVVAVFKAFGSKLTTAFETLGTSLNTQT 61
>gi|221070071|ref|ZP_03546176.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
gi|220715094|gb|EED70462.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
Length = 54
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
MK I+K F +DE GATAIEYGL+A LIA I+ +VT LG ++ + I + ++
Sbjct: 1 MKDQIIK-FWRDEEGATAIEYGLIAGLIAAVIVGTVTLLGTRINTLLNTILTAIS 54
>gi|209886528|ref|YP_002290385.1| hypothetical protein OCAR_7417 [Oligotropha carboxidovorans OM5]
gi|209874724|gb|ACI94520.1| conserved domain protein [Oligotropha carboxidovorans OM5]
Length = 54
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F++DESGATAIEY L+A+ IAV IIA+V +G +++ F I S L
Sbjct: 3 NLFARFVKDESGATAIEYALIAAGIAVVIIAAVNGVGSAISSKFETIKSSLQ 54
>gi|126442904|ref|YP_001064072.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126456583|ref|YP_001076984.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|134281737|ref|ZP_01768444.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|167725241|ref|ZP_02408477.1| hypothetical protein BpseD_39846 [Burkholderia pseudomallei DM98]
gi|167744171|ref|ZP_02416945.1| hypothetical protein Bpse14_39228 [Burkholderia pseudomallei 14]
gi|167829709|ref|ZP_02461180.1| hypothetical protein Bpseu9_38880 [Burkholderia pseudomallei 9]
gi|167851178|ref|ZP_02476686.1| hypothetical protein BpseB_38421 [Burkholderia pseudomallei
B7210]
gi|167908125|ref|ZP_02495330.1| hypothetical protein BpseN_38236 [Burkholderia pseudomallei NCTC
13177]
gi|167916472|ref|ZP_02503563.1| hypothetical protein Bpse112_38727 [Burkholderia pseudomallei
112]
gi|217424381|ref|ZP_03455880.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|226194001|ref|ZP_03789602.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|237507574|ref|ZP_04520289.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242313440|ref|ZP_04812457.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254182588|ref|ZP_04889182.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|254192452|ref|ZP_04898891.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|254264094|ref|ZP_04954959.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
gi|126222395|gb|ABN85900.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126230351|gb|ABN93764.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|134246799|gb|EBA46886.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|169649210|gb|EDS81903.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|184213123|gb|EDU10166.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|217392846|gb|EEC32869.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|225933946|gb|EEH29932.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|234999779|gb|EEP49203.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242136679|gb|EES23082.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254215096|gb|EET04481.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
Length = 48
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+L+DES +AIEY L+ASLIA+ II +V +G L +VF+ ++S +
Sbjct: 1 MRWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|197295147|ref|YP_002153688.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944626|emb|CAR57230.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 63
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 38/52 (73%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ F+QD+ G TAIEYGL+A+LIA+ I+A++ T+G L VF+ I++ L+
Sbjct: 8 IAWFVQDQDGVTAIEYGLIAALIAIGIVAALATVGTDLKTVFSTIAADLDSA 59
>gi|188586931|ref|YP_001918476.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351618|gb|ACB85888.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 69
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+K +E G +EYGL+ +L+AV +I +++ LG + +F I+ ++ ++
Sbjct: 5 LKRLWTEEDGQGMVEYGLILALVAVVVIGALSFLGDNVAGIFEHITDEVGDET 57
>gi|118589700|ref|ZP_01547105.1| flp/fap pilin component [Stappia aggregata IAM 12614]
gi|118437786|gb|EAV44422.1| flp/fap pilin component [Stappia aggregata IAM 12614]
Length = 62
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 36/54 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++ F+ DESGATAIEYGL+A L+++ I+ +V G ++ +F I ++N +
Sbjct: 4 LINRFVNDESGATAIEYGLIAGLLSIVIVGAVAATGTSISGIFTKIQGEMNTAA 57
>gi|209551110|ref|YP_002283027.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536866|gb|ACI56801.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 55
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M I K FL D+ GATA+EYGL+A++I A+++ + G L VF I++ +
Sbjct: 1 MRIFKAFLADDVGATAVEYGLIAAIICTALVSGLGFFTGALQNVFNVINNNMT 53
>gi|39934951|ref|NP_947227.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|39648802|emb|CAE27323.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
Length = 63
Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F D GATAIEY ++A+ +++ I+ VTTLG L + +S L
Sbjct: 12 RLISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSDALK 63
>gi|168701154|ref|ZP_02733431.1| hypothetical protein GobsU_16634 [Gemmata obscuriglobus UQM 2246]
gi|168701155|ref|ZP_02733432.1| hypothetical protein GobsU_16639 [Gemmata obscuriglobus UQM 2246]
gi|168703133|ref|ZP_02735410.1| hypothetical protein GobsU_26621 [Gemmata obscuriglobus UQM 2246]
gi|168705822|ref|ZP_02738099.1| hypothetical protein GobsU_40192 [Gemmata obscuriglobus UQM 2246]
Length = 66
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ NFL+ E G TA+EY ++ +LI V IA++TTLG + F+ + S + P +
Sbjct: 6 KSLVNFLKAEDGPTAVEYAVMLALIVVVCIAAITTLGSNANSTFSFVGSSIKPPT 60
>gi|218530651|ref|YP_002421467.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
gi|218522954|gb|ACK83539.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
Length = 61
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+I K F+ DESGATAIEYGL+A+++ +A++ G L F+ I + LN ++
Sbjct: 3 NITKRFIADESGATAIEYGLVAAMMGIAVVTIFKAFGTSLGNAFSTIGTALNTQA 57
>gi|323529418|ref|YP_004231570.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323386420|gb|ADX58510.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ K F++DE G TAIEYGL+A+LIA+ II VT++G L A F I+SKL
Sbjct: 5 INTAKAFVRDEDGVTAIEYGLIATLIALVIITGVTSVGTNLAAKFVLIASKLQ 57
>gi|167841421|ref|ZP_02468105.1| hypothetical protein Bpse38_32405 [Burkholderia thailandensis
MSMB43]
Length = 48
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+L+DES +AIEY L+ASLIA+ II +V +G L +VF+ ++S +
Sbjct: 1 MCWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|218462815|ref|ZP_03502906.1| putative pilus component protein [Rhizobium etli Kim 5]
gi|218661044|ref|ZP_03516974.1| putative pilus component protein [Rhizobium etli IE4771]
Length = 55
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M ++K F D +GATA+EYGL+A+LI A+++ + G L VF+ +S+ +
Sbjct: 1 MRLLKAFFADGTGATAVEYGLIAALICTALVSGLGFFTGSLQNVFSLLSNNIT 53
>gi|307726370|ref|YP_003909583.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307586895|gb|ADN60292.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 57
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ K F++DE G TAIEYGL+A+LIA+ II VT +G L A F IS+KL
Sbjct: 5 INSTKAFIRDEDGVTAIEYGLIATLIALVIITGVTAVGTNLAAKFLFISTKL 56
>gi|227823968|ref|YP_002827941.1| probable PilA pilus assembly protein [Sinorhizobium fredii
NGR234]
gi|227342970|gb|ACP27188.1| probable PilA pilus assembly protein [Sinorhizobium fredii
NGR234]
Length = 60
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
I ++DESGATAIEYGL+A+LI+VA+I T LG L ++F +S ++
Sbjct: 4 IFARLMKDESGATAIEYGLIAALISVALITGATALGDSLDSMFNALSGQMTTA 56
>gi|187927691|ref|YP_001898178.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724581|gb|ACD25746.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 56
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ +L+D+ G T+IEY LL SLIA+ I+ SV LG + +++ I++ +
Sbjct: 8 RKWLRDDQGVTSIEYALLGSLIAIVILGSVVALGSGVKSLYEMIAAAI 55
>gi|94312583|ref|YP_585792.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93356435|gb|ABF10523.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
Length = 63
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
M+ F + + GATAIEYGL+A LIAVAI+A VT LG L F+++++K+
Sbjct: 1 MRQVKASLFRKAQRGATAIEYGLIAGLIAVAIVAGVTNLGQNLGTGFSNLATKVTT 56
>gi|239833240|ref|ZP_04681569.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301]
gi|239825507|gb|EEQ97075.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301]
Length = 107
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 34/54 (62%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++ F+++ +G+TAIEY L+ +L+++AII+ V + G + F + + + +
Sbjct: 52 LMTRFMKNRAGSTAIEYALIGTLVSIAIISGVALMAGSVGDKFNETARQFEQAT 105
>gi|163851900|ref|YP_001639943.1| Flp/Fap pilin component [Methylobacterium extorquens PA1]
gi|163663505|gb|ABY30872.1| Flp/Fap pilin component [Methylobacterium extorquens PA1]
Length = 65
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+I K F+ DESGATAIEYG++A++I +AI+ + LT F + + LN ++
Sbjct: 3 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLNTQT 57
>gi|240139023|ref|YP_002963498.1| Flp/Fap pilin component [Methylobacterium extorquens AM1]
gi|240008995|gb|ACS40221.1| Flp/Fap pilin component [Methylobacterium extorquens AM1]
Length = 69
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+I K F+ DESGATAIEYG++A++I +AI+ + LT F + + LN ++
Sbjct: 7 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLNTQT 61
>gi|121534393|ref|ZP_01666217.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1]
gi|121307163|gb|EAX48081.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1]
Length = 57
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 34/55 (61%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M ++K +L+ + G +EYGL+ +LIAV +I ++T +G L +F +++ +
Sbjct: 3 MWWEMIKTYLRCQKGQGMVEYGLILALIAVVVIGALTLMGTNLQGMFNNVAGNVK 57
>gi|148253065|ref|YP_001237650.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146405238|gb|ABQ33744.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 56
Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 31/49 (63%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ ESG TAIEYGLLA+LIAV II VT +G L A+F I KL
Sbjct: 7 IDSESGVTAIEYGLLAALIAVVIIVGVTLIGTNLQAIFNYIGGKLKVPG 55
>gi|85716621|ref|ZP_01047591.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
gi|85696622|gb|EAQ34510.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
Length = 59
Score = 51.4 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
FL DESGATAIEY L+AS I++ I+A+V +GG L F ++ L
Sbjct: 8 RFASKFLWDESGATAIEYALIASGISIVIVAAVIGIGGSLKDRFDGLNGLLK 59
>gi|167587320|ref|ZP_02379708.1| Flp/Fap pilin component [Burkholderia ubonensis Bu]
Length = 58
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++ FL++E G TAIEYGL+A LIAVAI+ SVT +G +L VF +I ++L +
Sbjct: 4 MMIRFLKEEDGVTAIEYGLIAGLIAVAIMTSVTDIGTRLGLVFTNIYNQLATAA 57
>gi|315497468|ref|YP_004086272.1| flp/fap pilin component [Asticcacaulis excentricus CB 48]
gi|315415480|gb|ADU12121.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48]
Length = 57
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
M IV+ FL D+SGATAIEY L+ASL+ +A ++ G +++ IS+KL P
Sbjct: 1 MQIVREFLSDKSGATAIEYALIASLVFLAASGAILAYGESFKNMYSFISAKLTPA 55
>gi|317122050|ref|YP_004102053.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885]
gi|315592030|gb|ADU51326.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885]
Length = 63
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
VK L+DE+G +EYGL+ +LIAV +I ++ L G L ++F+ ++ +LN
Sbjct: 11 VKFRLRDEAGQGMVEYGLIIALIAVVLIGALVALSGGLGSIFSRVTQQLN 60
>gi|303247319|ref|ZP_07333592.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
gi|302491233|gb|EFL51122.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
Length = 56
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 37/53 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ + NF+++E GATA+EYGL+A+LIA I+ VTTLG L+ F I++ +
Sbjct: 2 LRAITNFVRNEEGATAVEYGLMAALIAAVIVTVVTTLGQNLSTTFDSIATSIK 54
>gi|170696790|ref|ZP_02887899.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170138306|gb|EDT06525.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 55
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+FL+D G TA+EYGL+A LI V I ++V LG +L F I+ L
Sbjct: 3 KFTASFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTIAGLL 53
>gi|307726371|ref|YP_003909584.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307586896|gb|ADN60293.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 57
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ + F++DE G TAIEYGL+A+LIA+AII VT +G L A F I+ L
Sbjct: 5 IQSIDAFVRDEEGVTAIEYGLIATLIALAIITGVTAIGTNLEAKFMLIAGYLT 57
>gi|147677780|ref|YP_001211995.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum
thermopropionicum SI]
gi|146273877|dbj|BAF59626.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum
thermopropionicum SI]
Length = 59
Score = 51.1 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++K L++E+G EYGL+ +LIAV +IA++TTLG + + +K+
Sbjct: 4 LIKRLLREENGQGMAEYGLILALIAVVVIAALTTLGTNIKTKLETVGNKIGE 55
>gi|218508205|ref|ZP_03506083.1| putative pilus component protein [Rhizobium etli Brasil 5]
gi|327193400|gb|EGE60300.1| putative pilus component protein [Rhizobium etli CNPAF512]
Length = 55
Score = 51.1 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 35/53 (66%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M ++K F D +GATA+EYGL+A++I A+++ + G L VF+ +S+ +
Sbjct: 1 MRLLKAFFADGTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNIT 53
>gi|46201036|ref|ZP_00055934.2| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 57
Score = 51.1 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ +DE GATAIEYGL+A+LI+V I + LG KL+ +F IS K
Sbjct: 8 MITKMTRDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLFTTISGKF 57
>gi|254561618|ref|YP_003068713.1| Flp/Fap pilin component [Methylobacterium extorquens DM4]
gi|254268896|emb|CAX24857.1| Flp/Fap pilin component [Methylobacterium extorquens DM4]
Length = 68
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+I K F+ DESGATAIEYG++A++I +AI+ + LT FA + + LN ++
Sbjct: 7 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFATLGTGLNAQT 61
>gi|16263306|ref|NP_436099.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021]
gi|307304375|ref|ZP_07584126.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307318082|ref|ZP_07597518.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|14523985|gb|AAK65511.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021]
gi|306896123|gb|EFN26873.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306902577|gb|EFN33171.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 56
Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+++ F ++ESGATAIEYGL+A LI+V +I + T+G LT F I + L
Sbjct: 3 NLLARFARNESGATAIEYGLIAGLISVVLITVMGTIGTGLTTRFTAIGTALT 54
>gi|148553539|ref|YP_001261121.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148498729|gb|ABQ66983.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 61
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+ +D GATA+EYGL+ SLI +AI+ +V +LG + + + DI+ ++
Sbjct: 10 FRALARDCRGATAVEYGLILSLIFMAIMGAVASLGSSVQSRWNDIAERVTS 60
>gi|307943142|ref|ZP_07658487.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773938|gb|EFO33154.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 56
Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++ F +DESGATAIEYGL+A LIAV II +VTTLG L +F I++ L
Sbjct: 3 NVFARFAKDESGATAIEYGLIAGLIAVVIIGTVTTLGTTLNGIFETINTDLTT 55
>gi|146343301|ref|YP_001208349.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146196107|emb|CAL80134.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 53
Score = 50.7 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F +DESGATAIEYGL+ + IA+AII + LG L +F +++KLN
Sbjct: 1 MLLKFYEDESGATAIEYGLICAGIALAIITILNKLGLTLEGIFTTLTTKLN 51
>gi|326387192|ref|ZP_08208802.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326208373|gb|EGD59180.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 69
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
++ DESGATAIEYGL+A+LIA I ++ +LG L+ F+ +S+ +
Sbjct: 12 LLARIGNDESGATAIEYGLIAALIATGAIVAMGSLGNSLSNTFSLVSTDMGKA 64
>gi|75674502|ref|YP_316923.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
gi|74419372|gb|ABA03571.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
Length = 55
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++ FL+DESGATAIEYGL+A+ IAVAII +V TLG L F + L
Sbjct: 3 NLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFTKVEQDLKK 55
>gi|92116016|ref|YP_575745.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
gi|91798910|gb|ABE61285.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
Length = 56
Score = 50.3 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 39/54 (72%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
++VK F +DESGATAIEYGL+A+ IAVAII++V +G L + F +S +L
Sbjct: 3 NLVKRFAKDESGATAIEYGLIAAGIAVAIISAVNLVGTNLISKFTQVSDQLAKP 56
>gi|254420002|ref|ZP_05033726.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
gi|196186179|gb|EDX81155.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
Length = 56
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ F +DESGATAIEYGL+A+LIAV II + T+G +L +++ L
Sbjct: 3 KFISRFAKDESGATAIEYGLIAALIAVVIITVLGTIGTQLDIKLKEVAKGLGAA 56
>gi|167566929|ref|ZP_02359845.1| hypothetical protein BoklE_30496 [Burkholderia oklahomensis
EO147]
gi|167573998|ref|ZP_02366872.1| hypothetical protein BoklC_29450 [Burkholderia oklahomensis
C6786]
Length = 48
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++L+DES +AIEY L+ASLIA+ II +V +G L +VF+ ++S +
Sbjct: 1 MSWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|163758977|ref|ZP_02166063.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43]
gi|162283381|gb|EDQ33666.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43]
Length = 86
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 35/54 (64%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M+ + L D +GAT+IEYGL+A+++++A+ + V +G L+ F +++ L
Sbjct: 1 MRKKLCTRALADRAGATSIEYGLIAAVLSLALFSGVGVIGQSLSTSFERVAANL 54
>gi|167821370|ref|ZP_02453050.1| hypothetical protein Bpse9_39988 [Burkholderia pseudomallei 91]
gi|167899809|ref|ZP_02487210.1| hypothetical protein Bpse7_39160 [Burkholderia pseudomallei 7894]
gi|167924328|ref|ZP_02511419.1| hypothetical protein BpseBC_37578 [Burkholderia pseudomallei
BCC215]
gi|254187139|ref|ZP_04893654.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
gi|254296480|ref|ZP_04963936.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|157806473|gb|EDO83643.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|157934822|gb|EDO90492.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
Length = 48
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
L+DES +AIEY L+ASLIA+ II +V +G L +VF+ ++S +
Sbjct: 1 MRRLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|254488860|ref|ZP_05102065.1| Flp/Fap pilin component family [Roseobacter sp. GAI101]
gi|214045729|gb|EEB86367.1| Flp/Fap pilin component family [Roseobacter sp. GAI101]
Length = 67
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
V+ F +DE GATAIEYGL A+L+ I+ SV LG + F ++S L +
Sbjct: 12 VRTFCKDEDGATAIEYGLFAALVGAVIVGSVAGLGKQTDKGFTTMASALTAEG 64
>gi|254420564|ref|ZP_05034288.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
gi|196186741|gb|EDX81717.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
Length = 59
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFA----DISSKLN 55
FL D+ GATAIEYGL+ LI VAI+ + LG ++ I+ LN
Sbjct: 3 RFTARFLNDDRGATAIEYGLICGLIFVAILGGLNALGASNGGLYNQTMQKIADALN 58
>gi|148261013|ref|YP_001235140.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5]
gi|146402694|gb|ABQ31221.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5]
Length = 67
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
F +D G TA+EYGL+A+L+AV II + TTL G L IS+ L+ +
Sbjct: 16 FAKDNRGVTALEYGLIAALMAVVIIGAFTTLSGDLKGAIDGISNALSANT 65
>gi|323529417|ref|YP_004231569.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323386419|gb|ADX58509.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ F++DE G TAIEYGL+A+LIA+AI+ VT++G L A F I+ L
Sbjct: 5 NQTIGAFVRDEEGVTAIEYGLIATLIALAIVVGVTSIGTNLEAKFMAIAGYLT 57
>gi|16127178|ref|NP_421742.1| pilus subunit protein PilA [Caulobacter crescentus CB15]
gi|221235979|ref|YP_002518416.1| type IV pilin protein pilA [Caulobacter crescentus NA1000]
gi|7208422|gb|AAF40189.1|AF229646_1 PilA [Caulobacter crescentus CB15]
gi|13424576|gb|AAK24910.1| pilus subunit protein PilA [Caulobacter crescentus CB15]
gi|220965152|gb|ACL96508.1| type IV pilin protein pilA [Caulobacter crescentus NA1000]
Length = 59
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
V FL+DESGATAIEYGL+ +LIAV I+ +VTTLG L F + ++ +
Sbjct: 3 KFVTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTNLRTAFTKAGAAVSTAA 57
>gi|144898052|emb|CAM74916.1| hypothetical protein MGR_1741 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 59
Score = 50.3 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ +DE GATAIEYGL+A+L+A+ II + L G L +F +++ L
Sbjct: 8 MLTKLNRDERGATAIEYGLIAALVAIVIIGGLQALSGGLNTLFQTVATTLG 58
>gi|307730010|ref|YP_003907234.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307584545|gb|ADN57943.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 59
Score = 50.3 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+FL+D G TA+EYGL+A LI V I ++V LG +L F ++ L
Sbjct: 3 KFATSFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVAGLLPA 55
>gi|23016176|ref|ZP_00055935.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 57
Score = 50.3 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ +DE GATAIEYGL+A+LI+V I + LG KL+ +F IS +
Sbjct: 8 MIAKMARDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLFTTISGNM 57
>gi|219883043|ref|YP_002478207.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219862049|gb|ACL42390.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 70
Score = 50.3 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
K L ESGATA+EYGLL LIAV IIA++ LG +L +F ++ L
Sbjct: 16 KKRLSGESGATAVEYGLLVGLIAVGIIAALVILGPQLAGLFTSVTESL 63
>gi|187923641|ref|YP_001895283.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
gi|187714835|gb|ACD16059.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
Length = 59
Score = 50.3 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ FL D G TAIEYGL+A L+ + I +VT +G ++ V ++ K+ +
Sbjct: 3 KFAQRFLADNKGVTAIEYGLIAGLVVLVIATAVTNVGTNVSTVLQQVADKITAPA 57
>gi|149184276|ref|ZP_01862594.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21]
gi|148831596|gb|EDL50029.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21]
Length = 60
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ +K DE GATA+EYGL+ +LI V+I+ +V+T G ++ +SS ++
Sbjct: 2 VQFLKKLGHDERGATAVEYGLILALIFVSIMGAVSTFGETTIDMWNTVSSAVSAA 56
>gi|150377238|ref|YP_001313833.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
gi|150031785|gb|ABR63900.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 55
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+++ F ++ESGATAIEYGL+A LI+V IIA + T+G LT F I + L
Sbjct: 3 NLLVRFARNESGATAIEYGLIAGLISVVIIAVMATVGTGLTTRFTAIGTALT 54
>gi|304392390|ref|ZP_07374331.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295494|gb|EFL89853.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 53
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M +K F +DESGATAIEYGLLA+LI++ I ++TT+G L + L+
Sbjct: 1 MTNIKRFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGTALS 53
>gi|328545282|ref|YP_004305391.1| PilA2 pilus assembly protein [polymorphum gilvum SL003B-26A1]
gi|326415024|gb|ADZ72087.1| PilA2 pilus assembly protein [Polymorphum gilvum SL003B-26A1]
Length = 60
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ F +DESGATAIEYGL+A LI+V I+ +V T+G L++VF IS++L
Sbjct: 3 NLFARFAKDESGATAIEYGLIAGLISVVIVGTVVTIGTDLSSVFTKISTEL 53
>gi|187919321|ref|YP_001888352.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
gi|187717759|gb|ACD18982.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
Length = 58
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ +K FL++E G AIEY LLA LIAVAII +V + L A+F I + L +
Sbjct: 3 NTIKKFLREEDGVAAIEYALLAGLIAVAIIVTVQNMTTNLKAMFNAIGTALTNAA 57
>gi|91976437|ref|YP_569096.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91682893|gb|ABE39195.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 55
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M ++ F+ D SGATAIEY +LA I++ II V LG KL + + +SS +
Sbjct: 1 MLRRLISRFVSDTSGATAIEYAILAVGISIVIIGVVNGLGTKLNSSYDSVSSAIK 55
>gi|56477534|ref|YP_159123.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
gi|56313577|emb|CAI08222.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
Length = 66
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 38/55 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ ++K F++D+ G T+IEY LLA+LI AI+ SV+ LG + ++ D++ K++
Sbjct: 10 VELLKGFIEDQDGVTSIEYALLAALIFGAIVVSVSLLGSSVETLYGDVADKVSAA 64
>gi|115525746|ref|YP_782657.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
gi|115519693|gb|ABJ07677.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
Length = 81
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 42/54 (77%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+I+ FL+DESGATAIEYGL+A+ IA+AII +V T+G L+ F +IS++L K
Sbjct: 27 NILARFLKDESGATAIEYGLIAAGIALAIITAVNTVGTDLSTKFGEISTELTKK 80
>gi|313902399|ref|ZP_07835802.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965]
gi|313467330|gb|EFR62841.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965]
Length = 66
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
VK L+DE+G +EYGL+ +LIAV +I ++ + G L+A+F +S+ L +
Sbjct: 11 VKFRLRDEAGQGMVEYGLIIALIAVVLIGALVAMQGGLSAIFERVSTTLEKAA 63
>gi|27382252|ref|NP_773781.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
gi|27355423|dbj|BAC52406.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
Length = 78
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
MK ++V F++DESGATAIEYGL+A+ IA+AII V LG L F IS+ L
Sbjct: 25 MK-NLVARFVKDESGATAIEYGLIAAGIALAIITVVNNLGSTLNTKFTSISTSLK 78
>gi|239905276|ref|YP_002952015.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905277|ref|YP_002952016.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905278|ref|YP_002952017.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905279|ref|YP_002952018.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905280|ref|YP_002952019.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795140|dbj|BAH74129.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795141|dbj|BAH74130.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795142|dbj|BAH74131.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795143|dbj|BAH74132.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795144|dbj|BAH74133.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
Length = 55
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+ + F++DE GATA+EYGL+A+LIA II +VT++G LT F +++ L
Sbjct: 2 LTAITQFIRDEEGATAVEYGLMAALIAAVIITAVTSIGTNLTTTFNTVATSLGS 55
>gi|73542325|ref|YP_296845.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72119738|gb|AAZ62001.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 74
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 37/52 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++++ + L +++ T+IEY LL LIA+AI+ SV+++G + ++ I++K+
Sbjct: 22 LNLIADLLHEDAAVTSIEYALLGMLIAIAIVGSVSSVGDAVKTLYESIAAKM 73
>gi|329888706|ref|ZP_08267304.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
gi|328847262|gb|EGF96824.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
Length = 60
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ F +DE GATAIEYGL+ LI + IIA+V+ + TA++ IS+ ++
Sbjct: 4 FICRFHRDEGGATAIEYGLICGLIFLVIIAAVSAFAARSTAMYDYISTTISGA 56
>gi|294102195|ref|YP_003554053.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261]
gi|293617175|gb|ADE57329.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261]
Length = 53
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ ++N + DE G +EYGLL +LIAV +IA++ TLG K+ +F ++ KL
Sbjct: 2 LKRLRNLVTDEEGQGMVEYGLLLALIAVVVIAALLTLGPKVAGIFTEVEGKL 53
>gi|114705460|ref|ZP_01438368.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi
HTCC2506]
gi|114540245|gb|EAU43365.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi
HTCC2506]
Length = 62
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
FL++ESGATAIEY L+A +IAV +I + TLG + A F IS ++
Sbjct: 10 KTFARFLKNESGATAIEYALIAGMIAVGLITILGTLGSNMVAGFTKISDEV 60
>gi|21673265|ref|NP_661330.1| hypothetical protein CT0426 [Chlorobium tepidum TLS]
gi|21646353|gb|AAM71672.1| hypothetical protein CT0426 [Chlorobium tepidum TLS]
Length = 69
Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++ + G T IEY L+ASLIAVA+IA + T+G L VF+ + S L
Sbjct: 23 VKSQKGVTMIEYALIASLIAVAVIAVLLTVGSNLKTVFSYVGSNLTT 69
>gi|323700356|ref|ZP_08112268.1| Flp/Fap pilin component [Desulfovibrio sp. ND132]
gi|323460288|gb|EGB16153.1| Flp/Fap pilin component [Desulfovibrio desulfuricans ND132]
Length = 60
Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 39/56 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
M + N ++DE GATAIEYGL+A+LIA I+A+ + LG ++ + F I+ +++ +
Sbjct: 1 MTKLMNLIRDEEGATAIEYGLIAALIAAGIVAATSALGDQVVSTFDYITGQMSAAT 56
>gi|146338126|ref|YP_001203174.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146190932|emb|CAL74937.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 46
Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++DESGATAIEYGL+A+ I++AIIA+V LG L++ F I+S L
Sbjct: 1 MKDESGATAIEYGLIAAGISLAIIAAVNGLGSSLSSKFGSINSSLK 46
>gi|325108086|ref|YP_004269154.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
gi|324968354|gb|ADY59132.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
Length = 57
Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
VK+F++ E G TA+EY ++ +LI V + +V +G F + L+
Sbjct: 8 VKHFIECEDGPTAVEYAVMLALIVVVCLTAVRAIGTNANTQFESVRDALS 57
>gi|21673264|ref|NP_661329.1| hypothetical protein CT0425 [Chlorobium tepidum TLS]
gi|21646352|gb|AAM71671.1| hypothetical protein CT0425 [Chlorobium tepidum TLS]
Length = 69
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++ + G T IEY L+ASLIAVA+IA + T+G L VF+ + S L
Sbjct: 23 VKSQKGVTMIEYALIASLIAVAVIAVLLTVGSNLQTVFSYVGSNLTT 69
>gi|296134301|ref|YP_003641548.1| Flp/Fap pilin component [Thermincola sp. JR]
gi|296032879|gb|ADG83647.1| Flp/Fap pilin component [Thermincola potens JR]
Length = 54
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ ++K ++ESG EYGL+ +LI +A+IA + T+GG L F ++S+ L
Sbjct: 2 LTMIKKLWKEESGQGMTEYGLILALIVIAVIAIMATMGGNLKNKFENVSNALK 54
>gi|91977982|ref|YP_570641.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91684438|gb|ABE40740.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 78
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/55 (58%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
MK +I+ F++DESGATAIEYGL+A+ IA+AIIA+V LG L A F +SS+L
Sbjct: 25 MK-NILARFVKDESGATAIEYGLIAAGIALAIIAAVNGLGTALNARFGSVSSQLK 78
>gi|304392387|ref|ZP_07374328.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295491|gb|EFL89850.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 53
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M +K F +DESGATAIEYGLLA+LI++ I ++TT+G L S L
Sbjct: 1 MTNLKKFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGSALT 53
>gi|113866748|ref|YP_725237.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
gi|113525524|emb|CAJ91869.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
Length = 57
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
K+FL+D+ G ++IEY LL SLIA+AI+ SV TL + A++ I+S++
Sbjct: 9 KDFLRDDWGVSSIEYALLGSLIAMAIVVSVATLSNAVKAMYELIASRM 56
>gi|312139252|ref|YP_004006588.1| flp/fap pilin component [Rhodococcus equi 103S]
gi|311888591|emb|CBH47903.1| putative Flp/Fap pilin component [Rhodococcus equi 103S]
Length = 68
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFA 48
M + + +D+ GATA+EYGL+ + IA+ II +V G K+T +F
Sbjct: 11 MGLDVKDRLTRDDRGATAVEYGLMVAGIAMVIIVAVFAFGDKITDLFD 58
>gi|146342539|ref|YP_001207587.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146195345|emb|CAL79370.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 53
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/53 (58%), Positives = 39/53 (73%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M ++ FL+DESGATAIEYGL+A+ I++AIIASV LG KL F I+S L
Sbjct: 1 MSVILRFLKDESGATAIEYGLIAAGISIAIIASVNGLGSKLNTKFTSINSSLK 53
>gi|86159253|ref|YP_466038.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775764|gb|ABC82601.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C]
Length = 59
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 28/52 (53%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ +K +DE TA+EY ++ ++I + II LG + F + ++++
Sbjct: 2 LQTLKRLWKDEEAPTAVEYAIMVAVIGLVIIVGAQILGTNVNTTFNNAANRV 53
>gi|323525742|ref|YP_004227895.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323382744|gb|ADX54835.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+FL+D G TA+EYGL+A LI V I ++V LG +L F +++ L
Sbjct: 3 KFAASFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVAALLPA 55
>gi|325673443|ref|ZP_08153134.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC
33707]
gi|325555464|gb|EGD25135.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC
33707]
Length = 67
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFAD 49
M + + +D+ GATA+EYGL+ + IA+ II +V GG+L+ +F +
Sbjct: 11 MGLDVKDRLTRDDRGATAVEYGLMVAGIAMVIIIAVFAFGGRLSTLFQN 59
>gi|13472987|ref|NP_104554.1| PilA-like protein [Mesorhizobium loti MAFF303099]
gi|14023735|dbj|BAB50340.1| PilA [Mesorhizobium loti MAFF303099]
Length = 59
Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 38/50 (76%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ FL+DE+GATA+EYGL+ +++++ I+A ++ + +T +F+D S+L
Sbjct: 4 VLLRFLKDETGATAVEYGLIVAVLSLTIVAGISQVFNSITWLFSDNGSRL 53
>gi|192290480|ref|YP_001991085.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|192284229|gb|ACF00610.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 54
Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F D GATAIEY ++A+ +++ I+ VTTLG L + +S +
Sbjct: 3 RLISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSEAMK 54
>gi|329847250|ref|ZP_08262278.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
gi|328842313|gb|EGF91882.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
Length = 56
Score = 48.4 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSK 53
+++ F+ DE GATAIEYGL+A L+ + ++ ++T G T ++ I
Sbjct: 1 MLRRFIADERGATAIEYGLVAGLLFLGVVGAITAYGDAFTTMYEGIRDS 49
>gi|153009816|ref|YP_001371031.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
gi|151561704|gb|ABS15202.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
Length = 59
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++ F + ESGATAIEYGL+A+LIAV II + T+LG + F I++ +
Sbjct: 3 KLIARFRKSESGATAIEYGLIAALIAVVIIGATTSLGTTIRTQFTAIATAIGGAG 57
>gi|15966374|ref|NP_386727.1| hypothetical protein SMc02446 [Sinorhizobium meliloti 1021]
gi|307313039|ref|ZP_07592666.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307321045|ref|ZP_07600451.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|15075645|emb|CAC47200.1| Putative pilus assembly protein [Sinorhizobium meliloti 1021]
gi|306893320|gb|EFN24100.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306899358|gb|EFN29992.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 57
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
M ++ L+D GATA+EYGLLA+LI+V ++ + G L + +++ +
Sbjct: 1 METLRRLLRDHDGATAVEYGLLAALISVGLLIGLQNFSGALLGMLTFVTNTIEAA 55
>gi|154250686|ref|YP_001411510.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154154636|gb|ABS61853.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 54
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+K+F+++ESGATAIEYGL+A+ IAV II +V ++G L F I++ +N
Sbjct: 3 QFLKSFVKNESGATAIEYGLIAAGIAVVIIVAVDSVGAALITQFTAIATAIN 54
>gi|328952518|ref|YP_004369852.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328452842|gb|AEB08671.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 65
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 37/53 (69%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
++ + +DE+GATAIEYGL+ ++A +I ++ T KL ++F+ I++KL+
Sbjct: 4 LLISLWRDEAGATAIEYGLIVGIMAATLITALGTFSEKLESLFSAINTKLSEA 56
>gi|149173516|ref|ZP_01852146.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797]
gi|148847698|gb|EDL62031.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797]
Length = 57
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M +K FL +E G TA+EY ++ + I + IA++ +G + +F + ++++
Sbjct: 1 MQYLKRFLIEEDGPTAVEYAVMLAAIVMVCIAAIAAIGTRTNDLFENATTEMQ 53
>gi|92116959|ref|YP_576688.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
gi|91799853|gb|ABE62228.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
Length = 54
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ +FL+DESGATAIEY L+A+ I++ I+ +VT +G + F + L
Sbjct: 3 KLTSDFLRDESGATAIEYALIATGISILIVVAVTGIGSSVNGRFTAVGDLLK 54
>gi|319795777|ref|YP_004157417.1| flp/fap pilin component [Variovorax paradoxus EPS]
gi|315598240|gb|ADU39306.1| Flp/Fap pilin component [Variovorax paradoxus EPS]
Length = 61
Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV---TTLGGKLTAVFADISSKLNPKS 58
+ F++DE GATAIEYG++A ++AV ++A TL G + VF IS+ L+ +
Sbjct: 5 ITRFIRDEEGATAIEYGIIAGMMAVLLVAVFSPSGTLYGAIEGVFGRISTALDTVT 60
>gi|89899598|ref|YP_522069.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
gi|89344335|gb|ABD68538.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
Length = 72
Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+L DESG TA+EYGLLA+LIAV II +++ G LT ++ S +
Sbjct: 18 QSFAEWLIDESGVTAMEYGLLAALIAVTIIGAISATGTSLTTIYDYWSETVIAA 71
>gi|94309596|ref|YP_582806.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353448|gb|ABF07537.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ F +D G T+IEY LL +LIA+ II +V+ LG L A++ +++++
Sbjct: 7 MCDTFRRDTRGVTSIEYALLGALIAMVIIGAVSLLGTNLKALYDMVAAEV 56
>gi|283779849|ref|YP_003370604.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283438302|gb|ADB16744.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 62
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
V+ FL E G TA+EY ++ +LI + + ++ +G A F +++KL+
Sbjct: 8 VQRFLVSEDGPTAVEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKLSSGG 60
>gi|225174965|ref|ZP_03728962.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225169605|gb|EEG78402.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 57
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 32/54 (59%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+++ +++E G EYGL+ +A+A+I +T +G L +F++I+ +L
Sbjct: 3 NLMMRLVREEKGQGLAEYGLILVFVALAVIVGLTAVGTNLNTLFSNIAGRLVAP 56
>gi|219848813|ref|YP_002463246.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485]
gi|219543072|gb|ACL24810.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485]
Length = 52
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++++F E G +EY L+ LIAV +I ++T LG ++ +F+ ++ + P
Sbjct: 1 MLRSFFAKEEGQGLVEYALILVLIAVVVIGALTALGTNISGLFSQLADTIQP 52
>gi|222524696|ref|YP_002569167.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl]
gi|222448575|gb|ACM52841.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl]
Length = 52
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++++F E G +EY L+ LIAV +I ++T LG ++ +F +++ + P
Sbjct: 1 MLRSFFAKEEGQGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTIQP 52
>gi|115361029|ref|YP_778166.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115286357|gb|ABI91832.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 68
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ + ++ DE G TAIEY LLA++ A ++ SV TL G L ++ I+S +
Sbjct: 5 VRADAISRWIDDEQGVTAIEYALLAAMFATVVLGSVVTLKGSLQDMYDMIASVVT 59
>gi|167566928|ref|ZP_02359844.1| putative pilus subunit protein [Burkholderia oklahomensis EO147]
gi|167573997|ref|ZP_02366871.1| putative pilus subunit protein [Burkholderia oklahomensis C6786]
Length = 56
Score = 47.6 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ VK F++DE G +AIEYGL+A+LIA+ II SV T+G L +VF+ I + L
Sbjct: 5 VQYVKQFVRDEGGVSAIEYGLIAALIAIVIIGSVKTVGTNLNSVFSTIGNDL 56
>gi|315121898|ref|YP_004062387.1| hypothetical protein CKC_00740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495300|gb|ADR51899.1| hypothetical protein CKC_00740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 35
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAI 32
MK++I++ FLQDESGATAIEYGLLA+LI I
Sbjct: 1 MKVNIIRKFLQDESGATAIEYGLLAALIIFCI 32
>gi|197118223|ref|YP_002138650.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
gi|197087583|gb|ACH38854.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
Length = 63
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+++ LQD+ GAT +EYGL+ +LIA + V ++G + + F I L P
Sbjct: 11 MRSKLQDQKGATMVEYGLMLALIAAVCVTVVGSIGTQAESTFQTIVDALTPA 62
>gi|94497282|ref|ZP_01303853.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58]
gi|94423145|gb|EAT08175.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58]
Length = 54
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M V+ L++E GATAIEYGL+A+LIAVA I ++T+LGG L F +S L+
Sbjct: 1 MQFVRKMLKNEKGATAIEYGLIAALIAVAAIGAMTSLGGNLKNTFNSVSDNLD 53
>gi|118588530|ref|ZP_01545939.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614]
gi|118439236|gb|EAV45868.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614]
Length = 75
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKL-TAVFADISSKLN 55
K F++DE GAT IEYGL+ I++ I+ ++T +G + +F IS+ L
Sbjct: 20 KEFVRDERGATMIEYGLIVGFISIIILITMTAIGTTMRDDIFGKISTTLQ 69
>gi|283769327|ref|ZP_06342226.1| Flp/Fap pilin component [Bulleidia extructa W1219]
gi|283103984|gb|EFC05368.1| Flp/Fap pilin component [Bulleidia extructa W1219]
Length = 56
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ + F ++ESG +EYGL+ +LIAV +I ++ + G + F I++ L
Sbjct: 3 NFMNWFTEEESGQGMVEYGLIIALIAVVLIVALQAMQGGIANTFQAITNALQRP 56
>gi|239817409|ref|YP_002946319.1| Flp/Fap pilin component [Variovorax paradoxus S110]
gi|239803986|gb|ACS21053.1| Flp/Fap pilin component [Variovorax paradoxus S110]
Length = 60
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASV---TTLGGKLTAVFADISSKL 54
+ + FL+DE GATAIEYG++A L+A+ ++A+ T +G LT +F I+ KL
Sbjct: 2 LRSITRFLRDEEGATAIEYGIIAGLMAIVLVAAFSKTTGIGLALTNMFTAIAGKL 56
>gi|326404413|ref|YP_004284495.1| putative pilin subunit protein [Acidiphilium multivorum AIU301]
gi|325051275|dbj|BAJ81613.1| putative pilin subunit protein [Acidiphilium multivorum AIU301]
Length = 63
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
F +D G TA+EYGL+A+L+AV IIA+ LG L V ++++KL
Sbjct: 16 FAKDNRGVTAMEYGLIAALMAVVIIAAFGILGNGLGNVMTELNNKL 61
>gi|323702110|ref|ZP_08113778.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574]
gi|323532992|gb|EGB22863.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574]
Length = 54
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
I+ N L+DE+G EYGL+ +LIA I + TLG + D++ +L
Sbjct: 3 EIIMNLLRDENGQGMAEYGLILALIAAVCIVAFKTLGSSINTKMGDVNQQLQ 54
>gi|114797894|ref|YP_761847.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444]
gi|114738068|gb|ABI76193.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444]
Length = 59
Score = 46.8 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ +DE GATAIEYGL+A L+ +AII VT ++ + L
Sbjct: 7 LMLRLARDERGATAIEYGLIAGLMVLAIIGGVTAFADANNEIYQTVEDNL 56
>gi|304320644|ref|YP_003854287.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis
HTCC2503]
gi|303299546|gb|ADM09145.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis
HTCC2503]
Length = 60
Score = 46.8 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 41/52 (78%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ F++DE GATAIEYGL+A+LIAVAII++V++LG ++ F D+++ L
Sbjct: 2 NNLFNRFVKDEDGATAIEYGLIAALIAVAIISAVSSLGTRIQGAFDDVNTTL 53
>gi|148258232|ref|YP_001242817.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146410405|gb|ABQ38911.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 54
Score = 46.8 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 33/40 (82%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKL 43
+++ F++DESGATAIEYGL+A+ I++AIIA+V LG L
Sbjct: 3 NLLARFVKDESGATAIEYGLIAAGISLAIIAAVNGLGTSL 42
>gi|283778146|ref|YP_003368901.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283436599|gb|ADB15041.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 58
Score = 46.8 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
M + NFL++E G TA+EY ++ ++I + IA V +G D +KLN
Sbjct: 1 MQWISNFLREEDGPTAVEYAVMLAMIIMVCIAGVVLIGQAANDSITDSGNKLNTA 55
>gi|167584953|ref|ZP_02377341.1| hypothetical protein BuboB_06431 [Burkholderia ubonensis Bu]
Length = 60
Score = 46.8 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 38/56 (67%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ V ++ D+ G TAIEY LLASLIA+AI+ +V TLG L V+ D+++++ +
Sbjct: 5 IKAVARWIDDKGGVTAIEYALLASLIAMAIVVAVATLGTTLDGVYMDVATRITAAT 60
>gi|163846875|ref|YP_001634919.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl]
gi|163668164|gb|ABY34530.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl]
Length = 55
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++++F E G +EY L+ LIAV +I ++T LG ++ +F +++ + P
Sbjct: 4 MLRSFFAKEEGQGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTIQP 55
>gi|194288841|ref|YP_002004748.1| flp pilin component [Cupriavidus taiwanensis LMG 19424]
gi|193222676|emb|CAQ68679.1| Flp pilin component [Cupriavidus taiwanensis LMG 19424]
Length = 61
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ + FL+DE G TAIEYGL+A+LIA+ II SV T+G +L +VF+ I S L
Sbjct: 7 MFQQFLRDEDGVTAIEYGLIAALIAIVIIVSVQTVGTQLNSVFSKIGSYLTSA 59
>gi|304392389|ref|ZP_07374330.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295493|gb|EFL89852.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 51
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ FL+DESGATAIEYGLLA+LI++ I ++TT+G L + L
Sbjct: 1 MFMKFLKDESGATAIEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGTALT 51
>gi|85373828|ref|YP_457890.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594]
gi|84786911|gb|ABC63093.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594]
Length = 66
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 37/49 (75%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
++ + LQDE+GATA+EYGL+ +L+ +A++A+V +G + A++ +SS
Sbjct: 7 KLITSLLQDEAGATAVEYGLILALVFLAMVAAVQGVGNETVAMWDHVSS 55
>gi|75675346|ref|YP_317767.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
gi|74420216|gb|ABA04415.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
Length = 57
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
L D SGATAIEY L+AS I++ I+A+V+ +GG L F ++ L
Sbjct: 6 KFASELLWDTSGATAIEYALIASGISIVIVAAVSGIGGSLRDRFDALNGLLK 57
>gi|296158790|ref|ZP_06841619.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
gi|295890995|gb|EFG70784.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
Length = 57
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ FL++ G TAIEYGL+A L+ + I +VT++G ++ V +++ + S
Sbjct: 3 KFTQRFLKENKGVTAIEYGLIAGLVVIVIAGAVTSVGANISTVMTKVANLIVAPS 57
>gi|303241716|ref|ZP_07328213.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|303241717|ref|ZP_07328214.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|302590717|gb|EFL60468.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|302590718|gb|EFL60469.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
Length = 60
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 1 MKMHI--VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
MKM+ +K + ++ G +EYGL+ SLIAVA IA++ LG K+ +F +++ +
Sbjct: 2 MKMYFDYLKALVGNKKGQGMVEYGLIISLIAVACIAALVVLGPKIATLFNGVANSITAP 60
>gi|116878541|ref|YP_842255.1| hypothetical protein Pcar_3315 [Pelobacter carbinolicus DSM 2380]
gi|114843177|gb|ABI81934.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 59
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 32/51 (62%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSK 53
M +++ + E GAT+ EY ++ +LI + IA+++ LG K+ F D++ +
Sbjct: 5 MSKLRDLVWKEEGATSPEYAVMLALIIIVCIAAISYLGKKVNNTFNDMAQQ 55
>gi|296283731|ref|ZP_06861729.1| hypothetical protein CbatJ_08919 [Citromicrobium bathyomarinum
JL354]
Length = 57
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
M + + D+ GATAIEYGL+A+LIAVA I ++ +LG +L+ F +S+ + PK+
Sbjct: 1 MKFFRELMNDDQGATAIEYGLIAALIAVAAITAMGSLGNQLSNTFTTVSTDMAPKA 56
>gi|296121140|ref|YP_003628918.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
gi|296013480|gb|ADG66719.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
Length = 57
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M V FL+ E G TA+EY ++ ++I + +I V+ G + I S L
Sbjct: 1 MESVIRFLRSEDGPTAVEYAVMLAMILLVVITGVSAFGNAQANYWGGIQSDL 52
>gi|325964119|ref|YP_004242025.1| Flp pilus assembly protein, pilin Flp [Arthrobacter
phenanthrenivorans Sphe3]
gi|323470206|gb|ADX73891.1| Flp pilus assembly protein, pilin Flp [Arthrobacter
phenanthrenivorans Sphe3]
Length = 63
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+KN L +E GATA+EYG++ LIAV II +V LG L +F ++ +
Sbjct: 15 LKNRLSNEKGATAVEYGIMVGLIAVVIIVAVQLLGTTLDGMFDKVNVTI 63
>gi|220927008|ref|YP_002502310.1| hypothetical protein Mnod_7268 [Methylobacterium nodulans ORS
2060]
gi|219951615|gb|ACL62007.1| conserved hypothetical protein [Methylobacterium nodulans ORS
2060]
Length = 66
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 33/54 (61%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ V+ FL D +G+TAIEY ++A LI +A+ S+ G +++ + +K+
Sbjct: 6 LRARSVRRFLNDGAGSTAIEYAMIAGLIFLAVAVSLNLYGASTGSLYTSLGNKV 59
>gi|194335911|ref|YP_002017705.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1]
gi|194308388|gb|ACF43088.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1]
Length = 81
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ + G T IEY L+A LI+VA IA+VT +G L VF IS L+
Sbjct: 34 IRSQKGVTMIEYALIAGLISVATIAAVTLIGTSLNEVFEKISDALD 79
>gi|283779850|ref|YP_003370605.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283438303|gb|ADB16745.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 62
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 30/53 (56%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ FL+ E G TA+EY ++ +LI + + ++ +G A F +++KL+
Sbjct: 8 IGRFLKSEDGPTAVEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKLSSGG 60
>gi|78060318|ref|YP_366893.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964868|gb|ABB06249.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 68
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFA 48
M +V+ ++ DE G T+IEY LL ++ AVA++ +V TL G L V+
Sbjct: 4 TMRVVRRWISDEQGVTSIEYALLGAMFAVAVLGTVVTLKGSLADVYE 50
>gi|296282443|ref|ZP_06860441.1| hypothetical protein CbatJ_02425 [Citromicrobium bathyomarinum
JL354]
Length = 82
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 33/52 (63%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M I ++ L+DE+G +AIEY ++ +LI V ++ ++ LG + +++ + L
Sbjct: 1 MMITRHLLRDETGTSAIEYAVIMALIGVGLVGALNALGTETANSYSNAAVAL 52
>gi|302381311|ref|YP_003817134.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302191939|gb|ADK99510.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 57
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
M +++ FL DE GATAIEYG++ I + I+A T K+ +F S + +
Sbjct: 1 MSLIRRFLSDERGATAIEYGMIVGAIFLVIVAGATAFSDKVIVMFNRASEAMTAAA 56
>gi|149179075|ref|ZP_01857647.1| hypothetical protein PM8797T_30414 [Planctomyces maris DSM 8797]
gi|148842066|gb|EDL56457.1| hypothetical protein PM8797T_30414 [Planctomyces maris DSM 8797]
Length = 57
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+KNFL E G TA+EY ++ +LI + + ++ +G A F + L
Sbjct: 6 KSIKNFLVSEDGPTAVEYAVMLALIVIVCLTAIQAVGTNANAKFEAVRDALT 57
>gi|53723202|ref|YP_112187.1| pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76818517|ref|YP_336463.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|126444256|ref|YP_001064071.1| putative pilus subunit protein [Burkholderia pseudomallei 668]
gi|126456774|ref|YP_001076983.1| putative pilus subunit protein [Burkholderia pseudomallei 1106a]
gi|134281902|ref|ZP_01768609.1| putative pilus subunit protein [Burkholderia pseudomallei 305]
gi|167725240|ref|ZP_02408476.1| putative pilus subunit protein [Burkholderia pseudomallei DM98]
gi|167744170|ref|ZP_02416944.1| putative pilus subunit protein [Burkholderia pseudomallei 14]
gi|167821369|ref|ZP_02453049.1| putative pilus subunit protein [Burkholderia pseudomallei 91]
gi|167829708|ref|ZP_02461179.1| putative pilus subunit protein [Burkholderia pseudomallei 9]
gi|167851177|ref|ZP_02476685.1| putative pilus subunit protein [Burkholderia pseudomallei B7210]
gi|167899808|ref|ZP_02487209.1| putative pilus subunit protein [Burkholderia pseudomallei 7894]
gi|167908124|ref|ZP_02495329.1| putative pilus subunit protein [Burkholderia pseudomallei NCTC
13177]
gi|167916471|ref|ZP_02503562.1| putative pilus subunit protein [Burkholderia pseudomallei 112]
gi|167924327|ref|ZP_02511418.1| putative pilus subunit protein [Burkholderia pseudomallei BCC215]
gi|217424250|ref|ZP_03455749.1| putative pilus subunit protein [Burkholderia pseudomallei 576]
gi|226194052|ref|ZP_03789653.1| putative pilus subunit protein [Burkholderia pseudomallei
Pakistan 9]
gi|237509208|ref|ZP_04521923.1| putative pilin [Burkholderia pseudomallei MSHR346]
gi|242312447|ref|ZP_04811464.1| putative pilus subunit protein [Burkholderia pseudomallei 1106b]
gi|254182589|ref|ZP_04889183.1| putative pilus subunit protein [Burkholderia pseudomallei 1655]
gi|254187140|ref|ZP_04893655.1| putative pilus subunit protein [Burkholderia pseudomallei Pasteur
52237]
gi|254192539|ref|ZP_04898978.1| putative pilus subunit protein [Burkholderia pseudomallei S13]
gi|254262622|ref|ZP_04953487.1| putative pilus subunit protein [Burkholderia pseudomallei 1710a]
gi|254296479|ref|ZP_04963935.1| putative pilus subunit protein [Burkholderia pseudomallei 406e]
gi|52213616|emb|CAH39670.1| putative pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76582990|gb|ABA52464.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|126223747|gb|ABN87252.1| putative pilus subunit protein [Burkholderia pseudomallei 668]
gi|126230542|gb|ABN93955.1| putative pilus subunit protein [Burkholderia pseudomallei 1106a]
gi|134246964|gb|EBA47051.1| putative pilus subunit protein [Burkholderia pseudomallei 305]
gi|157806367|gb|EDO83537.1| putative pilus subunit protein [Burkholderia pseudomallei 406e]
gi|157934823|gb|EDO90493.1| putative pilus subunit protein [Burkholderia pseudomallei Pasteur
52237]
gi|169649297|gb|EDS81990.1| putative pilus subunit protein [Burkholderia pseudomallei S13]
gi|184213124|gb|EDU10167.1| putative pilus subunit protein [Burkholderia pseudomallei 1655]
gi|217392715|gb|EEC32738.1| putative pilus subunit protein [Burkholderia pseudomallei 576]
gi|225933997|gb|EEH29983.1| putative pilus subunit protein [Burkholderia pseudomallei
Pakistan 9]
gi|235001413|gb|EEP50837.1| putative pilin [Burkholderia pseudomallei MSHR346]
gi|242135686|gb|EES22089.1| putative pilus subunit protein [Burkholderia pseudomallei 1106b]
gi|254213624|gb|EET03009.1| putative pilus subunit protein [Burkholderia pseudomallei 1710a]
Length = 56
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ VK F++DE G +AIEYGL+A+LIA+ II +V T+G L +VF+ I + L
Sbjct: 5 VQYVKQFVRDEGGVSAIEYGLIAALIAIVIIGAVKTVGTNLNSVFSTIGNDL 56
>gi|296283732|ref|ZP_06861730.1| hypothetical protein CbatJ_08924 [Citromicrobium bathyomarinum
JL354]
Length = 62
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
+DE GATA+EYGL+ +L+ +A++ ++ T + + + +
Sbjct: 2 NRFWYRLTRDERGATAVEYGLILALVFLAMVGAIGTFSDGVIGTWDTVRT 51
>gi|307943137|ref|ZP_07658482.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773933|gb|EFO33149.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 59
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 35/52 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+++ L+DE+G T+IEY L+ L+++ +I +VT +G L ++F + S L+
Sbjct: 3 NLLVRLLKDEAGTTSIEYALIGVLLSIIMIGAVTMMGTSLNSMFEGVESGLS 54
>gi|332798620|ref|YP_004460119.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1]
gi|332696355|gb|AEE90812.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1]
Length = 60
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 32/55 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ + F +ESG +EYGL+ +L+AV +I ++ + L ++F +++ L +
Sbjct: 3 NFLNWFTSEESGQGMVEYGLIIALVAVILIVALQGMTDGLESIFGEVTDALEESA 57
>gi|90423304|ref|YP_531674.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90105318|gb|ABD87355.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 54
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 34/51 (66%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ FL D SGAT++EY L+A+ +++ I+ +V T+G +TA + + S +
Sbjct: 3 RLLCKFLGDRSGATSLEYALIAAGLSIVILGAVQTIGTAVTAKYTSVGSAI 53
>gi|304393805|ref|ZP_07375730.1| phosphoribosyl-AMP cyclohydrolase [Ahrensia sp. R2A130]
gi|303294004|gb|EFL88379.1| phosphoribosyl-AMP cyclohydrolase [Ahrensia sp. R2A130]
Length = 65
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 27/58 (46%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+K K F DE GATAIEYGL A +IA+A I ++ G L S
Sbjct: 2 LKRGFTKRFAGDERGATAIEYGLAAGMIALAAIGGMSAAGEGTKRPLNCAGETLQASS 59
>gi|260467147|ref|ZP_05813325.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259029071|gb|EEW30369.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 59
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ FL DE+GATA+EY L+ ++++ II ++ + +T +F+D S+L
Sbjct: 4 VLLRFLTDETGATAVEYALIVCVLSLTIIGGISQVFNSITWLFSDNGSRL 53
>gi|170701159|ref|ZP_02892132.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133940|gb|EDT02295.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 68
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ ++ DE G T+IEY L+A++ A ++ASV TL L ++ I+S +
Sbjct: 10 ILRWIDDEQGVTSIEYALIAAMFATVVLASVVTLKDSLEDMYNMIASVVT 59
>gi|218530763|ref|YP_002421579.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
gi|218523066|gb|ACK83651.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
Length = 56
Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADI 50
+ F + ESGATAIEYGL ++ I +A+I + G L + F I
Sbjct: 3 RSLVRFARHESGATAIEYGLASTFIGIAVIGAFRAYGTALGSFFPKI 49
>gi|299131747|ref|ZP_07024942.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
gi|298591884|gb|EFI52084.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
Length = 53
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M +K F D+SGAT+IEY ++A+ +++ I+ +V +G L + I + +
Sbjct: 1 MKTLKRFFLDQSGATSIEYAIIAAGLSIVILVAVNGIGSALNGKYEMIRAAVQ 53
>gi|150397710|ref|YP_001328177.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419]
gi|150029225|gb|ABR61342.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 57
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
M +K +D GAT +EYGLLA+LI+V ++ + L + I+ L
Sbjct: 1 METLKRLFEDRDGATVVEYGLLAALISVGLLIGLQNFSSALLDMLTFITGTLEAA 55
>gi|87312297|ref|ZP_01094395.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645]
gi|87285001|gb|EAQ76937.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645]
Length = 67
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
++NFL E G TA+EY ++ +LI + + ++ +G + A F I + ++
Sbjct: 8 IQNFLVSEDGPTAVEYAVMLALIVIVCLTAIQAIGTQANATFTKIGNDMSTA 59
>gi|319785611|ref|YP_004145087.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171499|gb|ADV15037.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 60
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+++ F++DESGATAIEYGL+A+LIA+AII TLG L A F +I S LN
Sbjct: 3 NLIARFVKDESGATAIEYGLIAALIALAIITGAGTLGNALNAKFTNIGSTLN 54
>gi|304322119|ref|YP_003855762.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis
HTCC2503]
gi|303301021|gb|ADM10620.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis
HTCC2503]
Length = 54
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTT-LGGKLTAVFADISSKLNPKS 58
+K FL DE GATA+EYGL+ ++IAVA++ +V G +L F D +S + +
Sbjct: 1 MKWFLSDEEGATAMEYGLIVAIIAVALVVAVQGETGTRLQKAFNDAASGFDGTT 54
>gi|197123321|ref|YP_002135272.1| Flp/Fap pilin component [Anaeromyxobacter sp. K]
gi|196173170|gb|ACG74143.1| Flp/Fap pilin component [Anaeromyxobacter sp. K]
Length = 59
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ +K +DE TA+EY ++ ++I + II LG + F + +S++
Sbjct: 2 LQTLKRLWKDEEAPTAVEYAIMVAVIGLVIIIGAAALGTNVNTTFGNAASRV 53
>gi|13475419|ref|NP_106983.1| pilin subunit [Mesorhizobium loti MAFF303099]
gi|14026171|dbj|BAB52769.1| pilin subunit [Mesorhizobium loti MAFF303099]
Length = 87
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
M + + F DE+GA +EY +L +I VA+IA+V +G ++ + ++S L +
Sbjct: 31 MTMTRQFRDDENGAAMVEYTVLLGIITVAVIATVVLVGTWVSGRWTALNSALTTAT 86
>gi|146339727|ref|YP_001204775.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146192533|emb|CAL76538.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 54
Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 36/52 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ +FL+ ++GAT+IEY ++A +++ I+A+V LG L++ F I+S +
Sbjct: 3 QLIASFLRHQAGATSIEYAIIAGGLSIVILAAVNGLGSGLSSKFTSINSSIK 54
>gi|218673962|ref|ZP_03523631.1| putative pilus component protein [Rhizobium etli GR56]
Length = 62
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M ++K FL D +GATA+EYGL+A++I A+++ + G + ++ L
Sbjct: 1 MRLLKAFLADGTGATAVEYGLIAAVICTALVSGLGLFSGSCQKRLSVSATIL 52
>gi|316934953|ref|YP_004109935.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
gi|315602667|gb|ADU45202.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
Length = 54
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ F D GAT+IEY L+A I++ I+ TLG L A ++ + L
Sbjct: 3 RLISRFRTDTRGATSIEYALIAVGISIVIVGLSATLGTNLAAKYSAVKDAL 53
>gi|322436081|ref|YP_004218293.1| hypothetical protein AciX9_2480 [Acidobacterium sp. MP5ACTX9]
gi|321163808|gb|ADW69513.1| hypothetical protein AciX9_2480 [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ L+DE+G IEY L+A LI + + S K+ F I ++L
Sbjct: 6 QFLNELLRDETGQDLIEYALVAGLIGLGAVVSFGGFENKVRGAFNSIGNQLT 57
>gi|156741109|ref|YP_001431238.1| Flp/Fap pilin component [Roseiflexus castenholzii DSM 13941]
gi|156232437|gb|ABU57220.1| Flp/Fap pilin component [Roseiflexus castenholzii DSM 13941]
Length = 52
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+V++F E G +EY L+ LIA+ +I +T LG +++ VF+ I+S L+
Sbjct: 1 MVRSFFAKEEGQGLVEYALILVLIAIVVIGILTLLGNRVSQVFSQINSGLS 51
>gi|258405296|ref|YP_003198038.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
gi|257797523|gb|ACV68460.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
Length = 56
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
M + NF + E GATA+EYGL+ +LIA+ IIA+VT LG L +F ++++K++
Sbjct: 1 MDKLMNFFRAEEGATAVEYGLMVALIAIVIIAAVTFLGNSLNNIFNEVANKVDSAG 56
>gi|320101689|ref|YP_004177280.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644]
gi|319748971|gb|ADV60731.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644]
Length = 62
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+ +FL+ E G TA+EY ++ +LI V IA++TTLG F +
Sbjct: 7 IVDFLKAEDGPTAVEYAVMVALIIVVCIAAITTLGQSANETFTIAGDAVQA 57
>gi|91976668|ref|YP_569327.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91683124|gb|ABE39426.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 56
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F D GAT+IEY ++A I + I++ V LG + A++ ++++ L
Sbjct: 6 LLSRFFADRRGATSIEYAIIAGGICLVIVSVVNGLGVQTGAMYTNVANSLQ 56
>gi|172065269|ref|YP_001815981.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171997511|gb|ACB68428.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 68
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
V ++ D+ G T+IEY L+ +LIA ++ASV TLGG L + I+S +
Sbjct: 10 VLRWIGDDQGVTSIEYALIGALIATLVMASVMTLGGSLDDTYNMIASVVT 59
>gi|296121064|ref|YP_003628842.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
gi|296013404|gb|ADG66643.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
Length = 57
Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++ VK FL E G TA+EY ++ +LI + + +V +G A F +++ L
Sbjct: 4 INSVKKFLVSEDGPTAVEYAVMLALIVIVCLTAVQAIGTNAAAKFQNVADTLAT 57
>gi|145219386|ref|YP_001130095.1| Flp/Fap pilin component [Prosthecochloris vibrioformis DSM 265]
gi|145205550|gb|ABP36593.1| Flp/Fap pilin component [Chlorobium phaeovibrioides DSM 265]
Length = 74
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++ + GAT IEY L+A L++VA+I +VT +G + VF +I+ L
Sbjct: 23 VKSQKGATMIEYALIAGLVSVAVIGAVTLIGTDVNLVFGEITDALET 69
>gi|91783007|ref|YP_558213.1| putative pilus subunit protein, PilA like [Burkholderia
xenovorans LB400]
gi|91686961|gb|ABE30161.1| Putative pilus subunit protein, PilA like protein [Burkholderia
xenovorans LB400]
Length = 55
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 33/53 (62%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+ FL++ G TAIEYGL+A L+ + I +V+++G ++AV ++S +
Sbjct: 3 KFTQRFLKENKGVTAIEYGLIAGLVVLVIAGAVSSVGSNISAVMTKVASLITT 55
>gi|13474657|ref|NP_106226.1| fimbriae associated protein [Mesorhizobium loti MAFF303099]
gi|14025412|dbj|BAB52012.1| fimbriae associated protein [Mesorhizobium loti MAFF303099]
Length = 58
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++ F++DESGATAIEYGL+A+LIA+AII LG + + F +I + LN
Sbjct: 3 NLFARFVKDESGATAIEYGLIAALIALAIITGAGALGNAINSKFTNIGTTLNSSG 57
>gi|224824208|ref|ZP_03697316.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
gi|224603627|gb|EEG09802.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
Length = 64
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
I+ + D+ G T+IEY LL SLIAV I++SV LG LTA+FA++++++
Sbjct: 7 ILTSLFNDDEGVTSIEYALLGSLIAVVILSSVLGLGTNLTALFANVATQI 56
>gi|294012382|ref|YP_003545842.1| putative pilin Flp [Sphingobium japonicum UT26S]
gi|292675712|dbj|BAI97230.1| putative pilin Flp [Sphingobium japonicum UT26S]
Length = 61
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 33/53 (62%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
K + + GATA+EYGL+ +LI +AI+ +++ + K ++ ++++++
Sbjct: 6 KNFSFWKLIYCQRGATAVEYGLILALICLAIVGALSNVANKTIGMWNNVATEV 58
>gi|311743547|ref|ZP_07717353.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
gi|311312677|gb|EFQ82588.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
Length = 90
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 11 QDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+++ GATA+EY L+ + IAV ++ +V G L F + +++
Sbjct: 45 REDKGATAVEYALIVAGIAVGLLVAVQAFGTALATFFTGLGAQIG 89
>gi|225182001|ref|ZP_03735433.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225167286|gb|EEG76105.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 59
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 31/55 (56%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+V+ F +ESG EY L+ +L+++ I ++ +GG++ +F I+ + +
Sbjct: 3 EMVRRFFTEESGQGMTEYALILALVSIVAIGALFAMGGRIEEIFEQITGSFSGEG 57
>gi|90425193|ref|YP_533563.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90107207|gb|ABD89244.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 53
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+IV FL+DESGATAIEYGL+A+ IA+AII +V T+G L+A F I SKL
Sbjct: 3 NIVARFLKDESGATAIEYGLIAAGIALAIITAVNTVGSNLSAKFTSIGSKL 53
>gi|220922530|ref|YP_002497832.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947137|gb|ACL57529.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M+ + FL+DE GA +EY +L ++ VA+IA++ +G + + ++S L
Sbjct: 1 MNRLSKFLRDEDGAALVEYTVLLGILLVAVIATIGGVGTWINGKWTALNSAL 52
>gi|170744075|ref|YP_001772730.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46]
gi|168198349|gb|ACA20296.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46]
Length = 66
Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 35/54 (64%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ V+ FL D SG+TAIEY ++A I +A++ ++ G + ++A+ SS++
Sbjct: 6 LRAKTVRLFLCDSSGSTAIEYVMIAGFIFLALVGGLSLYGNQTGNLYANFSSQV 59
>gi|326387726|ref|ZP_08209332.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207772|gb|EGD58583.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 63
Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 38/57 (66%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
K+ I++ D GATAIEYGL+A+L+AVA I+++ LG L+ F +++ ++ +
Sbjct: 3 KVRILRQLRDDRRGATAIEYGLIAALVAVAAISAMGALGNGLSNTFQAVANDMSNST 59
>gi|83717167|ref|YP_440451.1| PilA-like protein [Burkholderia thailandensis E264]
gi|167579108|ref|ZP_02371982.1| PilA-related protein [Burkholderia thailandensis TXDOH]
gi|167617223|ref|ZP_02385854.1| PilA-related protein [Burkholderia thailandensis Bt4]
gi|257141098|ref|ZP_05589360.1| PilA-related protein [Burkholderia thailandensis E264]
gi|83650992|gb|ABC35056.1| PilA-related protein [Burkholderia thailandensis E264]
Length = 56
Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ VK F+++E G +AIEYGL+A+LIA+ II +V T+G L +VF+ I S L
Sbjct: 5 VQYVKQFVREEGGVSAIEYGLIAALIAIVIIGAVKTVGTNLNSVFSTIGSDL 56
>gi|86750604|ref|YP_487100.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
gi|86573632|gb|ABD08189.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
Length = 54
Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F SGATAIEY L+A+ +++ I+ +V LG KL + +++ L
Sbjct: 3 RLISRFTCGTSGATAIEYALIAAGLSIVILVTVNGLGSKLNTSYTSVNTALK 54
>gi|307293402|ref|ZP_07573248.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
gi|306881468|gb|EFN12684.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
Length = 53
Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 38/53 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M ++ L++E GATAIEYGL+A+LIAVA I +++T+G L F ++++ L
Sbjct: 1 MQFIRKMLKNEKGATAIEYGLIAALIAVAAIGAMSTIGTNLKGTFNNVATNLK 53
>gi|119717345|ref|YP_924310.1| Flp/Fap pilin component [Nocardioides sp. JS614]
gi|119538006|gb|ABL82623.1| Flp/Fap pilin component [Nocardioides sp. JS614]
Length = 67
Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 12 DESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
DE GA+A+EYGLL IA I+ V LG ++ +F D + + K+
Sbjct: 17 DERGASAVEYGLLIGGIAAVIVVLVFALGDQVKELFTDTCTSVEAKT 63
>gi|170720036|ref|YP_001747724.1| Flp/Fap pilin component [Pseudomonas putida W619]
gi|169758039|gb|ACA71355.1| Flp/Fap pilin component [Pseudomonas putida W619]
Length = 59
Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
K FL + GA+ IEY ++A+++AV + V + G ++ +F I + LN
Sbjct: 11 KQFLHRKDGASGIEYAVIAAMVAVILAGFVPGISGNISTMFTAIQTALN 59
>gi|326386385|ref|ZP_08208008.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326209046|gb|EGD59840.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 60
Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
M ++ L+DE+GATAIEYGL+A+LIAVA I ++ LG L+ F+ +S +
Sbjct: 1 MKLINRILKDEAGATAIEYGLIAALIAVAAITAMGALGNSLSNTFSLVSGDMTKA 55
>gi|319781330|ref|YP_004140806.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167218|gb|ADV10756.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 61
Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 36/50 (72%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ FL DE+GATA+EYG++ +++++AI+ + + + +F+D +SKL
Sbjct: 4 VLLGFLNDETGATAVEYGVIIAVLSLAIVGGIGEVRDGIIWLFSDNNSKL 53
>gi|327540757|gb|EGF27324.1| Flp/Fap pilin component [Rhodopirellula baltica WH47]
Length = 59
Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
V FL++E G TA+EY +L +LI V I +VTT+G A F + + +
Sbjct: 8 VVAFLKEEDGPTAVEYAVLLALIIVVCIGAVTTIGSNANAKFGEAGAAIAA 58
>gi|302185187|ref|ZP_07261860.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae 642]
Length = 68
Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 33/53 (62%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+++F +D+ A+AIEY ++ +++A+ + A VT LG + F DI + L +
Sbjct: 14 IQSFFKDKEAASAIEYAVIVAMVALVLFAFVTPLGDAIKGKFNDIVTGLGGTT 66
>gi|168703134|ref|ZP_02735411.1| hypothetical protein GobsU_26626 [Gemmata obscuriglobus UQM 2246]
Length = 65
Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 33/46 (71%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADIS 51
V FL+ E G TA+EY ++ +LI V ++A+++ +GG +A++ D+S
Sbjct: 9 VVEFLKGEDGPTAVEYAVMLALIIVVLVAAISNIGGTTSAMYNDLS 54
>gi|115523899|ref|YP_780810.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
gi|115517846|gb|ABJ05830.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
Length = 54
Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 32/52 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F+ DE+ AT++EY L+A+ I++ I+ +V +G +T + I + +
Sbjct: 3 RLLSRFVADETAATSLEYALIAAGISITIVGAVQVIGTSVTERYTAIGTAIK 54
>gi|85859142|ref|YP_461344.1| flp/Fap pilin component [Syntrophus aciditrophicus SB]
gi|85722233|gb|ABC77176.1| flp/fap pilin component [Syntrophus aciditrophicus SB]
Length = 54
Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAV-FADISSKL 54
FL+ E GATAIEY L+A LI +AI++SV+ LG + V + I+
Sbjct: 7 FLKSEDGATAIEYALIAGLIFLAIVSSVSFLGQSVKTVLYDKIADAF 53
>gi|107028252|ref|YP_625347.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116687163|ref|YP_840410.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|105897416|gb|ABF80374.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116652878|gb|ABK13517.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
Length = 68
Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADI 50
M + + ++ DE G T+IEY LLAS+ AVA++ SV TL G L + I
Sbjct: 5 MRVARGWIADEQGVTSIEYALLASMFAVAVLGSVVTLKGSLGDAYEMI 52
>gi|197295149|ref|YP_002153690.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944628|emb|CAR57232.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 72
Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADI 50
M + + ++ DE G T+IEY LLAS+ A+A++ SV TL G L A + I
Sbjct: 5 MRVARCWIADERGVTSIEYALLASMFAIAVLGSVVTLKGSLGAAYEMI 52
>gi|114797760|ref|YP_761694.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444]
gi|114737934|gb|ABI76059.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444]
Length = 57
Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+ FL+DESGATAIEYGL+A+LIAVAII V+ LG ++ F +I +
Sbjct: 1 MFARFLKDESGATAIEYGLIAALIAVAIIGGVSALGTQVDTTFDEIEKGIRT 52
>gi|322434112|ref|YP_004216324.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
gi|321161839|gb|ADW67544.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ + L+DESG IEY L+A+LI + + ++ K+ F + S L
Sbjct: 7 LLSDLLEDESGQDLIEYALVAALIGLGAVVAMNGFSTKVKTAFNSVGSSLT 57
>gi|51891533|ref|YP_074224.1| pilus subunit protein [Symbiobacterium thermophilum IAM 14863]
gi|51855222|dbj|BAD39380.1| pilus subunit protein [Symbiobacterium thermophilum IAM 14863]
Length = 63
Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ + + G EYGL+ +LIAV +I ++T L L F ++++LN
Sbjct: 8 FRRLVVRQEGQGMTEYGLIIALIAVVLITTLTGLNKTLDKTFNKVTTQLN 57
>gi|220922529|ref|YP_002497831.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947136|gb|ACL57528.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M+ + FL+DE GA +EY +L ++ VA+IA++ +G + + ++S L
Sbjct: 1 MNRLSKFLRDEDGAALVEYTVLLGILLVAVIATIGGVGTWVNGKWTALNSALK 53
>gi|300021851|ref|YP_003754462.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
gi|299523672|gb|ADJ22141.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
Length = 58
Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
M V+ F DE+GAT+IEY L+AS++++AI+ ++ + G L +VF + + +
Sbjct: 1 MLPSSVREFAADENGATSIEYALIASIVSIAIVGALMGVKGSLVSVFESVVAGFSS 56
>gi|218893399|ref|YP_002442268.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58]
gi|218773627|emb|CAW29441.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58]
Length = 70
Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV----TTLGGKLTAVFADISSKLN 55
++ FL DE GA AIEY ++A LIAVA+IA + + + G L A F + +K+
Sbjct: 12 LRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVG 65
>gi|322434110|ref|YP_004216322.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9]
gi|321161837|gb|ADW67542.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ LQDESG IEY L+A LI + + ++T L GK+ + F + S L
Sbjct: 7 FFFDLLQDESGQDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSVGSSLT 57
>gi|87199922|ref|YP_497179.1| Flp/Fap pilin component [Novosphingobium aromaticivorans DSM
12444]
gi|87135603|gb|ABD26345.1| Flp/Fap pilin component [Novosphingobium aromaticivorans DSM
12444]
Length = 59
Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 41/56 (73%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
M + +N L + GATAIEYGL+A+L+AVA I ++++LG L+ F ++S++++ S
Sbjct: 1 MKLFRNLLANNEGATAIEYGLIAALVAVAAIGAMSSLGTSLSTTFNNVSTEMDNAS 56
>gi|220913387|ref|YP_002488696.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860265|gb|ACL40607.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 71
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ ++F + E GATA EYG+L + +A A++ V+ G L + D++S L
Sbjct: 13 LRTFRHFNRSEKGATATEYGILVAFLAFALVLGVSAFGQALNLHYQDMTSDLRTA 67
>gi|66047616|ref|YP_237457.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a]
gi|63258323|gb|AAY39419.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a]
gi|330969409|gb|EGH69475.1| Flp/Fap pilin component [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 68
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 33/53 (62%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+++F +D+ A+AIEY ++ +++A+ + A VT LG + F DI + L +
Sbjct: 14 IQSFFKDKEAASAIEYAVIVAMVALVLFAFVTPLGDAIKGKFNDIVTGLGGTT 66
>gi|296391005|ref|ZP_06880480.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAb1]
gi|313106825|ref|ZP_07793037.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016]
gi|310879539|gb|EFQ38133.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016]
Length = 70
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV----TTLGGKLTAVFADISSKLN 55
V+ FL DE GA AIEY ++A LIAVA+IA + + + G L A F + +K+
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVG 65
>gi|294012383|ref|YP_003545843.1| putative pilin Flp [Sphingobium japonicum UT26S]
gi|292675713|dbj|BAI97231.1| putative pilin Flp [Sphingobium japonicum UT26S]
Length = 53
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 39/53 (73%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M ++ +++E GATAIEYGL+A+LIAVA I ++++LGGKL F ++S L
Sbjct: 1 MQFIRKMMKNEKGATAIEYGLIAALIAVAAIGAMSSLGGKLGNTFNNVSGNLK 53
>gi|170734872|ref|YP_001773986.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|169820910|gb|ACA95491.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 68
Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADI 50
M + + ++ DE G T+IEY LLAS+ AVA++ SV TL G L + I
Sbjct: 5 MRVARGWIVDEQGVTSIEYALLASMFAVAVLGSVVTLKGSLGDAYEMI 52
>gi|297618084|ref|YP_003703243.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680]
gi|297145921|gb|ADI02678.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680]
Length = 53
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ +VK L +E G EYGL+ +L+A+A+I + +GG + F ++ L
Sbjct: 2 LSLVKRLLVEEEGQGMAEYGLILALVAIAVITVLGLMGGSIKDKFQEVIDAL 53
>gi|197117448|ref|YP_002137875.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
gi|197086808|gb|ACH38079.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
Length = 64
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 30/50 (60%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
K L++ +G +EY L+ L+++ +IA++ LG + VF ++S +L
Sbjct: 13 KQVLKNTNGQGLVEYALILVLMSIVVIAALKNLGDETNKVFCNVSDRLES 62
>gi|170749895|ref|YP_001756155.1| Flp/Fap pilin component [Methylobacterium radiotolerans JCM 2831]
gi|170656417|gb|ACB25472.1| Flp/Fap pilin component [Methylobacterium radiotolerans JCM 2831]
Length = 54
Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ F DESGATAIEYG++A+LIAVAII ++ T+G LT+ F+ IS LN
Sbjct: 4 LFTRFASDESGATAIEYGMIAALIAVAIITALKTVGTSLTSKFSQISGNLN 54
>gi|238027566|ref|YP_002911797.1| Flp/Fap pilin component [Burkholderia glumae BGR1]
gi|237876760|gb|ACR29093.1| Flp/Fap pilin component [Burkholderia glumae BGR1]
Length = 65
Score = 43.4 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ FL++E G TA+EYGL+A L+AVA++A+V L G ++ F+ I+ KL
Sbjct: 4 LINRFLKEEDGVTAVEYGLIAGLMAVALVAAVGVLSGGISNAFSYIAGKLT 54
>gi|162147488|ref|YP_001601949.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
gi|209545595|ref|YP_002277824.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
gi|161786065|emb|CAP55647.1| putative Flp/Fap pilin component [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533272|gb|ACI53209.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
Length = 56
Score = 43.4 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 11 QDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
G TA+EYGL+A+LIA I+ +V T+G KL VF+ I + L
Sbjct: 13 NSRRGVTALEYGLIAALIAAVIMTAVGTIGSKLNTVFSSIGTDL 56
>gi|152985381|ref|YP_001350209.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7]
gi|150960539|gb|ABR82564.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7]
Length = 72
Score = 43.4 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV----TTLGGKLTAVFADISSKLN 55
+ FL DE GA AIEY ++A LIAVA+IA + + + G L A F + K+
Sbjct: 12 FRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVG 65
>gi|116052340|ref|YP_792651.1| hypothetical protein PA14_55940 [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115587561|gb|ABJ13576.1| putative pilus assembly protein [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 70
Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV----TTLGGKLTAVFADISSKLN 55
V+ FL DE GA AIEY ++A LIAVA+IA + + + G L A F + +K+
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVG 65
>gi|85373827|ref|YP_457889.1| hypothetical protein ELI_05000 [Erythrobacter litoralis HTCC2594]
gi|84786910|gb|ABC63092.1| hypothetical protein ELI_05000 [Erythrobacter litoralis HTCC2594]
Length = 54
Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M N ++DE GATAIEYGL+A+LIAVA I ++ LG +L+ F+ +S+ ++
Sbjct: 1 MKFFNNLMKDEQGATAIEYGLIAALIAVAAIVAMQGLGNQLSNTFSSVSTTMS 53
>gi|326387837|ref|ZP_08209443.1| hypothetical protein Y88_0751 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207883|gb|EGD58694.1| hypothetical protein Y88_0751 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 60
Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
M +K+ +DE+GATAIEYGL+A+LIAVA I ++ LG L+ F+ +S +
Sbjct: 1 MQFIKSVFRDETGATAIEYGLIAALIAVAAITAMGALGNSLSNTFSLVSGDMATA 55
>gi|116748926|ref|YP_845613.1| Flp/Fap pilin component [Syntrophobacter fumaroxidans MPOB]
gi|116697990|gb|ABK17178.1| Flp/Fap pilin component [Syntrophobacter fumaroxidans MPOB]
Length = 57
Score = 43.0 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 40/52 (76%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M FL+DE G TAIEYGL+A+LIAVAII +VT++G LTAVF ++++L
Sbjct: 1 MKKFIKFLKDEEGVTAIEYGLIAALIAVAIIVAVTSVGTNLTAVFNRVAAEL 52
>gi|85708397|ref|ZP_01039463.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1]
gi|85689931|gb|EAQ29934.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1]
Length = 61
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 1 MKM-HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
MK+ + +K+ D SGATA+EYGL+ SLI VA+IA++ + + +++D+S
Sbjct: 1 MKLTNFLKHIGNDNSGATAVEYGLIVSLIVVAMIAALNGVANETIKMWSDVSD 53
>gi|322434101|ref|YP_004216313.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
gi|321161828|gb|ADW67533.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 42.6 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+++ L DESG IEY L+A LI + + ++T L GK+ + F + S L
Sbjct: 6 NVIAALLNDESGQDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSVGSSLT 57
>gi|260461952|ref|ZP_05810197.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259032199|gb|EEW33465.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 58
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++ F++DESGATAIEYGL+A+LIA+AII LG + A F I + LN
Sbjct: 3 NLFARFVKDESGATAIEYGLIAALIALAIITGAGALGNAINAKFTTIGTTLNSSG 57
>gi|316933042|ref|YP_004108024.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
gi|315600756|gb|ADU43291.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
Length = 55
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+IV F++DESGATAIEYGL+A+ IA+AIIA+V +GG+L+ F I +L
Sbjct: 3 NIVARFIKDESGATAIEYGLIAAGIALAIIAAVQGVGGQLSTNFTKIKDEL 53
>gi|119962026|ref|YP_948616.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1]
gi|119948885|gb|ABM07796.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1]
Length = 65
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
F +E GATA+EYGLL +LIA I+ +V LG + F + L
Sbjct: 18 RFTNEEKGATAVEYGLLVALIAALIVGTVVLLGQDVLKGFDTVEKAL 64
>gi|78186673|ref|YP_374716.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273]
gi|78166575|gb|ABB23673.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273]
Length = 60
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ + G T IEY L+A+L+AV +I ++ +G LT +F IS L+ +
Sbjct: 8 ITSQKGVTMIEYALIAALVAVVVITALGLVGENLTTIFTTISDALSGAA 56
>gi|153833206|ref|ZP_01985873.1| conserved domain protein [Vibrio harveyi HY01]
gi|148870477|gb|EDL69392.1| conserved domain protein [Vibrio harveyi HY01]
Length = 68
Score = 42.6 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG--GKLTAVFADISSKLNPKS 58
+ F DE G TAIEYGL+A +AV + +V + G GKL F ++ ++ S
Sbjct: 12 FLSKFKNDERGVTAIEYGLIAVAMAVLVTTAVGSDGFIGKLEGAFDQVAGAIDTAS 67
>gi|116671466|ref|YP_832399.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
gi|116611575|gb|ABK04299.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
Length = 64
Score = 42.6 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+E GATA+EYGL+ +LI +A I +T +G L +F DIS KL
Sbjct: 18 RLTGEEKGATAVEYGLMVALIVIAAILGITAVGTSLQTLFNDISLKL 64
>gi|27376553|ref|NP_768082.1| pilus assembly protein pilin subunit [Bradyrhizobium japonicum
USDA 110]
gi|27349694|dbj|BAC46707.1| pilus assembly protein pilin subunit [Bradyrhizobium japonicum
USDA 110]
Length = 54
Score = 42.6 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+++ F +DESGATAIEYGL+A+ IA+AII V LG L F IS+ L
Sbjct: 3 NLIARFAKDESGATAIEYGLIAAGIALAIITVVNNLGSTLNTKFTSISTSLK 54
>gi|330816678|ref|YP_004360383.1| Putative fimbriae assembly related protein [Burkholderia gladioli
BSR3]
gi|327369071|gb|AEA60427.1| Putative fimbriae assembly related protein [Burkholderia gladioli
BSR3]
Length = 56
Score = 42.2 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
K FL DE+G TA+EYGL+ + A T L + ++F+ ++S N
Sbjct: 6 KRFLADETGVTAVEYGLIGGFVVGAAALGATALSNSVESLFSFVTSFFN 54
>gi|153006809|ref|YP_001381134.1| Flp/Fap pilin component [Anaeromyxobacter sp. Fw109-5]
gi|152030382|gb|ABS28150.1| Flp/Fap pilin component [Anaeromyxobacter sp. Fw109-5]
Length = 58
Score = 42.2 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++ +DE G TA+EYG++ +LIAV IIA+V LG L+ F D+++++ P +
Sbjct: 3 QMLMKLWKDEEGPTAVEYGVMVALIAVVIIAAVILLGQNLSTTFNDVATQILPAA 57
>gi|77456878|ref|YP_346383.1| Flp/Fap pilin component [Pseudomonas fluorescens Pf0-1]
gi|77380881|gb|ABA72394.1| putative Flp/Fap pilin component [Pseudomonas fluorescens Pf0-1]
Length = 81
Score = 42.2 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ K ++D GA+ IEY ++A ++AVA+ A VT + +T +F I + L
Sbjct: 29 QITFYKGLVKDTEGASGIEYAIIAGMVAVALAAFVTPISTAITTMFNTIQAAL 81
>gi|229588197|ref|YP_002870316.1| hypothetical protein PFLU0649 [Pseudomonas fluorescens SBW25]
gi|229360063|emb|CAY46917.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 63
Score = 42.2 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 32/48 (66%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
F Q + GA+ IEY ++ +++A+ I+ + + LG K+ ++F +++K+
Sbjct: 16 FFQRKEGASGIEYAIIVAMVALVIVGAGSGLGTKIKSIFDSVATKMTT 63
>gi|194366093|ref|YP_002028703.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3]
gi|194348897|gb|ACF52020.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3]
Length = 63
Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIA-SVTTLGGKLTAVFADIS 51
++ FL++E G TA+EYGLLA++IA +IA T + +F +++
Sbjct: 5 IRRFLKEEDGVTALEYGLLAAVIAGVLIALGSTQIKDFFETLFENLT 51
>gi|220918099|ref|YP_002493403.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955953|gb|ACL66337.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
Length = 66
Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+++ +D+ GATA+EYGL+ + IA I+ V +LGG++ F + + +
Sbjct: 9 MLRKLWKDDEGATAVEYGLMVAAIAAVIVVVVFSLGGRVNTAFQTVDTTIGS 60
>gi|220913379|ref|YP_002488688.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860257|gb|ACL40599.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 66
Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++N + E GATA EY LL + IA+ IIA VT G L+A F+ + S +
Sbjct: 15 LRNRMDSEKGATATEYSLLVAFIALLIIAGVTLFGNALSAWFSTLGSTVGA 65
>gi|260462609|ref|ZP_05810815.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259031515|gb|EEW32785.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 64
Score = 42.2 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
M + + F DE+GA +EY +L +I VA+IA+V +G ++ + ++S L S
Sbjct: 5 MTMTRQFRDDENGAAMVEYTVLLGIITVAVIATVALVGTWVSGKWVTLNSTLTTSS 60
>gi|16125085|ref|NP_419649.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15]
gi|221233812|ref|YP_002516248.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000]
gi|13422083|gb|AAK22817.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15]
gi|220962984|gb|ACL94340.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000]
Length = 57
Score = 42.2 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+ F +D+SGATA+E G++ LI++A+I ++T L + F + +
Sbjct: 5 RPLSAFWRDQSGATAVEVGVIVVLISIALIGAITVLSDGIKTAFTKSADAMGS 57
>gi|332185280|ref|ZP_08387029.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332015004|gb|EGI57060.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 64
Score = 41.8 bits (97), Expect = 0.027, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 1 MKM-----HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
MKM +V+ D GATA+EY L+ + I + I A+++ +G + V + + +L
Sbjct: 1 MKMPWPLFKLVRAIGTDRRGATAVEYALIIACIMLVIFATLSQVGVNVAGVLSHLGDQLK 60
Query: 56 PKS 58
+
Sbjct: 61 SAT 63
>gi|91788406|ref|YP_549358.1| Flp/Fap pilin component [Polaromonas sp. JS666]
gi|91697631|gb|ABE44460.1| Flp/Fap pilin component [Polaromonas sp. JS666]
Length = 67
Score = 41.8 bits (97), Expect = 0.027, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M+ ++ F++ E G TAIEYGL+A+LIA+ IIA+VT +G +L VF +++ L
Sbjct: 9 MNFIQKFMRKEDGVTAIEYGLIAALIAIVIIAAVTIVGTQLCIVFNSVATALG 61
>gi|15599502|ref|NP_252996.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1]
gi|9950529|gb|AAG07694.1|AE004847_1 Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1]
Length = 72
Score = 41.8 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV----TTLGGKLTAVFADISSKLN 55
V+ FL DE GA AIEY ++A LIAVA+IA + + + G L A F + K+
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVG 65
>gi|254239024|ref|ZP_04932347.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719]
gi|254244883|ref|ZP_04938205.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192]
gi|126170955|gb|EAZ56466.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719]
gi|126198261|gb|EAZ62324.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192]
Length = 72
Score = 41.8 bits (97), Expect = 0.029, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV----TTLGGKLTAVFADISSKLN 55
++ FL DE GA AIEY ++A LIAVA+IA + + + G L A F + K+
Sbjct: 12 LRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVG 65
>gi|49082500|gb|AAT50650.1| PA4306 [synthetic construct]
Length = 73
Score = 41.8 bits (97), Expect = 0.029, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV----TTLGGKLTAVFADISSKLN 55
V+ FL DE GA AIEY ++A LIAVA+IA + + + G L A F + K+
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVG 65
>gi|320103318|ref|YP_004178909.1| hypothetical protein Isop_1777 [Isosphaera pallida ATCC 43644]
gi|319750600|gb|ADV62360.1| hypothetical protein Isop_1777 [Isosphaera pallida ATCC 43644]
Length = 77
Score = 41.8 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ E AT+IEY ++ LI +A+I S+ T GG V+ D L+
Sbjct: 7 FRRLHHQEEAATSIEYAVMLLLILLAVIGSIQTFGGSNNGVWGDNVQTLD 56
>gi|107028253|ref|YP_625348.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116686246|ref|YP_839493.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170734873|ref|YP_001773987.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105897417|gb|ABF80375.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116651961|gb|ABK12600.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169820911|gb|ACA95492.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 63
Score = 41.8 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ V F++DE G TAIEYGL+A+LIA+ IIA+++T+G L VF I+ L+
Sbjct: 5 IQQVGRFVRDEDGVTAIEYGLIAALIAIGIIAALSTVGKDLKTVFTTIADDLDSA 59
>gi|326387727|ref|ZP_08209333.1| hypothetical protein Y88_0641 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207773|gb|EGD58584.1| hypothetical protein Y88_0641 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 61
Score = 41.8 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
M ++++ L+D GATA+EYG+L + ++ II T +L ++ + +
Sbjct: 1 MTMLRHILRDTQGATAVEYGILVGIFSIGIIFGFTEFTNQLYNLWLIVGENTDAA 55
>gi|319782175|ref|YP_004141651.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317168063|gb|ADV11601.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 72
Score = 41.8 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
M + + F DE+GA +EY +L +IAVA I +V +GG + F+ + + L S
Sbjct: 5 MTMTRQFRDDENGAAMVEYSILIGIIAVASIMTVLAIGGWVNGRFSALCTALEAAS 60
>gi|253701798|ref|YP_003022987.1| hypothetical protein GM21_3202 [Geobacter sp. M21]
gi|251776648|gb|ACT19229.1| conserved hypothetical protein [Geobacter sp. M21]
Length = 64
Score = 41.8 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 30/48 (62%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
K L++ +G +EY L+ L+A+ +IA++ ++G + VF ++S +
Sbjct: 13 KQILKNTNGQGLVEYALILVLVAIVVIAALKSIGSETNKVFCNVSDHI 60
>gi|153008056|ref|YP_001369271.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
gi|151559944|gb|ABS13442.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
Length = 60
Score = 41.4 bits (96), Expect = 0.035, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 34/58 (58%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
M ++ F+++ +G+TAIEY L+ +L+++ II+ V + G + F D + + +
Sbjct: 1 MMPTLMTRFMKNRAGSTAIEYALIGTLVSIMIISGVALVAGNVGEKFNDTAIQFEQAT 58
>gi|167624209|ref|YP_001674503.1| hypothetical protein Shal_2285 [Shewanella halifaxensis HAW-EB4]
gi|167354231|gb|ABZ76844.1| hypothetical protein Shal_2285 [Shewanella halifaxensis HAW-EB4]
Length = 65
Score = 41.4 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++K F++DESG TA+EY + L+ +IA+ TLG TA ++S +N S
Sbjct: 6 LLKEFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGDNATAKIDCLASAVNGAS 59
>gi|220913378|ref|YP_002488687.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860256|gb|ACL40598.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 66
Score = 41.4 bits (96), Expect = 0.039, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
VK+ E GATA EY LL + IA+ IIA VT G L+ F+ + S++
Sbjct: 15 VKDRFSSEKGATATEYSLLVAFIALLIIAGVTLFGNALSGWFSTLGSRVGT 65
>gi|134291861|ref|YP_001115630.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134135050|gb|ABO59375.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 68
Score = 41.4 bits (96), Expect = 0.039, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
V ++ DE G T+IEY LLA++ A ++ +V L G + + I+S +
Sbjct: 10 VSRWIDDERGVTSIEYALLAAVFATVVLGAVVALKGSVQGAYDAIASIVTAA 61
>gi|319781140|ref|YP_004140616.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167028|gb|ADV10566.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 58
Score = 41.4 bits (96), Expect = 0.041, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I F DESGATAIEYGL+A+LIA+AII +G L +F + + +N
Sbjct: 3 KIACRFAWDESGATAIEYGLIAALIALAIITGAGAVGNSLNGIFTTVGTTVNSSG 57
>gi|258405295|ref|YP_003198037.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
gi|257797522|gb|ACV68459.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
Length = 56
Score = 41.4 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ + F DE GATA EY ++ SLIAV II +VT LG +F++ ++
Sbjct: 2 LNGLFTFFFDEQGATATEYAIMISLIAVVIIVAVTALGLATNDLFSEAKNEF 53
>gi|330938337|gb|EGH41969.1| hypothetical protein PSYPI_05933 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 68
Score = 41.4 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 33/53 (62%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+++FL+D+ A+AIEY ++ +++A+ + A VT +G + F I L K+
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGDAVKGQFNKIIGVLGGKA 66
>gi|163751740|ref|ZP_02158958.1| hypothetical protein KT99_12224 [Shewanella benthica KT99]
gi|161328392|gb|EDP99551.1| hypothetical protein KT99_12224 [Shewanella benthica KT99]
Length = 62
Score = 41.4 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
I +F++DESG TA+EY + L+ +IA+ TLG TA ++S +N
Sbjct: 5 QIFADFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGTNATAKINCLASAVN 56
>gi|33152390|ref|NP_873743.1| flp operon protein Flp2 [Haemophilus ducreyi 35000HP]
gi|21326703|gb|AAL92463.1| Flp2 [Haemophilus ducreyi]
gi|33148613|gb|AAP96132.1| flp operon protein Flp2 [Haemophilus ducreyi 35000HP]
Length = 81
Score = 41.4 bits (96), Expect = 0.046, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV---TTLGGKLTAVFADISSKLNPKS 58
++ F +++ G TAIEYGL+A +A+ IIA KL F+D+++ ++ +S
Sbjct: 21 IQRFRKNQQGVTAIEYGLIAVAVAILIIAVFYNNQGFLMKLKTKFSDLATGISAQS 76
>gi|194288840|ref|YP_002004747.1| flp pilin component [Cupriavidus taiwanensis LMG 19424]
gi|193222675|emb|CAQ68678.1| Flp pilin component [Cupriavidus taiwanensis LMG 19424]
Length = 57
Score = 41.4 bits (96), Expect = 0.046, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ D++G T+IEY LL LIAVAI+++V+T+G + ++ I+S++
Sbjct: 8 ISKLSHDDAGVTSIEYALLGMLIAVAIVSTVSTVGDAVKLMYEMIASRM 56
>gi|294012241|ref|YP_003545701.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
gi|292675571|dbj|BAI97089.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
Length = 65
Score = 41.0 bits (95), Expect = 0.047, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 28/55 (50%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
M+ ++N D SGA+A EY L+ +++ I + LG ++ + S+ +
Sbjct: 1 MNFLRNLWNDHSGASAAEYALILAIVGTGIALAAVGLGESISTAMNEASNCIKSP 55
>gi|170741514|ref|YP_001770169.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
gi|168195788|gb|ACA17735.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
Length = 51
Score = 41.0 bits (95), Expect = 0.047, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 39/50 (78%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++K+F DESGATAIEYGLLA+LIA+A+IA+ +++G L F +++ L
Sbjct: 1 MIKSFFYDESGATAIEYGLLAALIAIALIAAASSVGTNLGTAFQNVAGNL 50
>gi|332185257|ref|ZP_08387006.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332014981|gb|EGI57037.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 57
Score = 41.0 bits (95), Expect = 0.048, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
M+ ++ +++ GATAIEYGL+A+L+AVA IA ++ LGG L F I KL+
Sbjct: 1 MNTLRKMVKNNKGATAIEYGLIAALVAVAAIAGMSKLGGSLGTAFNTIGGKLDT 54
>gi|149184275|ref|ZP_01862593.1| hypothetical protein ED21_26193 [Erythrobacter sp. SD-21]
gi|148831595|gb|EDL50028.1| hypothetical protein ED21_26193 [Erythrobacter sp. SD-21]
Length = 60
Score = 41.0 bits (95), Expect = 0.050, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
M + ++E GATAIEYGL+A+LIAVA I ++ +LGG+LT F +SS ++
Sbjct: 1 MKFINKLRRNEEGATAIEYGLIAALIAVAAITAMQSLGGELTTTFNTVSSAMSTA 55
>gi|255262164|ref|ZP_05341506.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62]
gi|255104499|gb|EET47173.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62]
Length = 90
Score = 41.0 bits (95), Expect = 0.052, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 14 SGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
GA IEYGLL L+AV SV+TLG ++ FA+++++L+ +
Sbjct: 27 RGAALIEYGLLVGLVAVVANGSVSTLGEEIDGTFANVTAELSSNT 71
>gi|27378229|ref|NP_769758.1| PilA2 pilus assembly protein [Bradyrhizobium japonicum USDA 110]
gi|27351376|dbj|BAC48383.1| bsl3118 [Bradyrhizobium japonicum USDA 110]
Length = 54
Score = 41.0 bits (95), Expect = 0.053, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGK-LTAVFADISSK 53
M ++K+FL DES ATAIEY L+A+ IA+ I+ V G L F I +
Sbjct: 1 MALLKSFLADESAATAIEYCLIAAGIALVIVTVVNNTGSALLNNKFNSIDAA 52
>gi|294140770|ref|YP_003556748.1| Flp/Fap pilin component superfamily [Shewanella violacea DSS12]
gi|293327239|dbj|BAJ01970.1| Flp/Fap pilin component superfamily [Shewanella violacea DSS12]
Length = 64
Score = 41.0 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I +F++DESG TA+EY + L+ +IA+ LG T+ + ++S +N S
Sbjct: 5 QIFSDFIEDESGLTAVEYAIAGGLVVGGMIAAFNQLGTNATSKISCLASAVNGAS 59
>gi|83749641|ref|ZP_00946624.1| Putative Pilin Protein [Ralstonia solanacearum UW551]
gi|207728109|ref|YP_002256503.1| pilin protein [Ralstonia solanacearum MolK2]
gi|207744155|ref|YP_002260547.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|300704927|ref|YP_003746530.1| pilin transmembrane protein [Ralstonia solanacearum CFBP2957]
gi|83723702|gb|EAP70897.1| Putative Pilin Protein [Ralstonia solanacearum UW551]
gi|206591354|emb|CAQ56966.1| pilin protein [Ralstonia solanacearum MolK2]
gi|206595559|emb|CAQ62486.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|299072591|emb|CBJ43941.1| putative pilin transmembrane protein [Ralstonia solanacearum
CFBP2957]
Length = 58
Score = 40.7 bits (94), Expect = 0.062, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 35/54 (64%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++K F+++E GA +EY LL + +A+ ++ TT+ + A++ ++++L+ +
Sbjct: 4 MIKRFVREEDGAAGVEYALLLAFVALVMVTYGTTVKTAVGAIWNSVATQLSTAA 57
>gi|156977412|ref|YP_001448318.1| Flp pilus assembly protein [Vibrio harveyi ATCC BAA-1116]
gi|156529006|gb|ABU74091.1| hypothetical protein VIBHAR_06199 [Vibrio harveyi ATCC BAA-1116]
Length = 68
Score = 40.7 bits (94), Expect = 0.064, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG--GKLTAVFADISSKLN 55
+ F DE G TAIEYGL+A +AV + +V+ G G L A F +++ ++
Sbjct: 12 FLSKFKNDERGVTAIEYGLIAVAMAVLVTTAVSPSGFIGSLEAAFEQVATAIS 64
>gi|330953051|gb|EGH53311.1| hypothetical protein PSYCIT7_17084 [Pseudomonas syringae Cit 7]
Length = 68
Score = 40.7 bits (94), Expect = 0.066, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+++FL+D+ GA+AIEY ++ +++A+ + A VT +G + A F I L
Sbjct: 14 IQSFLKDKEGASAIEYAVIVAMVALVLFAMVTPMGDAVKAQFNKIILALG 63
>gi|317123661|ref|YP_004097773.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043]
gi|315587749|gb|ADU47046.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043]
Length = 59
Score = 40.7 bits (94), Expect = 0.066, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
++ E GATA+EYGL+ +LIAVAI+ +V LG L +FA + + +N
Sbjct: 8 LQTLRSREEGATAVEYGLMVALIAVAIMVTVGLLGDALDGLFARVLAAVNAA 59
>gi|312882141|ref|ZP_07741890.1| Flp pilus assembly protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370187|gb|EFP97690.1| Flp pilus assembly protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 68
Score = 40.7 bits (94), Expect = 0.076, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG--GKLTAVFADISSKLNPKS 58
+ F DE G TAIEYGL+A +AV + +V T G G+L F +++ +
Sbjct: 12 FLSQFKNDERGVTAIEYGLIAVAMAVLVTTAVGTEGFIGRLETAFTSVATAIETAG 67
>gi|319951067|ref|ZP_08024920.1| hypothetical protein ES5_15571 [Dietzia cinnamea P4]
gi|319435227|gb|EFV90494.1| hypothetical protein ES5_15571 [Dietzia cinnamea P4]
Length = 81
Score = 40.7 bits (94), Expect = 0.077, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 11 QDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ + GATA+EYGL+ LIAVAIIA+V G +L +F S++LN ++
Sbjct: 26 RKDRGATAVEYGLMVGLIAVAIIAAVIAFGDQLRGIFQGTSTQLNTET 73
>gi|241662168|ref|YP_002980528.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|309780763|ref|ZP_07675504.1| pilin transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|240864195|gb|ACS61856.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|308920445|gb|EFP66101.1| pilin transmembrane protein [Ralstonia sp. 5_7_47FAA]
Length = 58
Score = 40.7 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 37/54 (68%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++K F+++E GA +EY LL + +A+ ++AS T+ + ++++ I+++L+ +
Sbjct: 4 MIKRFVREEDGAAGVEYALLLAFVALVMVASGPTVKAAVGSIWSTIATQLSTAA 57
>gi|148553540|ref|YP_001261122.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148498730|gb|ABQ66984.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 55
Score = 40.7 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
M V L++ GATAIEYGL+A+LIAVA I ++T+LG +L F ++S+ +
Sbjct: 1 MKFVAKLLKNNKGATAIEYGLIAALIAVAAITAMTSLGNQLQKTFNNVSNNMKA 54
>gi|28871964|ref|NP_794583.1| hypothetical protein PSPTO_4849 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213968018|ref|ZP_03396164.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv.
tomato T1]
gi|301383666|ref|ZP_07232084.1| hypothetical protein PsyrptM_13578 [Pseudomonas syringae pv.
tomato Max13]
gi|302059965|ref|ZP_07251506.1| hypothetical protein PsyrptK_08235 [Pseudomonas syringae pv.
tomato K40]
gi|302131631|ref|ZP_07257621.1| hypothetical protein PsyrptN_09572 [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|28855217|gb|AAO58278.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213927361|gb|EEB60910.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv.
tomato T1]
gi|331014710|gb|EGH94766.1| hypothetical protein PLA106_02360 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 68
Score = 40.7 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+++FL+D+ A+AIEY ++ +++A+ + A VT +G + A F +I L
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGTAIKARFNEIIEALG 63
>gi|322419948|ref|YP_004199171.1| Flp/Fap pilin component [Geobacter sp. M18]
gi|320126335|gb|ADW13895.1| Flp/Fap pilin component [Geobacter sp. M18]
Length = 64
Score = 40.3 bits (93), Expect = 0.081, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ ++ L ++SG +EY L+ LIA+A+ A V TLG +L + I++ ++
Sbjct: 9 NRLRLVLGNDSGQGLVEYALILVLIAIAVFAMVQTLGVQLNGTYEKINTSVD 60
>gi|269926141|ref|YP_003322764.1| Flp/Fap pilin component [Thermobaculum terrenum ATCC BAA-798]
gi|269789801|gb|ACZ41942.1| Flp/Fap pilin component [Thermobaculum terrenum ATCC BAA-798]
Length = 121
Score = 40.3 bits (93), Expect = 0.083, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 14 SGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
G +EY L+ L+++A I ++ LGG+++ VF I+ L+
Sbjct: 76 EGQGMVEYALIIVLVSIAAIVALGLLGGQISNVFQRITQTLS 117
>gi|222524612|ref|YP_002569083.1| hypothetical protein Chy400_1336 [Chloroflexus sp. Y-400-fl]
gi|222448491|gb|ACM52757.1| hypothetical protein Chy400_1336 [Chloroflexus sp. Y-400-fl]
Length = 60
Score = 40.3 bits (93), Expect = 0.085, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
L E G EYGL+ +LIA+ + +++ +GG L+ ++ +++
Sbjct: 15 LHRERGQGLAEYGLIITLIALVCVLAISAIGGSLSDMYNTVAA 57
>gi|17545380|ref|NP_518782.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427672|emb|CAD14191.1| putative pilin transmembrane protein [Ralstonia solanacearum
GMI1000]
Length = 53
Score = 40.3 bits (93), Expect = 0.085, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 30/50 (60%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ K F+++E GA +EY LL + +A+ +I +T+ + ++ I++ L
Sbjct: 4 MFKRFVREEDGAAGVEYALLLTFVALVMITYGSTVKTAVGNIWNSIATAL 53
>gi|73539227|ref|YP_299594.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72122564|gb|AAZ64750.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 66
Score = 40.3 bits (93), Expect = 0.090, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
MK ++ F++D+ GA+AIEYGL+A LIA+AI AS TLG L F+++++++
Sbjct: 1 MK-KMLTRFIRDDRGASAIEYGLIAGLIALAIAASAGTLGDNLKNGFSNLATRVAA 55
>gi|84385687|ref|ZP_00988718.1| hypothetical protein V12B01_26174 [Vibrio splendidus 12B01]
gi|84379667|gb|EAP96519.1| hypothetical protein V12B01_26174 [Vibrio splendidus 12B01]
Length = 68
Score = 40.3 bits (93), Expect = 0.090, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG--GKLTAVFADISSKLNPKS 58
+ F DE G TAIEYGL+A +AV + +V G GKL A F + + S
Sbjct: 12 FLSQFKNDERGVTAIEYGLIAVAMAVLVTTAVGADGFIGKLEAAFTKVGDAITTAS 67
>gi|85708396|ref|ZP_01039462.1| hypothetical protein NAP1_04135 [Erythrobacter sp. NAP1]
gi|85689930|gb|EAQ29933.1| hypothetical protein NAP1_04135 [Erythrobacter sp. NAP1]
Length = 54
Score = 40.3 bits (93), Expect = 0.092, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M +DE GATAIEYGL+A+LIAVA +A++ TLG L F+ + S +
Sbjct: 1 MKFFNKLARDEQGATAIEYGLIAALIAVAAVAAMGTLGNTLADTFSQVESDM 52
>gi|328953763|ref|YP_004371097.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328454087|gb|AEB09916.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 58
Score = 39.9 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++K F+++E GA+A+EY +L I +IA + GKL ++K+
Sbjct: 4 MIKKFIREEDGASAVEYAVLVGAIGAVLIAGIYVFYGKLNTSVNSAATKIGTSG 57
>gi|296132735|ref|YP_003639982.1| Flp/Fap pilin component [Thermincola sp. JR]
gi|296031313|gb|ADG82081.1| Flp/Fap pilin component [Thermincola potens JR]
Length = 54
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 34/53 (64%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M V FL +E+G + EY L+ SLI V ++ + + G +++ +F++ S+++N
Sbjct: 1 MLTVTRFLVEENGQSLTEYALVLSLIVVTVVGILLSFGFRISNLFSNASAQIN 53
>gi|299067800|emb|CBJ39011.1| putative pilin transmembrane protein [Ralstonia solanacearum
CMR15]
Length = 53
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 31/50 (62%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++K F+++E GA +EY LL + +A+ +I +T+ + ++ I++ L
Sbjct: 4 MIKRFVREEDGAAGVEYALLLTFVALVMITYGSTVKTAVGNIWNSIATAL 53
>gi|312115331|ref|YP_004012927.1| Flp/Fap pilin component [Rhodomicrobium vannielii ATCC 17100]
gi|311220460|gb|ADP71828.1| Flp/Fap pilin component [Rhodomicrobium vannielii ATCC 17100]
Length = 60
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ F DE GA AIE GL+A+ VA+I + ++ +F + L
Sbjct: 5 LEEFWMDEQGAAAIELGLIAAGFCVALITLAGQMNDEVKIMFERVREML 53
>gi|283852354|ref|ZP_06369625.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
gi|283572311|gb|EFC20300.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
Length = 56
Score = 39.9 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ NF++DE GATA+EYGL+ +LIA I+ VTTLG L F +I++ ++
Sbjct: 5 ITNFVRDEEGATAVEYGLMVALIAAVIVGVVTTLGTTLQGTFTNITTAIS 54
>gi|330873639|gb|EGH07788.1| hypothetical protein PSYMP_04385 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330963440|gb|EGH63700.1| hypothetical protein PSYAC_02082 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 68
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 34/50 (68%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+++FL+D+ A+AIEY ++ +++A+ + A VT +G + A F +I + L
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGTAIKARFNEIITALG 63
>gi|163801680|ref|ZP_02195578.1| hypothetical protein 1103602000597_AND4_09507 [Vibrio sp. AND4]
gi|159174597|gb|EDP59399.1| hypothetical protein AND4_09507 [Vibrio sp. AND4]
Length = 70
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG--GKLTAVFADISSKLN 55
+ F +DE G TAIEYGL+A +AV + ++ T G G+L A F ++ S +
Sbjct: 12 FLSEFNKDERGVTAIEYGLIAVAMAVVLGLALGTDGFIGQLDAAFDEVESTIQ 64
>gi|239814529|ref|YP_002943439.1| Flp/Fap pilin component [Variovorax paradoxus S110]
gi|239801106|gb|ACS18173.1| Flp/Fap pilin component [Variovorax paradoxus S110]
Length = 58
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG--GKLTAVFADISSKLNPKS 58
+ + FL+DESGA IEY L+ +++++A++ ++ L G T +++ L +
Sbjct: 1 MFELFLKDESGAQVIEYALIIAVVSIALVVALRGLTDNGSFTTFLTHVTNCLTTTT 56
>gi|158421906|ref|YP_001523198.1| hypothetical protein AZC_0282 [Azorhizobium caulinodans ORS 571]
gi|158328795|dbj|BAF86280.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 54
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 32/40 (80%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLT 44
+++ F+++E G+TA+EYGL+A+ +++AI+ +T +G L+
Sbjct: 4 LLQRFVKEEHGSTALEYGLIAAGLSIAIVTVLTQVGLTLS 43
>gi|17545379|ref|NP_518781.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427671|emb|CAD14190.1| putative pilin transmembrane protein [Ralstonia solanacearum
GMI1000]
Length = 53
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 32/50 (64%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++K F+++E GA +EY LL + +A+ ++ +T+ + +V+ I++ L
Sbjct: 4 MIKRFVREEDGAAGVEYALLLTFVALVMVTYGSTVKTAVGSVWNSIANAL 53
>gi|326797324|ref|YP_004315144.1| Flp/Fap pilin component [Marinomonas mediterranea MMB-1]
gi|326548088|gb|ADZ93308.1| Flp/Fap pilin component [Marinomonas mediterranea MMB-1]
Length = 65
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAV---AIIASVTTLGGKLTAVFADISSKLN 55
+K FL DE G TAIEYG+LA+ +A I S L F+ I+ ++
Sbjct: 5 IKRFLSDERGVTAIEYGILAAAMAAAIGVIFGSDGVFVTALKDRFSSIADQIT 57
>gi|188581864|ref|YP_001925309.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
gi|179345362|gb|ACB80774.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
Length = 60
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADI 50
Q + GATAIEYGL+ + +A+AI+ + + G LT VF +
Sbjct: 11 RMSQHDGGATAIEYGLVCTFVALAILVGLQSFGSTLTEVFPKV 53
>gi|170692569|ref|ZP_02883731.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170142225|gb|EDT10391.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 57
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ K F++DE G TAIEYGL+A+LIA AI+A TTL ++A F I+ KL
Sbjct: 5 INSTKAFIRDEDGVTAIEYGLMAALIATAILAGYTTLANAVSAKFTAIAGKL 56
>gi|317403502|gb|EFV84005.1| hypothetical protein HMPREF0005_03133 [Achromobacter xylosoxidans
C54]
Length = 58
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ F +E G TA+EYGL+A IAVA++A++ T G L +F + +KL S
Sbjct: 5 LAQFWNEEEGITALEYGLIAGTIAVALVAALATFTGALGDLFTSLQAKLAAAS 57
>gi|332185116|ref|ZP_08386865.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332014840|gb|EGI56896.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 57
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
M ++ + + GATAIEYGL+A+LIAVA IA +++LGG L F I KL+
Sbjct: 1 MASIRKIIHNRKGATAIEYGLIAALIAVAAIAGMSSLGGSLGTAFNTIGGKLDT 54
>gi|299069502|emb|CBJ40771.1| putative Flp/Fap pilin component [Ralstonia solanacearum CMR15]
Length = 58
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ + FL+DE GATAIEYGLLA LIA AI A+VTTLG ++ F + + + +
Sbjct: 3 NAILQFLRDEQGATAIEYGLLAGLIAAAIAATVTTLGTEIKTAFGSVCTAIKGSA 57
>gi|197106456|ref|YP_002131833.1| Flp pilus assembly protein, pilin Flp [Phenylobacterium zucineum
HLK1]
gi|196479876|gb|ACG79404.1| Flp pilus assembly protein, pilin Flp [Phenylobacterium zucineum
HLK1]
Length = 83
Score = 39.9 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
++K D SGATAIEYGL+A+ IAVA+ A++ + LT F I L+
Sbjct: 27 KLIKKLAGDRSGATAIEYGLIAAFIAVALAAALPNVRTSLTETFGTIQGGLDTA 80
>gi|328953764|ref|YP_004371098.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328454088|gb|AEB09917.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 60
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 29/54 (53%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++K F+++E GA+A+EY +L I +IA + G+L ++K+
Sbjct: 4 LIKKFIREEDGASAVEYAVLVGAIGAVLIAGIYAFYGRLNTAIDSAATKIGTNG 57
>gi|325275760|ref|ZP_08141636.1| Flp/Fap pilin component [Pseudomonas sp. TJI-51]
gi|324099101|gb|EGB97071.1| Flp/Fap pilin component [Pseudomonas sp. TJI-51]
Length = 53
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
NFL + GA+ IEY ++A+++AV + A V + + F I + L
Sbjct: 6 MNFLHRKDGASGIEYAVIATMVAVVLAAFVGDISTAVNTTFTTIKNAL 53
>gi|212635457|ref|YP_002311982.1| hypothetical protein swp_2661 [Shewanella piezotolerans WP3]
gi|212556941|gb|ACJ29395.1| hypothetical protein swp_2661 [Shewanella piezotolerans WP3]
Length = 64
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++ F++DESG TA+EY + L+ +I + LG T+ ++S +N S
Sbjct: 6 LLTEFIEDESGLTAVEYAIAGGLVVGGMIGAFNLLGDNATSKINCLASAVNGAS 59
>gi|170724967|ref|YP_001758993.1| Flp/Fap pilin component [Shewanella woodyi ATCC 51908]
gi|169810314|gb|ACA84898.1| Flp/Fap pilin component [Shewanella woodyi ATCC 51908]
Length = 69
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG---GKLTAVFADISSKLNPKS 58
M + + +DE G TAIEYGL+ +AVA+ A+ + G L F I+ L +
Sbjct: 8 TMAFLATYKKDERGVTAIEYGLIGVAMAVALTAAFASDGNLMTALNTAFTKITDSLTKIT 67
>gi|157375512|ref|YP_001474112.1| hypothetical protein Ssed_2375 [Shewanella sediminis HAW-EB3]
gi|157317886|gb|ABV36984.1| hypothetical protein Ssed_2375 [Shewanella sediminis HAW-EB3]
Length = 66
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I F++DESG TA+EY + L+ +IA+ LG ++S + S
Sbjct: 5 QIFIEFIEDESGLTAVEYAIAGGLVVGGMIAAFNELGTNAQTKIECLASAVAGDS 59
>gi|170692568|ref|ZP_02883730.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170142224|gb|EDT10390.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 60
Score = 39.1 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
F++DE G TAIEYGL+A+LIA AI+A +TL ++ F I+ + +
Sbjct: 11 FIRDEDGVTAIEYGLMAALIATAILAGYSTLATAVSDKFTAIAGHVTSGT 60
>gi|322419947|ref|YP_004199170.1| Flp/Fap pilin component [Geobacter sp. M18]
gi|320126334|gb|ADW13894.1| Flp/Fap pilin component [Geobacter sp. M18]
Length = 65
Score = 39.1 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
L+ E G +EY L+ LIA+ +IA VT +G VF ++ LN
Sbjct: 19 LKSEKGQGLVEYALILVLIAIVVIAMVTGIGQNANEVFCQVNGALN 64
>gi|269836841|ref|YP_003319069.1| hypothetical protein Sthe_0810 [Sphaerobacter thermophilus DSM
20745]
gi|269786104|gb|ACZ38247.1| hypothetical protein Sthe_0810 [Sphaerobacter thermophilus DSM
20745]
Length = 63
Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 14 SGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
G +EY L+ LI+V I ++ LG K++ VF D++ L+
Sbjct: 19 EGQGLVEYALILVLISVVAIVAMQALGVKISEVFTDVTGTLS 60
>gi|323137854|ref|ZP_08072929.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322396857|gb|EFX99383.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVF 47
+ ++NFL D GATA+EY +A ++++ IIA TT+G KL+ ++
Sbjct: 2 LRSLRNFLVDTRGATALEYVTIAFMVSIIIIAGSTTIGTKLSTLY 46
>gi|116626782|ref|YP_828938.1| Flp/Fap pilin component [Candidatus Solibacter usitatus
Ellin6076]
gi|116229944|gb|ABJ88653.1| Flp/Fap pilin component [Candidatus Solibacter usitatus
Ellin6076]
Length = 60
Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 31/52 (59%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+V NF++DE G +EY L+ + + +A+I +V L + +++ ++ L+
Sbjct: 4 LVLNFVRDEQGQDLVEYALIVAAVGLALITTVNQLSQGIVSLYQSMTGDLSS 55
>gi|299067802|emb|CBJ39013.1| putative pilin transmembrane protein [Ralstonia solanacearum
CMR15]
Length = 53
Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 31/50 (62%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++K F+++E GA +EY LL + +A+ ++ +T+ + V+ I++ L
Sbjct: 4 MIKRFVREEDGAAGVEYALLLTFVALVMVTYGSTVKTAVGNVWNSIAAAL 53
>gi|254502513|ref|ZP_05114664.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11]
gi|222438584|gb|EEE45263.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11]
Length = 72
Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKL-TAVFADISSKLNPKS 58
++ + D SGAT +EYGLL + +++AI+ +V ++G + +F IS+ + +
Sbjct: 10 VNQFTRLIHDRSGATMVEYGLLVATLSIAILLTVGSIGETVRDDIFQVISNVMLTGA 66
>gi|328474266|gb|EGF45071.1| putative fimbrial protein [Vibrio parahaemolyticus 10329]
Length = 57
Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+++K+F++DE G T +EY L A+LI A + S L+ F ++S++N
Sbjct: 6 NLIKDFMEDEEGLTLLEYILGAALIVTAFLTS--GFWTTLSGKFTSVASQIN 55
>gi|302343423|ref|YP_003807952.1| Flp/Fap pilin component [Desulfarculus baarsii DSM 2075]
gi|301640036|gb|ADK85358.1| Flp/Fap pilin component [Desulfarculus baarsii DSM 2075]
Length = 57
Score = 38.7 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+K +DE G +A+EY LL +LI I + LG ++ + L+
Sbjct: 7 IKRLFKDEQGISAVEYALLLALIGGGIATAAFLLGDQVETNITTATGNLS 56
>gi|52425837|ref|YP_088974.1| hypothetical protein MS1782 [Mannheimia succiniciproducens
MBEL55E]
gi|52307889|gb|AAU38389.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 75
Score = 38.7 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV---TTLGGKLTAVFADISSKLNPKS 58
++ F QD G TAIEYGL+A ++A I+ T+ L F+D+S + +
Sbjct: 17 IRRFKQDHKGVTAIEYGLIAVVMAAFIVYVFADDTSFVQSLKEKFSDVSKSVGNAT 72
>gi|33152391|ref|NP_873744.1| flp operon protein Flp1 [Haemophilus ducreyi 35000HP]
gi|21326702|gb|AAL92462.1| Flp1 [Haemophilus ducreyi]
gi|33148614|gb|AAP96133.1| flp operon protein Flp1 [Haemophilus ducreyi 35000HP]
Length = 85
Score = 38.7 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV---TTLGGKLTAVFADISSKLNPK 57
++ F +++ G TAIEYGL+A +A+ IIA KL F+D+++ ++
Sbjct: 21 IQRFRKNQQGVTAIEYGLIAVAVAILIIAVFYNNQGFLMKLKTKFSDLATGISSA 75
>gi|190574775|ref|YP_001972620.1| putative pilin subunit [Stenotrophomonas maltophilia K279a]
gi|190012697|emb|CAQ46325.1| putative pilin subunit [Stenotrophomonas maltophilia K279a]
Length = 68
Score = 38.7 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIA-SVTTLGGKLTAVFADISS 52
++ FL++E G TA+EYGLLA++IA +IA + G +F ++S
Sbjct: 5 IRKFLKEEDGVTALEYGLLAAVIAGILIAVGNKEIKGFFETLFKNLSD 52
>gi|319941905|ref|ZP_08016226.1| hypothetical protein HMPREF9464_01445 [Sutterella wadsworthensis
3_1_45B]
gi|319804558|gb|EFW01428.1| hypothetical protein HMPREF9464_01445 [Sutterella wadsworthensis
3_1_45B]
Length = 64
Score = 38.7 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAI---IASVTTLGGKLTAVFADISSKLNPKS 58
++ F++ G TAIEYG+LA+ +A+ I ++S L ++ +F I L +
Sbjct: 7 IRLFIRSRRGVTAIEYGILAAGVAIVIGALVSSDGPLATAISDLFKGIVDHLPTQG 62
>gi|227819049|ref|YP_002823020.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234]
gi|227338048|gb|ACP22267.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234]
Length = 51
Score = 38.7 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 2/38 (5%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGG 41
+++ F++ ESGATAIEYGL+ LIAV I +V T+G
Sbjct: 3 NLLLRFVRHESGATAIEYGLITGLIAV--ITAVQTVGT 38
>gi|297568756|ref|YP_003690100.1| Flp/Fap pilin component [Desulfurivibrio alkaliphilus AHT2]
gi|296924671|gb|ADH85481.1| Flp/Fap pilin component [Desulfurivibrio alkaliphilus AHT2]
Length = 67
Score = 38.7 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 31/56 (55%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ +K +++ GATAIEY ++ +++ +IA LG ++ A+ ++ ++
Sbjct: 9 LQQLKRSSKNQEGATAIEYAMIVAVMTGVVIAGYQLLGEQILALLQSVAEQITGPG 64
>gi|221633433|ref|YP_002522658.1| hypothetical protein trd_1455 [Thermomicrobium roseum DSM 5159]
gi|221155851|gb|ACM04978.1| hypothetical protein trd_1455 [Thermomicrobium roseum DSM 5159]
Length = 71
Score = 38.7 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 11 QDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ G +EY L+ +L+++A+I ++T L G + VF+ I L+
Sbjct: 19 RAAEGQGLVEYALIIALVSIALIFALTALAGGIGNVFSTIQGALS 63
>gi|325964110|ref|YP_004242016.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
gi|323470197|gb|ADX73882.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
Length = 60
Score = 38.7 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 8 NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++E GAT +EYG++ + IAV ++A+V LG K+ +F +S+ +
Sbjct: 14 RLAREEKGATMVEYGIMVAFIAVLVMAAVIILGPKIAGLFTSVSTAI 60
>gi|289675701|ref|ZP_06496591.1| hypothetical protein PsyrpsF_20686 [Pseudomonas syringae pv.
syringae FF5]
Length = 68
Score = 38.7 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+++FL+D+ A+AIEY ++ +++A+ + A VT +G + A F I L
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGDAVKAQFNKIILALG 63
>gi|295700374|ref|YP_003608267.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
gi|295439587|gb|ADG18756.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
Length = 56
Score = 38.7 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
F++DE G TAIEYGLLA LIA+ II VT LG L +F +++ +
Sbjct: 9 ARFVRDEDGVTAIEYGLLAGLIALLIIGGVTLLGQHLQTIFNNLADSV 56
>gi|46580521|ref|YP_011329.1| pilin [Desulfovibrio vulgaris str. Hildenborough]
gi|120602162|ref|YP_966562.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|46449940|gb|AAS96589.1| pilin, putative [Desulfovibrio vulgaris str. Hildenborough]
gi|120562391|gb|ABM28135.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|311234260|gb|ADP87114.1| Flp/Fap pilin component [Desulfovibrio vulgaris RCH1]
Length = 57
Score = 38.7 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
M + ++E GATA+EYGL+A+LIA I+A+VT LG K+++ F+ I SK+
Sbjct: 1 MKTIIRLFKEEEGATALEYGLIAALIAAVIVAAVTALGTKVSSTFSYIDSKMPTPG 56
>gi|218887831|ref|YP_002437152.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758785|gb|ACL09684.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 38.3 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I+ + DE GATA+EYGL+A+LIA I+A+VT LG K+++ F+ I SK+
Sbjct: 3 KIIARLINDEEGATALEYGLIAALIAAVIVAAVTALGTKVSSTFSYIDSKMPTPG 57
>gi|238027722|ref|YP_002911953.1| putative fimbriae assembly-like protein [Burkholderia glumae
BGR1]
gi|237876916|gb|ACR29249.1| Putative fimbriae assembly related protein [Burkholderia glumae
BGR1]
Length = 56
Score = 38.3 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
++ FL++E+G TAIEYGL+A +IA A T L +T F+ +S
Sbjct: 4 LLGRFLEEEAGTTAIEYGLIAGVIAGAAGYMATNLSDDVTQAFSFAAS 51
>gi|284991845|ref|YP_003410399.1| Flp/Fap pilin protein [Geodermatophilus obscurus DSM 43160]
gi|284065090|gb|ADB76028.1| Flp/Fap pilin component [Geodermatophilus obscurus DSM 43160]
Length = 79
Score = 38.3 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 33/49 (67%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ ++E GATA+EYGL+ LIAV IIA+V LG KL +F I +KL
Sbjct: 21 ERLEREEKGATAVEYGLMVGLIAVVIIAAVALLGTKLDGLFDTIGAKLG 69
>gi|86748910|ref|YP_485406.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
gi|86571938|gb|ABD06495.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
Length = 54
Score = 38.3 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
I F++DESGATAIEYGL+A+ IA+AIIA + +G KL F I++ L
Sbjct: 4 IFARFVKDESGATAIEYGLIAAGIALAIIAVINGMGTKLNTAFTSINTALK 54
>gi|239814528|ref|YP_002943438.1| hypothetical protein Vapar_1521 [Variovorax paradoxus S110]
gi|239801105|gb|ACS18172.1| hypothetical protein Vapar_1521 [Variovorax paradoxus S110]
Length = 69
Score = 38.3 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLG---GKLTAVFADISSKLNPKS 58
++FL+D+ GA IEY L+ ++I++A++ ++ L G T +++ L +
Sbjct: 13 RSFLRDDDGAQVIEYALIIAVISIALVVALKGLTANNGGFTTFITHVTNCLTTTT 67
>gi|82703480|ref|YP_413046.1| Flp/Fap pilin component [Nitrosospira multiformis ATCC 25196]
gi|82411545|gb|ABB75654.1| Flp/Fap pilin component [Nitrosospira multiformis ATCC 25196]
Length = 60
Score = 38.3 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 35/50 (70%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+K FL DE G TAIEY L+A+LIAVAII +V +G L VF IS+ L+
Sbjct: 8 MKQFLNDEEGVTAIEYALIAALIAVAIITAVRQVGTDLNLVFGAISTALS 57
>gi|94497283|ref|ZP_01303854.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58]
gi|94423146|gb|EAT08176.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58]
Length = 61
Score = 38.3 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 33/49 (67%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ ++ E GATA+EYGL+ ++I +A++ +++ + + ++ D+ +K+
Sbjct: 11 QGLIKCERGATAVEYGLILAMIVLAMLVALSNVAERTIHMWDDVDNKVT 59
>gi|90411210|ref|ZP_01219223.1| hypothetical protein P3TCK_06577 [Photobacterium profundum 3TCK]
gi|90328056|gb|EAS44377.1| hypothetical protein P3TCK_06577 [Photobacterium profundum 3TCK]
Length = 57
Score = 38.3 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ F +DE G T +EY + SL+ A++ + T+LG K+T+ +++ ++
Sbjct: 6 QSLIEFWKDEEGLTTVEYAIAGSLVGAAVVGAFTSLGEKVTSSVNAMATAIS 57
>gi|260892666|ref|YP_003238763.1| Flp/Fap pilin component [Ammonifex degensii KC4]
gi|260864807|gb|ACX51913.1| Flp/Fap pilin component [Ammonifex degensii KC4]
Length = 67
Score = 38.3 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
L+ E G EYGL+ +L+A+A+I ++T LG + F ++ +N
Sbjct: 16 LKSEEGQGLSEYGLILALVAIAVILALTALGIVIKNKFKHVAETIN 61
>gi|152994344|ref|YP_001339179.1| Flp/Fap pilin component [Marinomonas sp. MWYL1]
gi|150835268|gb|ABR69244.1| Flp/Fap pilin component [Marinomonas sp. MWYL1]
Length = 65
Score = 38.3 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAV---AIIASVTTLGGKLTAVFADISSKLN 55
V+ FL DE G TAIEYG+LA+ +A I S L F+ I+ ++
Sbjct: 5 VRRFLSDERGVTAIEYGILAAAMAAAIGVIFGSDGVFVTALKERFSSIADQIT 57
>gi|84387250|ref|ZP_00990271.1| hypothetical protein V12B01_22511 [Vibrio splendidus 12B01]
gi|84377897|gb|EAP94759.1| hypothetical protein V12B01_22511 [Vibrio splendidus 12B01]
Length = 56
Score = 38.3 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ K F++DE G T IEY + A+L+ + + + LG L A I + L
Sbjct: 5 LNNCKEFMKDEEGLTVIEYVIGAALLVLGLTTVFSGLGTTLAAKLNTIVNGL 56
>gi|254780736|ref|YP_003065149.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040413|gb|ACT57209.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 60
Score = 38.0 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 40/53 (75%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ + L+DESGA AIEYG+L +LIAVAIIA+VT LGG L F + +++++
Sbjct: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
>gi|218887832|ref|YP_002437153.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758786|gb|ACL09685.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 38.0 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I+ + DE GATA+EYGL+A+LIA I+A+VT LG K++A F+ I SK+
Sbjct: 3 KIIARLINDEEGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKMPTPG 57
>gi|219849039|ref|YP_002463472.1| hypothetical protein Cagg_2152 [Chloroflexus aggregans DSM 9485]
gi|219543298|gb|ACL25036.1| hypothetical protein Cagg_2152 [Chloroflexus aggregans DSM 9485]
Length = 60
Score = 38.0 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 26/40 (65%)
Query: 13 ESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
E G EYGL+ +LIA+ + ++ ++GG L+ ++ +++
Sbjct: 18 ERGQGMAEYGLIITLIALVCVLAMISIGGSLSDMYNTVAA 57
>gi|300692327|ref|YP_003753322.1| pilin transmembrane protein [Ralstonia solanacearum PSI07]
gi|299079387|emb|CBJ52058.1| putative pilin transmembrane protein [Ralstonia solanacearum
PSI07]
Length = 60
Score = 38.0 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 30/53 (56%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+K F ++E A +EY LL +++A+ + AS T++ + ++ IS L +
Sbjct: 8 IKQFAREEDAAAGVEYALLLAMVALVMAASYTSVKTAVGNIWTAISGDLTAAA 60
>gi|110635337|ref|YP_675545.1| hypothetical protein Meso_3008 [Mesorhizobium sp. BNC1]
gi|110286321|gb|ABG64380.1| hypothetical protein Meso_3008 [Chelativorans sp. BNC1]
Length = 84
Score = 38.0 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 6 VKNFLQD-ESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
VK+FL+ + GATA+E L+A ++ +AI+A + L L +A ++ L
Sbjct: 30 VKHFLRSSKDGATAVECALIAGILVIAIVAGLAELSRVLGHTYAPVAEDL 79
>gi|209546485|ref|YP_002278403.1| hypothetical protein Rleg2_4405 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537729|gb|ACI57663.1| hypothetical protein Rleg2_4405 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 65
Score = 38.0 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
++ V+ F ++E G EY +L +L+ +I +VT G L V+ + K
Sbjct: 5 VNCVRAFAREEDGVALTEYLILLALLVGGVIGAVTLAGTNLATVWNGWAGWFTSK 59
>gi|149911629|ref|ZP_01900240.1| hypothetical protein PE36_02929 [Moritella sp. PE36]
gi|149805299|gb|EDM65313.1| hypothetical protein PE36_02929 [Moritella sp. PE36]
Length = 90
Score = 37.6 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
+ + NF+ DE G TA+EY L +L+ ++ + LG + +++S
Sbjct: 5 VRFIDNFIHDEQGLTAVEYALAGALVVSSLASGFIALGSGASNNITELAS 54
>gi|118581117|ref|YP_902367.1| hypothetical protein Ppro_2707 [Pelobacter propionicus DSM 2379]
gi|118503827|gb|ABL00310.1| hypothetical protein Ppro_2707 [Pelobacter propionicus DSM 2379]
Length = 106
Score = 37.6 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 13 ESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
E +EY L+ LIA+ ++A + +GGK +++ ++S +
Sbjct: 63 EKAQAIVEYALILLLIAIVVVAMLKGIGGKTNTMYSTVNSAFSS 106
>gi|153834036|ref|ZP_01986703.1| putative fimbrial protein [Vibrio harveyi HY01]
gi|148869591|gb|EDL68581.1| putative fimbrial protein [Vibrio harveyi HY01]
Length = 57
Score = 37.6 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+++K+F++DE G T +EY L A+LI A + S L+ F+ ++ +++
Sbjct: 6 NLIKDFMEDEEGLTLLEYILGAALIVTAFLTS--GFWTTLSGKFSSVAGRISS 56
>gi|28899197|ref|NP_798802.1| putative fimbrial protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153836832|ref|ZP_01989499.1| putative fimbrial protein [Vibrio parahaemolyticus AQ3810]
gi|260361565|ref|ZP_05774592.1| putative fimbrial protein [Vibrio parahaemolyticus K5030]
gi|260876722|ref|ZP_05889077.1| putative fimbrial protein [Vibrio parahaemolyticus AN-5034]
gi|260898199|ref|ZP_05906695.1| putative fimbrial protein [Vibrio parahaemolyticus Peru-466]
gi|260900393|ref|ZP_05908788.1| putative fimbrial protein [Vibrio parahaemolyticus AQ4037]
gi|28807421|dbj|BAC60686.1| putative fimbrial protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149749978|gb|EDM60723.1| putative fimbrial protein [Vibrio parahaemolyticus AQ3810]
gi|308089071|gb|EFO38766.1| putative fimbrial protein [Vibrio parahaemolyticus Peru-466]
gi|308091431|gb|EFO41126.1| putative fimbrial protein [Vibrio parahaemolyticus AN-5034]
gi|308109139|gb|EFO46679.1| putative fimbrial protein [Vibrio parahaemolyticus AQ4037]
gi|308113986|gb|EFO51526.1| putative fimbrial protein [Vibrio parahaemolyticus K5030]
Length = 57
Score = 37.6 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+++K+F++DE G T +EY L A+LI A + S L F ++S++N
Sbjct: 6 NLIKDFMEDEEGLTLLEYILGAALIVTAFLTS--GFWTTLAGKFTSVASQIN 55
>gi|296444357|ref|ZP_06886322.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258004|gb|EFH05066.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 55
Score = 37.6 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVF 47
+ FL DE GAT+IEY + + +++ I ++ +G KL++ +
Sbjct: 3 RSLCRFLADEIGATSIEYATIGAFVSILIYSATKVIGTKLSSAY 46
>gi|295700373|ref|YP_003608266.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
gi|295439586|gb|ADG18755.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
Length = 56
Score = 37.6 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
F+ DE G TAIEYGLLA LIA+ II VTTLG L+A+F +++ +
Sbjct: 11 FMHDEDGVTAIEYGLLAGLIALLIIGGVTTLGTNLSAIFNNLADSV 56
>gi|221067362|ref|ZP_03543467.1| pilus subunit protein PilA [Comamonas testosteroni KF-1]
gi|220712385|gb|EED67753.1| pilus subunit protein PilA [Comamonas testosteroni KF-1]
Length = 69
Score = 37.6 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTL---GGKLTAVFADISSKLNPKS 58
H + +F +D+ GA +EY L+ +++++A++ ++ L GG ++ +++ L +
Sbjct: 10 HSLLSFARDDEGAQVVEYALIIAVVSIALVVALKALTSSGGGFSSFITRVTNCLTTAT 67
>gi|27381698|ref|NP_773227.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
gi|27354867|dbj|BAC51852.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
Length = 51
Score = 37.6 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F +ESGATAIEYGL+A+ IA+AII V LG + F IS+ L
Sbjct: 1 MILKFWSNESGATAIEYGLIAAGIALAIITVVNGLGTTMNEKFTSISTSLK 51
>gi|239905966|ref|YP_002952705.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795830|dbj|BAH74819.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
Length = 53
Score = 37.6 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 11 QDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISS 52
+ E GAT++EY L+ASLIA A+V G + +F ++
Sbjct: 9 RHEDGATSVEYALMASLIAAVAAAAVGQFGLAVLNLFQIVAG 50
>gi|87199923|ref|YP_497180.1| hypothetical protein Saro_1906 [Novosphingobium aromaticivorans
DSM 12444]
gi|87135604|gb|ABD26346.1| hypothetical protein Saro_1906 [Novosphingobium aromaticivorans
DSM 12444]
Length = 62
Score = 37.6 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 1 MKMH-IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADI 50
M M +++ +++ESGATAIEYGLL + I +A + + + ++ +
Sbjct: 1 MTMKSVLRKIIRNESGATAIEYGLLIASIGLAATFGMKSFSEAVYNLYVTV 51
>gi|149188867|ref|ZP_01867157.1| hypothetical protein VSAK1_05940 [Vibrio shilonii AK1]
gi|148837287|gb|EDL54234.1| hypothetical protein VSAK1_05940 [Vibrio shilonii AK1]
Length = 72
Score = 37.2 bits (85), Expect = 0.69, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG--GKLTAVFADISSKLN 55
+ F D+ G TAIEYGL+ +AV + ++ + G G+L FA+I++ +
Sbjct: 12 FLSQFKNDQRGVTAIEYGLIGVAMAVLLSVALGSTGFIGELKTAFANIATTIK 64
>gi|254178185|ref|ZP_04884840.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399]
gi|254199900|ref|ZP_04906266.1| pilin, flp/fap family [Burkholderia mallei FMH]
gi|254206232|ref|ZP_04912584.1| pilin, flp/fap family [Burkholderia mallei JHU]
gi|254358351|ref|ZP_04974624.1| pilin, flp/fap family [Burkholderia mallei 2002721280]
gi|147749496|gb|EDK56570.1| pilin, flp/fap family [Burkholderia mallei FMH]
gi|147753675|gb|EDK60740.1| pilin, flp/fap family [Burkholderia mallei JHU]
gi|148027478|gb|EDK85499.1| pilin, flp/fap family [Burkholderia mallei 2002721280]
gi|160699224|gb|EDP89194.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399]
Length = 42
Score = 37.2 bits (85), Expect = 0.70, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 31/41 (75%)
Query: 17 TAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
TAIEYGL+A LIAVAI +V T+G L+A+F+ I+SKL
Sbjct: 2 TAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPAA 42
>gi|114321313|ref|YP_742996.1| Flp/Fap pilin component [Alkalilimnicola ehrlichii MLHE-1]
gi|114227707|gb|ABI57506.1| Flp/Fap pilin component [Alkalilimnicola ehrlichii MLHE-1]
Length = 61
Score = 37.2 bits (85), Expect = 0.70, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ +DE GA+AIEY L+A+++AVA++A V + +T +F DI + L
Sbjct: 3 KFLLKLWKDEEGASAIEYALIAAMVAVALVAFVGPVRDAITGIFNDILNALT 54
>gi|190149869|ref|YP_001968394.1| flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|307263193|ref|ZP_07544814.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|189915000|gb|ACE61252.1| flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|306871555|gb|EFN03278.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 78
Score = 37.2 bits (85), Expect = 0.76, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV---TTLGGKLTAVFADISSKLN 55
++ F +++ G TAIEYGL+A +A+ I+A +L F ++ +N
Sbjct: 17 IRRFKENQQGVTAIEYGLIAVAVAILIVAVFYNDNGFIQQLKDKFEALTKTIN 69
>gi|254522212|ref|ZP_05134267.1| Flp/Fap pilin component superfamily protein [Stenotrophomonas sp.
SKA14]
gi|219719803|gb|EED38328.1| Flp/Fap pilin component superfamily protein [Stenotrophomonas sp.
SKA14]
Length = 62
Score = 37.2 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIA-SVTTLGGKLTAVFADISS 52
++ FL++E G TA+EYGLLA++IA +IA T + T +F ++
Sbjct: 5 IRTFLKEEDGVTALEYGLLAAVIAGVLIAVGRTQITSFFTTLFTHLTD 52
>gi|293391335|ref|ZP_06635669.1| fimbrial protein Flp precursor [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|15487345|dbj|BAB64544.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702512|gb|AAL93276.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702514|gb|AAL93277.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702518|gb|AAL93279.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702520|gb|AAL93280.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|32452619|gb|AAP43981.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|290951869|gb|EFE01988.1| fimbrial protein Flp precursor [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 75
Score = 37.2 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGG---KLTAVFADISSKLNPKS 58
+ +++F ++++G TAIEYGL+A +AV I+A + GG KL + F D++S ++ S
Sbjct: 14 IEAIRSFKKNQAGVTAIEYGLIAIAVAVLIVAVFYSEGGFIAKLQSKFNDLTSTISSAS 72
>gi|257790308|ref|YP_003180914.1| hypothetical protein Elen_0540 [Eggerthella lenta DSM 2243]
gi|325830443|ref|ZP_08163900.1| hypothetical protein HMPREF9404_3112 [Eggerthella sp. HGA1]
gi|257474205|gb|ACV54525.1| hypothetical protein Elen_0540 [Eggerthella lenta DSM 2243]
gi|325487910|gb|EGC90348.1| hypothetical protein HMPREF9404_3112 [Eggerthella sp. HGA1]
Length = 66
Score = 37.2 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
V+ L E G EY +L ++ V I ++T KL ++ I+ +N
Sbjct: 15 VRRVLAREDGQGTTEYAILVGVLVVIAIIAITVFRPKLQELWDSIADGINA 65
>gi|327537176|gb|EGF23925.1| Flp/Fap pilin component [Rhodopirellula baltica WH47]
Length = 54
Score = 37.2 bits (85), Expect = 0.83, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M ++ FL +E G TA+EY ++ SLI V ++ L + + + S +
Sbjct: 1 MRSIQRFLLEEDGPTAVEYAVMLSLIIVTASVGISILVTETSNSLQNSSDAI 52
>gi|294102194|ref|YP_003554052.1| hypothetical protein Amico_1206 [Aminobacterium colombiense DSM
12261]
gi|293617174|gb|ADE57328.1| hypothetical protein Amico_1206 [Aminobacterium colombiense DSM
12261]
Length = 49
Score = 37.2 bits (85), Expect = 0.85, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 9 FLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
F DE G EYG++ +LI+VA + ++ +G K+ +F + +S L
Sbjct: 3 FFTDEGGQGLAEYGVILALISVAAVVVLSLIGPKVLQLFTNANSVL 48
>gi|218710410|ref|YP_002418031.1| hypothetical protein VS_2447 [Vibrio splendidus LGP32]
gi|218323429|emb|CAV19606.1| hypothetical protein VS_2447 [Vibrio splendidus LGP32]
Length = 56
Score = 37.2 bits (85), Expect = 0.85, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ K F++DE G T IEY + A+L+ + + T G L+A +I + +
Sbjct: 5 LNNCKEFMKDEEGLTVIEYVIGAALLVLGLTTIFTGFGAALSAKLNNIINSI 56
>gi|171920997|gb|ACB59180.1| Flp1 [Actinobacillus suis ATCC 33415]
Length = 81
Score = 36.8 bits (84), Expect = 0.92, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGG---KLTAVFADISSKLNP 56
++NF Q++ G TAIEYGL+A +A+ II GG L A FAD++ ++
Sbjct: 17 IRNFKQNQQGVTAIEYGLIAVALAILIITVFYNDGGFIQSLKAKFADLTKSIDS 70
>gi|148556408|ref|YP_001263990.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148501598|gb|ABQ69852.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 63
Score = 36.8 bits (84), Expect = 0.92, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+K ++E GA+A+EY +L I +A+ A T G L+ + + + +
Sbjct: 9 MKRLSREEKGASAVEYAILVGAIGIALSAGATNFGNGLSNKLSGMLNVITFPG 61
>gi|19702498|gb|AAL93269.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702508|gb|AAL93274.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|307133492|dbj|BAJ19004.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV---TTLGGKLTAVFADISSKLNPK 57
+++F ++E+G TAIEYGL+A +AV I+A L F ++S ++
Sbjct: 17 IRSFRKNEAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIKGLQNKFNQLTSTVSSA 71
>gi|320156050|ref|YP_004188429.1| hypothetical protein VVM_02383 [Vibrio vulnificus MO6-24/O]
gi|319931362|gb|ADV86226.1| hypothetical protein VVMO6_01204 [Vibrio vulnificus MO6-24/O]
Length = 58
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 5 IVKNFLQDESGATAIEYGL---LASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++K F+ DESGATAIEYG+ + +AI S L F I + LNP
Sbjct: 1 MLKQFINDESGATAIEYGILAAGLAAGVLAIFGSDGVFISALKEKFLGIVNSLNPAG 57
>gi|148976667|ref|ZP_01813354.1| hypothetical protein VSWAT3_19746 [Vibrionales bacterium SWAT-3]
gi|145964018|gb|EDK29276.1| hypothetical protein VSWAT3_19746 [Vibrionales bacterium SWAT-3]
Length = 62
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 29/56 (51%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ K F+ DE G T IEY + A+++ + + + +G L+ + I + ++ +
Sbjct: 5 LKSCKEFMNDEEGLTVIEYVIGAAMLVLGLTTIFSGIGNTLSNKLSAIVNAISTTT 60
>gi|307294422|ref|ZP_07574266.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
gi|306880573|gb|EFN11790.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
Length = 59
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
M +KN DE GA+A EY L+ +++ I + LGG ++ + +N
Sbjct: 1 MTFIKNLWADECGASAAEYALILAIVGTGIALAAFQLGGAISGAMNTAKNCINTA 55
>gi|320160318|ref|YP_004173542.1| hypothetical protein ANT_09080 [Anaerolinea thermophila UNI-1]
gi|319994171|dbj|BAJ62942.1| hypothetical protein ANT_09080 [Anaerolinea thermophila UNI-1]
Length = 226
Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 13 ESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
E G IEY L +L+ VA+ S+ +G L F + ++
Sbjct: 8 EQGQGLIEYALFVALLLVAVYLSLQAMGLSLRDAFTLVYCGIS 50
>gi|317154608|ref|YP_004122656.1| Flp/Fap pilin component [Desulfovibrio aespoeensis Aspo-2]
gi|316944859|gb|ADU63910.1| Flp/Fap pilin component [Desulfovibrio aespoeensis Aspo-2]
Length = 60
Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 40/56 (71%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
M + N + +E GATA+EYGLLA+LIA AI+ +VTTLGG ++ F+ I++ + +
Sbjct: 1 MSKIMNLIMNEEGATALEYGLLAALIAAAIVGAVTTLGGVVSTTFSSIATSMQAAT 56
>gi|83312837|ref|YP_423101.1| Flp pilus assembly protein, pilin Flp [Magnetospirillum
magneticum AMB-1]
gi|82947678|dbj|BAE52542.1| Flp pilus assembly protein, pilin Flp [Magnetospirillum
magneticum AMB-1]
Length = 64
Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ +DE GATAIEYGL+A+LI++ I + +G ++ A F +I+ +
Sbjct: 15 LIIKLSRDEQGATAIEYGLIAALISIIAIPGMLMVGPRILAAFTNIAGSM 64
>gi|217978824|ref|YP_002362971.1| Flp/Fap pilin component [Methylocella silvestris BL2]
gi|217504200|gb|ACK51609.1| Flp/Fap pilin component [Methylocella silvestris BL2]
Length = 61
Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ E G TAIEYGL+ASLIA+AII +VT +G L+ +F ++ K+
Sbjct: 14 IDSEQGVTAIEYGLIASLIAIAIIVAVTLVGTNLSGLFTYVAGKVVAP 61
>gi|218887833|ref|YP_002437154.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758787|gb|ACL09686.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ +DE GATA+EYGL+A+LIA I+A+VT LG K++A F+ I SK+
Sbjct: 5 ITTLFRDEEGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKMPTPG 57
>gi|146340336|ref|YP_001205384.1| hypothetical protein BRADO3363 [Bradyrhizobium sp. ORS278]
gi|146193142|emb|CAL77154.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 183
Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTL 39
+ ++FL D GATA+E+GL+A+ +IA + T
Sbjct: 11 RGRFCRDFLGDRRGATAVEFGLVAAPFLALVIALIQTF 48
>gi|283852166|ref|ZP_06369439.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
gi|283572392|gb|EFC20379.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
Length = 58
Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ FL DESGAT+ EY +LASL+A +A VT G + A+F
Sbjct: 5 ILRFLNDESGATSSEYAILASLVAGVAVAVVTGFGLSVRALFQKAQDAF 53
>gi|221067363|ref|ZP_03543468.1| hypothetical protein CtesDRAFT_PD2700 [Comamonas testosteroni
KF-1]
gi|220712386|gb|EED67754.1| hypothetical protein CtesDRAFT_PD2700 [Comamonas testosteroni
KF-1]
Length = 65
Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTL-GGKLTAVFADISSKLN 55
+K+ L+D+ GA +EY L+ +++++A++ ++ +L GG+ +++ L
Sbjct: 11 LKHLLRDDEGAQVVEYALIIAVVSIALVLAIQSLAGGQFADFITRVTNCLT 61
>gi|163857696|ref|YP_001631994.1| Flp pilin [Bordetella petrii DSM 12804]
gi|163261424|emb|CAP43726.1| Flp pilin [Bordetella petrii]
Length = 60
Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
MK + F DE G T +EY +LA+L+ + V +L L F I + L
Sbjct: 1 MKEQFL-RFWNDEEGVTTLEYAILAALLVAGLATVVVSLTDGLQDFFTTIVTNLKA 55
>gi|120602163|ref|YP_966563.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|120562392|gb|ABM28136.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|311234259|gb|ADP87113.1| Flp/Fap pilin component [Desulfovibrio vulgaris RCH1]
Length = 58
Score = 36.4 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 40/54 (74%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
I++ ++E+GATA+EYGL+A+LIA I+A+VT LG K++A F+ I SK+
Sbjct: 4 IMQRLFKEETGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKMPTPG 57
>gi|269126098|ref|YP_003299468.1| Flp/Fap pilin component [Thermomonospora curvata DSM 43183]
gi|268311056|gb|ACY97430.1| Flp/Fap pilin component [Thermomonospora curvata DSM 43183]
Length = 77
Score = 36.4 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 11 QDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
+ E G TA+EYGL+ +L + L + F + LN
Sbjct: 29 RGEEGVTAVEYGLMVALAVTIAAVAFGPLRDAVQNAFQAAADALN 73
>gi|172062956|ref|YP_001810607.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171995473|gb|ACB66391.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 59
Score = 36.4 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAI--IASVTTLGGKLTAVFADISSKLNP 56
+ VK+ L+DE G +++EY +LA +I VA+ + +V + L+++F I +K+N
Sbjct: 2 LQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTVLSGTSGLSSIFTTILNKVNS 57
>gi|148252687|ref|YP_001237272.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146404860|gb|ABQ33366.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 56
Score = 36.0 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
++ F +DESGATAIEYGL+A+ IA+AIIA + LG L +F +++KLN
Sbjct: 3 QLLLKFYEDESGATAIEYGLIAAGIALAIIAILNKLGLTLVGIFTTLTTKLN 54
>gi|315121894|ref|YP_004062383.1| hypothetical protein CKC_00720 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495296|gb|ADR51895.1| hypothetical protein CKC_00720 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 44
Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAI 32
MK I++NFLQD+S AT + YGL +LIAVA
Sbjct: 1 MKFDIIRNFLQDKSSAT-VRYGLFVALIAVAC 31
>gi|299532594|ref|ZP_07045983.1| hypothetical protein CTS44_17418 [Comamonas testosteroni S44]
gi|298719397|gb|EFI60365.1| hypothetical protein CTS44_17418 [Comamonas testosteroni S44]
Length = 67
Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 30/55 (54%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
H +++F++DE GA IEY L+ +++++ +I ++ A +S+ L
Sbjct: 10 HSLQSFVRDEEGAQIIEYALIVAVVSLTLILAMNVTDLGFAAWLGRVSACLTTAG 64
>gi|239814530|ref|YP_002943440.1| hypothetical protein Vapar_1523 [Variovorax paradoxus S110]
gi|239801107|gb|ACS18174.1| hypothetical protein Vapar_1523 [Variovorax paradoxus S110]
Length = 58
Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGK 42
+ K+FL DESGA +EY L+ ++I++ +I S+ L
Sbjct: 1 MFKSFLADESGAQMVEYALVIAVISILLITSLRPLVTD 38
>gi|163801330|ref|ZP_02195229.1| hypothetical protein 1103602000598_AND4_10694 [Vibrio sp. AND4]
gi|159174819|gb|EDP59619.1| hypothetical protein AND4_10694 [Vibrio sp. AND4]
Length = 64
Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAI--IASVTTLGGKLTAVFADISSKLNPKS 58
M+ +KNFL +E G TAIEY ++ ++ A+ I + L + ++ +++K+N
Sbjct: 1 MNALKNFLNNEDGITAIEYAIIGVAMSSALYYIFNEGGFIQSLESAWSTMTNKINQAG 58
>gi|21673276|ref|NP_661341.1| hypothetical protein CT0438 [Chlorobium tepidum TLS]
gi|21646365|gb|AAM71683.1| hypothetical protein CT0438 [Chlorobium tepidum TLS]
Length = 55
Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 10 LQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+ + G T IEY L+A+LI+ I +++ +G L + + + +
Sbjct: 5 INSQKGVTMIEYALIAALISTVTILALSQVGQNLVTLLVSVVNAFSSA 52
>gi|149185491|ref|ZP_01863807.1| hypothetical protein ED21_20739 [Erythrobacter sp. SD-21]
gi|148830711|gb|EDL49146.1| hypothetical protein ED21_20739 [Erythrobacter sp. SD-21]
Length = 63
Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAV 46
++ NFL+DESGA+A EY L+ +++ + +V T+ + V
Sbjct: 1 MLTNFLRDESGASAAEYALILAIVGAGLAFAVFTVSDAIERV 42
>gi|116748927|ref|YP_845614.1| hypothetical protein Sfum_1490 [Syntrophobacter fumaroxidans
MPOB]
gi|116697991|gb|ABK17179.1| hypothetical protein Sfum_1490 [Syntrophobacter fumaroxidans
MPOB]
Length = 71
Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
++ L +E G TAIEY L+ASLI +A +++ + +F ++ +
Sbjct: 16 LRILLCEERGTTAIEYALIASLIVLAAASAMVATSDSVINIFNYWTNAV 64
>gi|229816456|ref|ZP_04446757.1| hypothetical protein COLINT_03510 [Collinsella intestinalis DSM
13280]
gi|229807998|gb|EEP43799.1| hypothetical protein COLINT_03510 [Collinsella intestinalis DSM
13280]
Length = 99
Score = 35.6 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
V+ L++ESG EY +L ++ V I ++ K+++++ IS +N
Sbjct: 46 RPVRQILREESGQGTTEYAILVGVLVVIAILAIVAFRDKVSSLWEAISQGINS 98
>gi|163801333|ref|ZP_02195232.1| hypothetical protein 1103602000598_AND4_10709 [Vibrio sp. AND4]
gi|159174822|gb|EDP59622.1| hypothetical protein AND4_10709 [Vibrio sp. AND4]
Length = 64
Score = 35.6 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAI--IASVTTLGGKLTAVFADISSKLNPKS 58
M+++KNF +E G TAIEY ++ ++ A+ I + L ++ +++K+N
Sbjct: 1 MNVLKNFFNNEDGITAIEYAIIGVAMSSALYYIFNEGGFIQALETAWSTMTNKINQAG 58
>gi|299067804|emb|CBJ39015.1| putative pilin transmembrane protein [Ralstonia solanacearum
CMR15]
Length = 53
Score = 35.6 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 31/50 (62%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++ F+++E GA + EY LL + +A+ +IA L G + + ++ I++
Sbjct: 4 VIQRFIREEDGAASTEYALLVTFVALVMIAYGDALQGTVKSAWSQIAAAF 53
>gi|85372855|ref|YP_456917.1| hypothetical protein ELI_00140 [Erythrobacter litoralis HTCC2594]
gi|84785938|gb|ABC62120.1| hypothetical protein ELI_00140 [Erythrobacter litoralis HTCC2594]
Length = 54
Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 28/49 (57%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSK 53
+ + +D+SG+ A E+ L+AS+I++A + + LG + + + +
Sbjct: 1 MFRPLFRDQSGSPATEFALVASIISIAALGAFMALGEQSSNQMTKVETA 49
>gi|307245416|ref|ZP_07527504.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306853757|gb|EFM85974.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
Length = 77
Score = 35.6 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV 36
++ F +++ G TAIEYGL+A +A+ I+A
Sbjct: 17 IRRFKENQQGVTAIEYGLIAVAVAILIVAVF 47
>gi|261867458|ref|YP_003255380.1| hypothetical protein D11S_0764 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|4887567|dbj|BAA77795.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887569|dbj|BAA77796.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887571|dbj|BAA77797.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887573|dbj|BAA77798.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887575|dbj|BAA77799.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887577|dbj|BAA77800.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|15487343|dbj|BAB64543.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487353|dbj|BAB64548.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487359|dbj|BAB64551.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702510|gb|AAL93275.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702528|gb|AAL93284.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702530|gb|AAL93285.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702532|gb|AAL93286.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702536|gb|AAL93288.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702546|gb|AAL93293.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|261412790|gb|ACX82161.1| hypothetical protein D11S_0764 [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 76
Score = 35.6 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV---TTLGGKLTAVFADISSKLNPK 57
+++F ++++G TAIEYGL+A +AV I+A L + F +++ +N
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLANTVNSA 71
>gi|218887830|ref|YP_002437151.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758784|gb|ACL09683.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 35.6 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 39/56 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ + +++E GATA+EYGL+A+LIA I+A+VT LG K+++ F+ I SK+
Sbjct: 2 LKSITALIREEEGATALEYGLIAALIAAVIVAAVTALGTKVSSTFSYIDSKMPTPG 57
>gi|4887593|dbj|BAA77808.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
Length = 75
Score = 35.6 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV---TTLGGKLTAVFADISSKLNPK 57
+++F ++++G TAIEYGL+A +AV I+A L + F +++ +N
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLANTVNSA 71
>gi|330811042|ref|YP_004355504.1| hypothetical protein PSEBR_a4096 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327379150|gb|AEA70500.1| Hypothetical protein PSEBR_a4096 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 73
Score = 35.6 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 1 MKMHIVK----NFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
M + +K F +DE G T +EY + LI VA+ A LG + + + +
Sbjct: 11 MTLQTIKASVLKFAKDEDGLTIVEYAVAGGLITVAVAAMFVLLGSAVNTRITALCAAVKG 70
Query: 57 KS 58
+
Sbjct: 71 SA 72
>gi|37680197|ref|NP_934806.1| hypothetical protein VV2013 [Vibrio vulnificus YJ016]
gi|326423985|ref|YP_004300167.1| hypothetical protein VV1_3224 [Vibrio vulnificus CMCP6]
gi|37198944|dbj|BAC94777.1| hypothetical protein [Vibrio vulnificus YJ016]
gi|319999364|gb|ADV91938.1| hypothetical protein VV1_3224 [Vibrio vulnificus CMCP6]
Length = 77
Score = 35.6 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 5 IVKNFLQDESGATAIEYGL---LASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
++K F+ DESGATAIEYG+ + +AI S L F I + LNP
Sbjct: 20 MLKQFINDESGATAIEYGILAAGLAAGVLAIFGSDGVFISALKEKFLGIVNSLNPAG 76
>gi|323495734|ref|ZP_08100804.1| hypothetical protein VISI1226_05039 [Vibrio sinaloensis DSM
21326]
gi|323319201|gb|EGA72142.1| hypothetical protein VISI1226_05039 [Vibrio sinaloensis DSM
21326]
Length = 85
Score = 35.3 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
+ F D+ G TAIEY ++ +I+ A++ +V L F+ S ++
Sbjct: 27 LHAFFADQRGVTAIEYAIIGVIIS-AMVLAVFVTDNDLQTAFSGAMSAISS 76
>gi|225182002|ref|ZP_03735434.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225167287|gb|EEG76106.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 57
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 29/55 (52%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
M ++ +++ESG EY L+ + +A+A++ + + + +F + +P+
Sbjct: 1 MAMLMALIREESGQGMTEYALILAFVALAVVLVLGQMAEPIVDMFHRTIAAFDPE 55
>gi|42524669|ref|NP_970049.1| hypothetical protein Bd3297 [Bdellovibrio bacteriovorus HD100]
gi|39576879|emb|CAE78108.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio
bacteriovorus HD100]
Length = 89
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
MK + ++++ G +EY ++ +++AV I+ + +G + FA+++ L
Sbjct: 1 MKAQTI---IKNKKGQGLVEYLIIVAIVAVGSISVIKVVGANIDVQFANVAQALG 52
>gi|41352064|gb|AAS00698.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 35.3 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV---TTLGGKLTAVFADISSKLNPKS 58
+++F ++++G TAIEYGL+A +AV I+A L F D++ ++ S
Sbjct: 17 IRSFKKNQAGVTAIEYGLIAIAVAVLIVAVFYSDNGFIKGLQNKFNDLTKTVSSAS 72
>gi|209515948|ref|ZP_03264809.1| Flp/Fap pilin component [Burkholderia sp. H160]
gi|209503606|gb|EEA03601.1| Flp/Fap pilin component [Burkholderia sp. H160]
Length = 62
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG---GKLTAVFADISSKLN 55
+ +K+ +DE G +A+EY +LA ++ +A++A+ + G G L A+F ++ +K+
Sbjct: 2 LQFIKSLSRDERGVSALEYAVLAGIVVIAVVAAGSIFGSTTGGLPALFQNMITKVT 57
>gi|319942845|ref|ZP_08017141.1| flp/Fap pilin component [Sutterella wadsworthensis 3_1_45B]
gi|319803548|gb|EFW00525.1| flp/Fap pilin component [Sutterella wadsworthensis 3_1_45B]
Length = 68
Score = 35.3 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVA---IIASVTTLGGKLTAVFADISSKLNPKS 58
++ F DESG TAIEYG+LA+ +A A I +S L F I+ ++
Sbjct: 5 QSLRKFAADESGVTAIEYGILAAAMAAAVGYIFSSDGAFISALRDKFQQIADDISGAG 62
>gi|3097295|dbj|BAA25886.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|4887579|dbj|BAA77801.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887581|dbj|BAA77802.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887583|dbj|BAA77803.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887585|dbj|BAA77804.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887587|dbj|BAA77805.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887589|dbj|BAA77806.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887591|dbj|BAA77807.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|15487351|dbj|BAB64547.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487357|dbj|BAB64550.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487361|dbj|BAB64552.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702516|gb|AAL93278.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|41352082|gb|AAS00710.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV---TTLGGKLTAVFADISSKLNPK 57
+++F ++++G TAIEYGL+A +AV I+A L + F ++S +N
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLASTVNSA 71
>gi|15487347|dbj|BAB64545.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702504|gb|AAL93272.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702506|gb|AAL93273.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702524|gb|AAL93282.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702526|gb|AAL93283.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702538|gb|AAL93289.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702540|gb|AAL93290.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702542|gb|AAL93291.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702544|gb|AAL93292.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|41352067|gb|AAS00700.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352073|gb|AAS00704.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352076|gb|AAS00706.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352079|gb|AAS00708.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 76
Score = 35.3 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV---TTLGGKLTAVFADISSKLNPK 57
+++F ++++G TAIEYGL+A +AV I+A L F ++S +
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQNKFNSLASTVGSA 71
>gi|317489757|ref|ZP_07948256.1| hypothetical protein HMPREF1023_01955 [Eggerthella sp. 1_3_56FAA]
gi|316911103|gb|EFV32713.1| hypothetical protein HMPREF1023_01955 [Eggerthella sp. 1_3_56FAA]
Length = 66
Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
V+ L E G EY +L ++ V I ++T KL ++ I+ +N
Sbjct: 15 VRRVLAREDGQGTTEYAILVGVLVVIAIIAITVFRPKLQELWDAIAEGIN 64
>gi|315181064|gb|ADT87978.1| hypothetical fimbrial protein [Vibrio furnissii NCTC 11218]
Length = 55
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADIS 51
+VK F QDE G T +EY + A L+ + G L + IS
Sbjct: 6 KVVKEFWQDEEGLTVVEYVVGAGLLVAGLATIFDQWGATLQSELTSIS 53
>gi|154244240|ref|YP_001415198.1| Flp/Fap pilin component [Xanthobacter autotrophicus Py2]
gi|154158325|gb|ABS65541.1| Flp/Fap pilin component [Xanthobacter autotrophicus Py2]
Length = 54
Score = 34.9 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 26/35 (74%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTL 39
+ F+++E G+TA+EYGL+A+ +++AI+ + +
Sbjct: 4 LFWRFIREEEGSTALEYGLIAAGLSIAIVTVLVQI 38
>gi|295690801|ref|YP_003594494.1| hypothetical protein Cseg_3444 [Caulobacter segnis ATCC 21756]
gi|295432704|gb|ADG11876.1| hypothetical protein Cseg_3444 [Caulobacter segnis ATCC 21756]
Length = 56
Score = 34.9 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG 40
H++K F +DESG I+YGL ++IAV VT LG
Sbjct: 3 HLIKAFAKDESGVAGIQYGLFVAVIAVITTVCVTGLG 39
>gi|294012242|ref|YP_003545702.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
gi|292675572|dbj|BAI97090.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
Length = 62
Score = 34.9 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 26/52 (50%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
+K+ D+SGA+A EY L+ +++ I + LG ++ + + +
Sbjct: 1 MKSLWADQSGASAAEYALILAIVGTGIALAAVGLGQSISTAMNEAGNCIKSP 52
>gi|307261009|ref|ZP_07542691.1| hypothetical protein appser12_5760 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306869311|gb|EFN01106.1| hypothetical protein appser12_5760 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 78
Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV 36
++ F +++ G TAIEYGL+A +A+ I+A
Sbjct: 17 IRRFKENQQGVTAIEYGLIAVAVAILIVAVF 47
>gi|2339967|dbj|BAA21831.1| fimbrial protein [Actinobacillus actinomycetemcomitans]
gi|19702502|gb|AAL93271.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 34.9 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV---TTLGGKLTAVFADISSKLNPK 57
+++F ++++G TAIEYGL+A +AV I+A L + F ++S +N
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIASLQSKFNSLASTVNSA 71
>gi|119773839|ref|YP_926579.1| hypothetical protein Sama_0701 [Shewanella amazonensis SB2B]
gi|119766339|gb|ABL98909.1| hypothetical protein Sama_0701 [Shewanella amazonensis SB2B]
Length = 104
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 11 QDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
Q ++G + +EY L+ +L+A+A I + + G L A IS++L+
Sbjct: 3 QAQTGMSTVEYVLVLALVAIAAIGAFSFFGKTLRNQAAGISTELS 47
>gi|139439661|ref|ZP_01773074.1| Hypothetical protein COLAER_02101 [Collinsella aerofaciens ATCC
25986]
gi|133775002|gb|EBA38822.1| Hypothetical protein COLAER_02101 [Collinsella aerofaciens ATCC
25986]
Length = 317
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 14 SGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
G + IEY L+ ++I + I+ + + G + F + + +N
Sbjct: 19 RGQSIIEYVLIIAIIGLVIVFAGPGVAGAIRNQFNLVGNTVN 60
>gi|114704315|ref|ZP_01437223.1| hypothetical protein FP2506_05261 [Fulvimarina pelagi HTCC2506]
gi|114539100|gb|EAU42220.1| hypothetical protein FP2506_05261 [Fulvimarina pelagi HTCC2506]
Length = 66
Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTL 39
+ + L D+SGATAIEY L+A +IA AI+ + L
Sbjct: 11 LRRLATALNDDSGATAIEYCLIAGIIATAIVTGLEAL 47
>gi|86147471|ref|ZP_01065783.1| hypothetical protein MED222_21494 [Vibrio sp. MED222]
gi|85834764|gb|EAQ52910.1| hypothetical protein MED222_21494 [Vibrio sp. MED222]
Length = 62
Score = 34.9 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 31/56 (55%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ +K F+ DE G T IEY + A+++ + + + +G L+A + I + ++ +
Sbjct: 5 LKNIKEFMNDEEGLTVIEYVIGAAMLVLGLTTIFSGIGNVLSAKLSAIVNAISTTT 60
>gi|330811041|ref|YP_004355503.1| hypothetical protein PSEBR_a4095 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327379149|gb|AEA70499.1| Hypothetical protein PSEBR_a4095 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 63
Score = 34.5 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ F+ DE G T +EY + LI VA+ A LGG + + + + +
Sbjct: 10 IVKFIDDEDGLTIVEYAVAGGLITVAVAAMFVLLGGAVNDRITALCAAVKGSA 62
>gi|149188849|ref|ZP_01867139.1| hypothetical protein VSAK1_05850 [Vibrio shilonii AK1]
gi|148837269|gb|EDL54216.1| hypothetical protein VSAK1_05850 [Vibrio shilonii AK1]
Length = 74
Score = 34.5 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAV----AIIASVTTLGGKLTAVFADISSKLNPKS 58
+ + DE G TAIEYGL+A +AV ++ + G+L FA IS +N +
Sbjct: 10 LSFLTTLKNDERGVTAIEYGLIAVAMAVLLSAVLVFGEGNMLGELQQAFAAISGDINTTT 69
>gi|78357400|ref|YP_388849.1| pilin [Desulfovibrio desulfuricans subsp. desulfuricans str. G20]
gi|78219805|gb|ABB39154.1| pilin, putative [Desulfovibrio desulfuricans subsp. desulfuricans
str. G20]
Length = 58
Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ N L+ E GATA+EYGL+A+LIA I+A+VT LG K++ F I SK+
Sbjct: 3 KTIMNLLKGEEGATALEYGLIAALIAAVIVAAVTALGTKVSDTFTYIDSKMPTPG 57
>gi|292491515|ref|YP_003526954.1| hypothetical protein Nhal_1416 [Nitrosococcus halophilus Nc4]
gi|291580110|gb|ADE14567.1| hypothetical protein Nhal_1416 [Nitrosococcus halophilus Nc4]
Length = 62
Score = 34.5 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+++FL+DE G T EY + LI V A LGG++ V ++++L
Sbjct: 8 IRSFLRDEEGLTMTEYAVAGGLIVVGGAAVFMALGGEIERVIGLVNAEL 56
>gi|28900574|ref|NP_800229.1| hypothetical protein VPA0719 [Vibrio parahaemolyticus RIMD
2210633]
gi|28808954|dbj|BAC62062.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
Length = 94
Score = 34.5 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASV--TTLGGKLTAVFADISSKLNPK 57
+I F D+ G TA+EY ++A ++ I+ TL L IS+ ++
Sbjct: 21 NIRNKFKSDKRGVTAVEYAIIAVAMSSIILFVFKDGTLKTTLNDAMGKISTSMDSA 76
>gi|115358168|ref|YP_775306.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115283456|gb|ABI88972.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 59
Score = 34.5 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGK--LTAVFADISSKLNP 56
+ VK+ L+DE G +++EY +LA +I VA+ A T L G L A+F + +K++
Sbjct: 2 LQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTYLSGTSGLQAIFTSLINKVSS 57
>gi|170703400|ref|ZP_02894177.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|171317756|ref|ZP_02906938.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
gi|170131689|gb|EDT00240.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|171097106|gb|EDT41959.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
Length = 59
Score = 34.5 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG--GKLTAVFADISSKLNP 56
+ VK+ L+DE G +++EY +LA +I VA+ A T L L A+F + +K+
Sbjct: 2 LQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTYLSGTTGLQAIFTQLVNKVTS 57
>gi|85711962|ref|ZP_01043016.1| Flp/Fap pilin-like protein [Idiomarina baltica OS145]
gi|85694148|gb|EAQ32092.1| Flp/Fap pilin-like protein [Idiomarina baltica OS145]
Length = 96
Score = 34.5 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ + + + G EY ++ +LIAVA I + G L A ++ ++ +S
Sbjct: 3 QFNHLTRTHHRQHGQGMTEYIIIVALIAVAAIGVYSMFGQSLRNQVAGLAKEMTGQS 59
>gi|262275471|ref|ZP_06053281.1| hypothetical protein VHA_002453 [Grimontia hollisae CIP 101886]
gi|262220716|gb|EEY72031.1| hypothetical protein VHA_002453 [Grimontia hollisae CIP 101886]
Length = 65
Score = 34.5 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 7 KNFLQDESGATAIEYGLLASLIA---VAIIASVTTLGGKLTAVFADISSKLNPK 57
K F++DE G TAIEY ++ I+ +A+ A L LT + IS +N
Sbjct: 11 KCFIRDERGVTAIEYAIIGVAISALVLALFAGGGDLETALTNAISLISGNINSA 64
>gi|255599435|ref|XP_002537230.1| conserved hypothetical protein [Ricinus communis]
gi|223517051|gb|EEF25153.1| conserved hypothetical protein [Ricinus communis]
Length = 96
Score = 34.5 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
VK FL+DE G T +EY + L+ A + + TTLGG + + + +
Sbjct: 42 VKAFLKDEEGLTMVEYAVAGGLVTAAAVTAFTTLGGAIVTRINTLITAMG 91
>gi|330959993|gb|EGH60253.1| hypothetical protein PMA4326_15659 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 62
Score = 34.5 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ FL+D A+ IEY L+A+++AVAI+A V T+ K+T +F IS+ L
Sbjct: 14 ISCFLKDREAASGIEYALIAAMVAVAIVAFVPTISTKITTMFTTISNAL 62
>gi|17545377|ref|NP_518779.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427669|emb|CAD14188.1| putative pilin transmembrane protein [Ralstonia solanacearum
GMI1000]
Length = 53
Score = 34.1 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 31/50 (62%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+V+ F+++E GA + EY LL + +A+ ++A L G + + ++ I++
Sbjct: 4 VVQRFIRNEDGAASTEYALLVTFVALVMLAYGDALQGTVKSAWSQIAAAF 53
>gi|149911415|ref|ZP_01900033.1| hypothetical protein PE36_11232 [Moritella sp. PE36]
gi|149805523|gb|EDM65528.1| hypothetical protein PE36_11232 [Moritella sp. PE36]
Length = 63
Score = 34.1 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 30/54 (55%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+++F++DESG TA+EY + L+ ++ + LG T + + + ++ +
Sbjct: 7 FIQDFIKDESGLTAVEYAIAGGLVVGGMVVAFGELGTAATNQISALCTAVDAAA 60
>gi|320160320|ref|YP_004173544.1| hypothetical protein ANT_09100 [Anaerolinea thermophila UNI-1]
gi|319994173|dbj|BAJ62944.1| hypothetical protein ANT_09100 [Anaerolinea thermophila UNI-1]
Length = 279
Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 11 QDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ E G +EY L+ L+A ++ G L V+ + + L+ K+
Sbjct: 6 RREKGQGLLEYALIILLVAAVTGLALAVSGVSLRDVYERMLNALSGKT 53
>gi|327538084|gb|EGF24774.1| hypothetical protein RBWH47_03141 [Rhodopirellula baltica WH47]
Length = 151
Score = 34.1 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 29/53 (54%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
K + ++ +++ G +EYGL+ + +A+ A+++ G K + + ++ L
Sbjct: 33 KENKMRKLFKNKKGQGLVEYGLIIAGVALICAAAISVFGHKTSDLIGATAAIL 85
>gi|260776720|ref|ZP_05885615.1| hypothetical protein VIC_002106 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607943|gb|EEX34208.1| hypothetical protein VIC_002106 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 54
Score = 34.1 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADI 50
+K FL+DE G T +EY + A LI + TT L +
Sbjct: 8 IKAFLKDEEGLTVVEYVVGAGLIVAGLTGIFTTFSSTLETQLTGV 52
>gi|114568965|ref|YP_755645.1| TadE family protein [Maricaulis maris MCS10]
gi|114339427|gb|ABI64707.1| TadE family protein [Maricaulis maris MCS10]
Length = 185
Score = 34.1 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 6 VKNFLQDESGATAIEYGLLAS-----LIAVAIIASVTTLGGKLTAV 46
+ F++ SGATA+E+ ++ + L A+ IA+V G L
Sbjct: 17 IARFVRARSGATAVEFAMIGAPFFLLLFAMIEIAAVFFTGTVLENA 62
>gi|90412179|ref|ZP_01220185.1| hypothetical protein P3TCK_27819 [Photobacterium profundum 3TCK]
gi|90326903|gb|EAS43288.1| hypothetical protein P3TCK_27819 [Photobacterium profundum 3TCK]
Length = 68
Score = 34.1 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGG---KLTAVFADISSKLNP 56
M + + DE G TAIEYGL+A +AV + A +T G LT FA I+++L
Sbjct: 8 TMAFLYTYKNDERGVTAIEYGLIAVAMAVLLGAVFSTQGSLIQALTKGFALITAELTK 65
>gi|260914315|ref|ZP_05920784.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260631416|gb|EEX49598.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 73
Score = 33.7 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV---TTLGGKLTAVFADISS 52
K F G T+IEYGL+A+++A+ I++ + L + F +SS
Sbjct: 15 FKYFFSQCKGITSIEYGLIAAIVAIFIVSVLYGDNALVEAIKGKFELLSS 64
>gi|87310843|ref|ZP_01092969.1| glucosamine-6-phosphate deaminase [Blastopirellula marina DSM
3645]
gi|87286358|gb|EAQ78266.1| glucosamine-6-phosphate deaminase [Blastopirellula marina DSM
3645]
Length = 62
Score = 33.7 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
M + +FL E G TA+EY ++ + + V + ++ +G ++ A + + +
Sbjct: 1 MSHLIHFLLSEDGPTAVEYAVMLAFL-VICLTAIGIMGTQVGAGYQHATDEFT 52
>gi|260365454|ref|ZP_05777991.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus K5030]
gi|260877519|ref|ZP_05889874.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AN-5034]
gi|260897540|ref|ZP_05906036.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus
Peru-466]
gi|260901742|ref|ZP_05910137.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AQ4037]
gi|308087109|gb|EFO36804.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus
Peru-466]
gi|308090614|gb|EFO40309.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AN-5034]
gi|308108863|gb|EFO46403.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AQ4037]
gi|308114354|gb|EFO51894.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus K5030]
Length = 84
Score = 33.7 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASV--TTLGGKLTAVFADISSKLNPK 57
+I F D+ G TA+EY ++A ++ I+ TL L IS+ ++
Sbjct: 11 NIRNKFKSDKRGVTAVEYAIIAVAMSSIILFVFKDGTLKTTLNDAMGKISTSMDSA 66
>gi|90418064|ref|ZP_01225976.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337736|gb|EAS51387.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 202
Score = 33.7 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 7 KNFLQDESGATAIEYGLLASLIAVAIIASVTTL 39
K+F +D SGATA+E+ ++A+ + + I A V T
Sbjct: 28 KSFGRDTSGATAVEFAMVAAPLFMLIFAIVETF 60
>gi|227114873|ref|ZP_03828529.1| hypothetical protein PcarbP_18010 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
gi|253687065|ref|YP_003016255.1| Flp/Fap pilin component [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251753643|gb|ACT11719.1| Flp/Fap pilin component [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 73
Score = 33.7 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG---GKLTAVFADISSKL 54
MK +++FL+DESG TAIEYG+LA+ +A AI A G L F+ I+ ++
Sbjct: 4 MKAK-LRSFLRDESGVTAIEYGILAAAMAAAIGAIFGGDGIFVKALNEKFSQIADQI 59
>gi|269105130|ref|ZP_06157824.1| fimbrial protein precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|312621077|ref|YP_003993805.1| flp pilus assembly protein, pilin flp [Photobacterium damselae
subsp. damselae]
gi|268160580|gb|EEZ39079.1| fimbrial protein precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|311872798|emb|CBX86889.1| Flp pilus assembly protein, pilin Flp [Photobacterium damselae
subsp. damselae]
Length = 69
Score = 33.7 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVT----TLGGKLTAVFADISSKLNPK 57
++NF +DE G TAIEY ++ ++ ++A +L L+ I+ +
Sbjct: 9 LQNFFKDERGVTAIEYAIIGVAVSAIVLAVFAGDANSLKTALSGAVTTITDNITSA 64
>gi|59711117|ref|YP_203893.1| fimbrial protein precursor [Vibrio fischeri ES114]
gi|59479218|gb|AAW85005.1| fimbrial protein precursor [Vibrio fischeri ES114]
Length = 71
Score = 33.7 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV-TTLGGKLTAVFADISSKLNPK 57
+++F DE G TAIEY ++ ++ ++A TL L IS+ +
Sbjct: 13 LQSFKNDERGVTAIEYAIIGVCMSAIVLAVFNGTLQEALQGAMDTISTNITAA 65
>gi|264678235|ref|YP_003278142.1| hypothetical protein CtCNB1_2100 [Comamonas testosteroni CNB-2]
gi|262208748|gb|ACY32846.1| hypothetical protein CtCNB1_2100 [Comamonas testosteroni CNB-2]
Length = 69
Score = 33.7 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASV-TTLGGKLTAVF-ADISSKLNPKS 58
H ++ F+QDE GA IEY L+ +++++ +I + +++G L + + L +
Sbjct: 10 HSLQAFIQDEEGAQIIEYALVVAVVSIGLILLMKSSIGNTLFNDWLTKVKDCLTNAA 66
>gi|77462456|ref|YP_351960.1| hypothetical protein RSP_6025 [Rhodobacter sphaeroides 2.4.1]
gi|77386874|gb|ABA78059.1| hypothetical protein RSP_6025 [Rhodobacter sphaeroides 2.4.1]
Length = 105
Score = 33.7 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
++I K F DE GA +++ +L + I I V + G LT + L+
Sbjct: 33 LNIFKTFRNDEDGAVTVDWVVLTAAIVGLGILVVGAVSGGLTNAANTLVEDLDA 86
>gi|12642644|gb|AAK00326.1|AF320002_1 Flp-1 [Aggregatibacter actinomycetemcomitans]
gi|19702492|gb|AAL93266.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702494|gb|AAL93267.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702496|gb|AAL93268.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702500|gb|AAL93270.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|26000708|gb|AAN75204.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352070|gb|AAS00702.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|307548783|dbj|BAJ19105.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 33.7 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV---TTLGGKLTAVFADISSKLNPK 57
+++F ++++G TAIEYGL+A +AV I+A L + F ++S +
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLASTVASA 71
>gi|302391024|ref|YP_003826844.1| Flp/Fap pilin component [Acetohalobium arabaticum DSM 5501]
gi|302203101|gb|ADL11779.1| Flp/Fap pilin component [Acetohalobium arabaticum DSM 5501]
Length = 62
Score = 33.7 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 37/49 (75%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADIS 51
++I+K L +E G +EYGL+ +LIAVA++A++TT+G LT +F +I+
Sbjct: 2 LNILKRLLTEEDGQGMVEYGLILALIAVAVVAALTTMGEDLTTLFENIT 50
>gi|227326299|ref|ZP_03830323.1| hypothetical protein PcarcW_02889 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 73
Score = 33.7 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLG---GKLTAVFADISSKL 54
MK +++FL+DESG TAIEYG+LA+ +A AI A G L F I+ ++
Sbjct: 4 MKAK-LRSFLRDESGVTAIEYGILAAAMAAAIGAIFGGDGIFVKALNEKFTQIADQI 59
>gi|323486498|ref|ZP_08091821.1| hypothetical protein HMPREF9474_03572 [Clostridium symbiosum
WAL-14163]
gi|323694361|ref|ZP_08108534.1| hypothetical protein HMPREF9475_03398 [Clostridium symbiosum
WAL-14673]
gi|323400201|gb|EGA92576.1| hypothetical protein HMPREF9474_03572 [Clostridium symbiosum
WAL-14163]
gi|323501601|gb|EGB17490.1| hypothetical protein HMPREF9475_03398 [Clostridium symbiosum
WAL-14673]
Length = 59
Score = 33.7 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
+ F DE G T IE LI V +I V ++ + +I ++N KS
Sbjct: 7 IIAFWNDEEGVTVIE----IVLILVVVIGLVLIFKSQINTLLNNIFKQINSKS 55
>gi|328470516|gb|EGF41427.1| hypothetical protein VP10329_06947 [Vibrio parahaemolyticus
10329]
Length = 84
Score = 33.7 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASV--TTLGGKLTAVFADISSKLN 55
+I F D+ G TA+EY ++A ++ I+ TL L IS+ ++
Sbjct: 11 NIRNKFKSDKRGVTAVEYAIIAVAMSSIILFVFKDGTLKTTLNDAMGKISTSMD 64
>gi|327189765|gb|EGE56909.1| hypothetical protein RHECNPAF_550032 [Rhizobium etli CNPAF512]
Length = 64
Score = 33.7 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
++ V+ F ++E G EY +L +L+ +I +V G L AV+ +
Sbjct: 5 VNSVRAFAREEDGVALTEYLILLALLVGGVITAVGLAGTNLAAVWTAWAGWFTTA 59
>gi|307294421|ref|ZP_07574265.1| Flp pilus assembly protein pilin Flp [Sphingobium
chlorophenolicum L-1]
gi|306880572|gb|EFN11789.1| Flp pilus assembly protein pilin Flp [Sphingobium
chlorophenolicum L-1]
Length = 59
Score = 33.7 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
M +K+ D+SGA+A EY L+ +++ I + LGG ++ + +
Sbjct: 1 MTFLKSLWADDSGASAAEYALILAIVGTGIALAAFQLGGAISGSMNKAKNCI 52
>gi|222149924|ref|YP_002550881.1| fimbriae associated protein [Agrobacterium vitis S4]
gi|221736906|gb|ACM37869.1| fimbriae associated protein [Agrobacterium vitis S4]
Length = 62
Score = 33.7 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
+ + S ATAIEY L+A +IAV + ++ L +F I + +
Sbjct: 11 LSAIFRQTSAATAIEYSLIAGIIAVTLYLALGVYYEALDRLFDSIIAAI 59
>gi|33152389|ref|NP_873742.1| flp operon protein Flp3 [Haemophilus ducreyi 35000HP]
gi|21326704|gb|AAL92464.1| Flp3 [Haemophilus ducreyi]
gi|33148612|gb|AAP96131.1| flp operon protein Flp3 [Haemophilus ducreyi 35000HP]
Length = 89
Score = 33.7 bits (76), Expect = 9.4, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV 36
F ++ G TAIEYGL+A +A+ IIA
Sbjct: 21 FNCFKINQKGVTAIEYGLIAVAVAILIIAVF 51
>gi|19702534|gb|AAL93287.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
Length = 76
Score = 33.7 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASV---TTLGGKLTAVFADISSKLNPK 57
+++F ++++G TAIEYGL+A +AV I+A L + F +++ +N
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFISLANTVNSA 71
>gi|330987577|gb|EGH85680.1| pilin protein [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 68
Score = 33.7 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 6 VKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL 54
VK+F++D A+ IEY L+A+++AVAI+A V T+ G++TA+F I + L
Sbjct: 20 VKSFIKDREAASGIEYALIAAMVAVAIVAFVPTISGRITAMFTTIQNAL 68
>gi|24114272|ref|NP_708782.1| hypothetical protein SF3008 [Shigella flexneri 2a str. 301]
gi|30064321|ref|NP_838492.1| hypothetical protein S3211 [Shigella flexneri 2a str. 2457T]
gi|24053426|gb|AAN44489.1| orf, conserved hypothetical protein [Shigella flexneri 2a str.
301]
gi|30042578|gb|AAP18302.1| hypothetical protein S3211 [Shigella flexneri 2a str. 2457T]
gi|281602358|gb|ADA75342.1| hypothetical protein SFxv_3304 [Shigella flexneri 2002017]
gi|313648077|gb|EFS12523.1| flp/Fap pilin component family protein [Shigella flexneri 2a str.
2457T]
gi|332752633|gb|EGJ83018.1| flp/Fap pilin component family protein [Shigella flexneri K-671]
gi|332753020|gb|EGJ83404.1| flp/Fap pilin component family protein [Shigella flexneri
4343-70]
gi|332754597|gb|EGJ84963.1| flp/Fap pilin component family protein [Shigella flexneri
2747-71]
gi|332998907|gb|EGK18498.1| flp/Fap pilin component family protein [Shigella flexneri VA-6]
gi|332999968|gb|EGK19551.1| flp/Fap pilin component family protein [Shigella flexneri K-218]
gi|333014810|gb|EGK34155.1| flp/Fap pilin component family protein [Shigella flexneri K-304]
Length = 79
Score = 33.3 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Query: 4 HIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVF 47
F +DE G TAIEY +LI VA+ + + G + F
Sbjct: 14 QCFARFAKDERGVTAIEY----ALIGVAMATLLAFIFGDQNSGF 53
>gi|163745849|ref|ZP_02153208.1| hypothetical protein OIHEL45_09693 [Oceanibulbus indolifex
HEL-45]
gi|161380594|gb|EDQ05004.1| hypothetical protein OIHEL45_09693 [Oceanibulbus indolifex
HEL-45]
Length = 59
Score = 33.3 bits (75), Expect = 9.9, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 29/55 (52%)
Query: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPK 57
M+ +KNF DE GA +++ +L + I I + +T+G + I+ ++ +
Sbjct: 1 MNFIKNFRNDEDGAVTVDWVVLTAAIVGLAIVAFSTIGENTELLTGQIAGDISGE 55
>gi|154252186|ref|YP_001413010.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154156136|gb|ABS63353.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 53
Score = 33.3 bits (75), Expect = 10.0, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 5 IVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLT-AVFADISSKLN 55
++K F DE+GATA+EYGL+ + ++V + A+V T+G + A++ + + L+
Sbjct: 1 MLKKFWADENGATAVEYGLILAALSVVVGAAVATVGETIDEALYGKVIAALS 52
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.315 0.150 0.394
Lambda K H
0.267 0.0459 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 922,790,151
Number of Sequences: 14124377
Number of extensions: 24347984
Number of successful extensions: 127861
Number of sequences better than 10.0: 854
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 126445
Number of HSP's gapped (non-prelim): 1461
length of query: 58
length of database: 4,842,793,630
effective HSP length: 31
effective length of query: 27
effective length of database: 4,404,937,943
effective search space: 118933324461
effective search space used: 118933324461
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 76 (33.7 bits)