RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= gi|254780733|ref|YP_003065146.1| hypothetical protein
CLIBASIA_03100 [Candidatus Liberibacter asiaticus str. psy62]
         (56 letters)



>3bcy_A Protein YER067W; mixed alpha-helix/beta-sheet fold, UBL
          conjugation, unknown function; 1.70A {Saccharomyces
          cerevisiae} (A:)
          Length = 155

 Score = 26.3 bits (58), Expect = 1.7
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 32 IIASVTTLGGKLSKVFEDIE 51
          ++ +VTT  G+  KVFED++
Sbjct: 4  MVQTVTTEDGETVKVFEDLQ 23


>2wbi_A Acyl-COA dehydrogenase family member 11; human,
           polymorphism, phosphoprotein, oxidoreductase,
           alternative splicing; HET: FAD; 2.80A {Homo sapiens}
           (A:1-111,A:264-428)
          Length = 276

 Score = 25.4 bits (55), Expect = 2.9
 Identities = 8/26 (30%), Positives = 12/26 (46%)

Query: 9   FLKDESGATAIEYGLLASLIAVAIIA 34
           FL   SG + ++Y L+A        A
Sbjct: 85  FLPAVSGLSHVDYALIAEETGKCFFA 110


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.317    0.135    0.344 

Gapped
Lambda     K      H
   0.267   0.0630    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 359,964
Number of extensions: 10041
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 2
Length of query: 56
Length of database: 4,956,049
Length adjustment: 26
Effective length of query: 30
Effective length of database: 4,077,119
Effective search space: 122313570
Effective search space used: 122313570
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.2 bits)