HHsearch alignment for GI: 254780734 and conserved domain: pfam04964
>pfam04964 Flp_Fap Flp/Fap pilin component.
Probab=99.73 E-value=3e-18 Score=113.85 Aligned_cols=47 Identities=66% Similarity=0.940 Sum_probs=45.4
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 96123683199999999999999999999974489999999996315
Q gi|254780734|r 9 FLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55 (62)
Q Consensus 9 fl~De~GaTAIEYgLIaaLIav~ii~av~~lG~~l~~~f~~v~~~l~ 55 (62)
T Consensus 1 F~kde~GaTAIEYgLIaalIav~iI~~~~~~g~~l~~~f~~i~~~l~ 47 (47)
T pfam04964 1 FLKDESGATAIEYGLIAALIAVVIIAYVTTLGTALKTKFTSIGTALT 47 (47)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 96565641599999999999999999999970129889999886239