HHsearch alignment for GI: 254780741 and conserved domain: COG0019
>COG0019 LysA Diaminopimelate decarboxylase [Amino acid transport and metabolism].
Probab=100.00 E-value=0 Score=603.69 Aligned_cols=344 Identities=27% Similarity=0.358 Sum_probs=307.2
Q ss_pred CCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCEEEEECHHHHHHHHC-CCCCCCEEEC-C
Q ss_conf 8885689779999999999999853369869995410599999999985187489807999989873-6880108853-7
Q gi|254780741|r 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYN-V 79 (367)
Q Consensus 2 i~TP~yv~d~~~i~~n~~~~~~~~~~~~~~i~yA~KaN~~~~il~~l~~~g~g~dv~S~~E~~la~~-g~~~~~i~~~-~ 79 (367)
T Consensus 25 ~gTP~yvyd~~~l~~~~~~~~~a~~~~~~~i~yAvKAn~~~~il~~l~~~g~g~Dv~S~gEl~~al~aG~~~~~I~f~g~ 104 (394)
T COG0019 25 FGTPVYVYDEATLRRNARELKSAFPGSGAKVFYAVKANSNPAILRLLAEEGSGFDVASLGELELALAAGFPPERIVFSGP 104 (394)
T ss_pred CCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEECCHHHHHHHHHCCCCHHEEEECCC
T ss_conf 69988998479999999999986156781599997468987999999973888653489999999983999220999189
Q ss_pred CCCHHHHHHHHCCCCE-EEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH---H---
Q ss_conf 7780347886138868-98567205999999861234561489963577443101245578643574278888---7---
Q gi|254780741|r 80 AYKDCEIDAVLSNCDT-IIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI---E--- 152 (367)
Q Consensus 80 ~~~~~el~~a~~~~~~-i~iDs~~El~~i~~~a~~~~~~I~lRinP~~~~~~~~~~~~~~~~skfG~~~~~~~---~--- 152 (367)
T Consensus 105 ~ks~~ei~~a~e~gi~~i~vdS~~El~~l~~~a~~~~~~v~lRInP~~~~~th~~~~tg~~~sKFG~~~~~a~~~~~~~~ 184 (394)
T COG0019 105 AKSEEEIAFALELGIKLINVDSEEELERLSAIAPGLVARVSLRINPGVSAGTHEYIATGGKSSKFGISPEEALDVLERAA 184 (394)
T ss_pred CCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99999999999869938997999999999986456674499998899877758666778630236989889899999986
Q ss_pred -HHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHC----CCCCEEEEECCCCCCCCCC-CC---CHHHHHHHHHHHH
Q ss_conf -4314960665305656661478999999999898650----8875087533776664455-68---0789999998754
Q gi|254780741|r 153 -SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDKD-YP---VKDFCQRLKEFSE 223 (367)
Q Consensus 153 -~~~~~i~Gih~H~gs~~~~~~~~~~~l~~~~~~~~~~----~~~l~~idiGGG~~~~~~~-~~---~~~~~~~i~~~~~ 223 (367)
T Consensus 185 ~~~~l~~~Glh~HiGSq~~d~~~~~~a~~~~~~~~~~~~~~~g~~l~~inlGGG~gi~Y~~~~~~~~~~~~~~~l~~~~~ 264 (394)
T COG0019 185 KLLGLELVGLHFHIGSQITDLDPFEEALAKVEELFGRLAEELGIQLEWLNLGGGLGITYEDEYDPPDLAAYAKALKEAFG 264 (394)
T ss_pred HCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 46788248999851787888089999999999999998875088740899669857687887884019999999999985
Q ss_pred H--CCCEEEEEHHHHCCCCCEEEEEEEEEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCCCC--C--CCCCEEEEEECCC
Q ss_conf 2--1650453002201457418887887863044-333433335656566400134553000--2--4786459986233
Q gi|254780741|r 224 K--YSVQIYLEPGEAIVTNTTTLNTTVLDISENI-KNLVIVDSSVEAHVPDYLLYQESATIY--P--NTGPYTAMVCGRS 296 (367)
Q Consensus 224 ~--~~~~l~iEPGR~lv~~ag~lv~~V~~~K~~~-~~~v~vd~g~~~~~~~~~~~~~~~~~~--~--~~~~~~~~v~G~~ 296 (367)
T Consensus 265 ~~~~~~~l~~EPGR~iv~~aG~Lvt~V~~~k~~~~~~~v~vD~gm~~~~rpaly~a~~~~~~~~~~~~~~~~~~~v~G~~ 344 (394)
T COG0019 265 EYAEDVELILEPGRAIVANAGVLVTEVLDVKENGERNFVIVDGGMNDLMRPALYGAYHHIRLNRTDEDAEREEYDVVGPT 344 (394)
T ss_pred HCCCCCEEEECCCHHHHHCCEEEEEEEEEEEEECCCEEEEECCHHHCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEECCC
T ss_conf 15678659983775775154369999999997077269998034423867777587443312456678873799998787
Q ss_pred CCCCCEEEECCCCCCC-CCCCEEEEECCCCHHHHHCCCCCCCCCCEEEEE
Q ss_conf 3666455213566778-879899996887022324347689988779999
Q gi|254780741|r 297 CLAGDIFGEFHFEKPV-KIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 (367)
Q Consensus 297 C~~~D~l~~~~~~~~l-~~GD~l~i~~~GAY~~~~~~~Fn~~~~P~~v~~ 345 (367)
T Consensus 345 CesgD~~~~d~~lp~~~~~GD~l~i~~aGAY~~sm~s~yN~~~~~~ev~v 394 (394)
T COG0019 345 CESGDVLARDRALPEPLKVGDLLVILDAGAYGASMSSNYNGRPRPAEVLV 394 (394)
T ss_pred CCCCCEEEEEEECCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCEEEC
T ss_conf 68887771212378768989999990463267766043569899853559