HHsearch alignment for GI: 254780741 and conserved domain: COG1166
>COG1166 SpeA Arginine decarboxylase (spermidine biosynthesis) [Amino acid transport and metabolism].
Probab=100.00 E-value=2.1e-31 Score=226.54 Aligned_cols=362 Identities=17% Similarity=0.163 Sum_probs=256.9
Q ss_pred CCCCEEEEEHHHHHHHHHHHHHHHHH-------C-CCEEEEEEECCCCHHHHHHHHHHC----CEEEEECHHHHHHHHC-
Q ss_conf 88856897799999999999998533-------6-986999541059999999998518----7489807999989873-
Q gi|254780741|r 2 IKTPYYLIDKQKLLNNLDTALYIRKN-------A-GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHE- 68 (367)
Q Consensus 2 i~TP~yv~d~~~i~~n~~~~~~~~~~-------~-~~~i~yA~KaN~~~~il~~l~~~g----~g~dv~S~~E~~la~~- 68 (367)
T Consensus 78 ~~LPlL~rFp~IL~~Rl~~ln~aF~~Ai~ey~Y~g~Y~~VyPIKvNQ~r~vVe~Lv~~g~~~~~GLEAGSK~ELm~vLA~ 157 (652)
T COG1166 78 LRLPLLLRFPQILQHRLRSLNAAFARAIEEYGYPGGYFAVYPIKVNQHRRVVESLVASGKGYPLGLEAGSKAELMAVLAH 157 (652)
T ss_pred CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 89856985269999999999999999999808898605898766554188999998636898776667887999999983
Q ss_pred -CCCCCCEEECCCCCHHHHHHHH-----CCCCEEEECCCHHHHHHHHHHHCCCC--CCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf -6880108853777803478861-----38868985672059999998612345--614899635774431012455786
Q gi|254780741|r 69 -KFGGETHAYNVAYKDCEIDAVL-----SNCDTIIFNTVSQLNKFKDKAQKLHK--KIGLRINPSVSYSKFILADPNRPF 140 (367)
Q Consensus 69 -g~~~~~i~~~~~~~~~el~~a~-----~~~~~i~iDs~~El~~i~~~a~~~~~--~I~lRinP~~~~~~~~~~~~~~~~ 140 (367)
T Consensus 158 ~~~~~~~IvCNGyKDrEyI~lAlig~kLGh~v~ivIEklsEl~~Vl~eA~~lgvkP~lGvR~RL~-sqGsGkW~~SgG~k 236 (652)
T COG1166 158 AGNPGSLIVCNGYKDREYIRLALIGEKLGHKVYIVIEKLSELDLVLEEAKQLGVKPRLGVRARLA-SQGSGKWQSSGGEK 236 (652)
T ss_pred CCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCCCCCEEEEEEE-CCCCCCCCCCCCCH
T ss_conf 38999717845746099999999999827954999922679999999999739997633688862-35567500046831
Q ss_pred CCCCCCHHHHHHHH--------HCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH---HCCCCCEEEEECCCCCCCCC--
Q ss_conf 43574278888743--------149606653056566614789999999998986---50887508753377666445--
Q gi|254780741|r 141 SRLGEKCKDKIESE--------IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK-- 207 (367)
Q Consensus 141 skfG~~~~~~~~~~--------~~~i~Gih~H~gs~~~~~~~~~~~l~~~~~~~~---~~~~~l~~idiGGG~~~~~~-- 207 (367)
T Consensus 237 sKFGLsa~qvL~~v~~Lre~~~Ld~l~llHFHlGSQisnI~~ik~~~rEA~r~YvEL~klGa~i~~~dVGGGLgVDYdGt 316 (652)
T COG1166 237 SKFGLSATQVLQVVERLREANLLDSLQLLHFHLGSQISNIRDIKTGVREAARFYVELRKLGANIKYFDVGGGLGVDYDGT 316 (652)
T ss_pred HCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEECCCCC
T ss_conf 01488889999999998762657766787641000134569999999999999999998278860785168443321676
Q ss_pred --------CCCCHHHHH----HHHHHHHHCC---CEEEEEHHHHCCCCCEEEEEEEEEEECCCC--CCCCCCC-------
Q ss_conf --------568078999----9998754216---504530022014574188878878630443--3343333-------
Q gi|254780741|r 208 --------DYPVKDFCQ----RLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIK--NLVIVDS------- 263 (367)
Q Consensus 208 --------~~~~~~~~~----~i~~~~~~~~---~~l~iEPGR~lv~~ag~lv~~V~~~K~~~~--~~v~vd~------- 263 (367)
T Consensus 317 ~t~~~~S~NY~l~eYA~dVV~~l~d~C~~~~~p~P~IisESGRaitAHhaVLI~~Vi~v~~~~~~~~p~~~~~~~~~~l~ 396 (652)
T COG1166 317 RTQSDCSKNYGLNEYANDVVWALKDACEEKGLPHPTIISESGRAITAHHAVLIANVIGVERHEYNDAPLPDAPRNLPPLW 396 (652)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 44663233678899998999999999984599998078104423220422898630002457877788888843245899
Q ss_pred --------CCC-----------------------C----C----------------------------------------
Q ss_conf --------565-----------------------6----5----------------------------------------
Q gi|254780741|r 264 --------SVE-----------------------A----H---------------------------------------- 268 (367)
Q Consensus 264 --------g~~-----------------------~----~---------------------------------------- 268 (367)
T Consensus 397 ~~~~e~~~~i~~r~~~E~~hds~~~~~~~~~~f~~G~l~L~~Ra~aEqL~~aic~ki~~~~~~~~~~~r~~ldeLqe~la 476 (652)
T COG1166 397 RTLQELYESITARNLREWYHDSQDDLEDAHSLFNLGYLSLQERAWAEQLYLAICHKVQQLLRQKNRSHRPILDELQERLA 476 (652)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 99999863457788999998767679999987503532288888799999999999999854530687678999999976
Q ss_pred ------------CCCCCC-CCCCCCC----CCCCCCEEEEEECCCCCCCCEE---EE------CCCCCCCCCC--CEEEE
Q ss_conf ------------664001-3455300----0247864599862333666455---21------3566778879--89999
Q gi|254780741|r 269 ------------VPDYLL-YQESATI----YPNTGPYTAMVCGRSCLAGDIF---GE------FHFEKPVKIG--DRISF 320 (367)
Q Consensus 269 ------------~~~~~~-~~~~~~~----~~~~~~~~~~v~G~~C~~~D~l---~~------~~~~~~l~~G--D~l~i 320 (367)
T Consensus 477 dky~vNfSlFQSlPD~W~IdQlFPI~Pl~rLdE~PtRravL~DiTCDSDG~Id~yid~~~i~s~Lplh~~~~~epy~lGf 556 (652)
T COG1166 477 DKYYVNFSLFQSLPDAWGIDQLFPILPLHRLDEEPTRRAVLLDITCDSDGKIDHYIDGDGIKSTLPLHEYDPGEPYLLGF 556 (652)
T ss_pred HHHEEEEHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 67477205750584121002356623022358875511378865307988600231376654544478889998756652
Q ss_pred ECCCCHHHHHCCCCC--CCCCCEEEEEECCCCEEE--E-EECCHHHHHH
Q ss_conf 688702232434768--998877999967990999--9-7389899987
Q gi|254780741|r 321 EDVAGYNINRKNWFN--GINMPTIAVKNVDGTIKA--I-REFSYNDYYN 364 (367)
Q Consensus 321 ~~~GAY~~~~~~~Fn--~~~~P~~v~~~~~g~~~~--~-r~e~~~d~~~ 364 (367)
T Consensus 557 FLVGAYQEILG~~HNLFGdt~~v~V~v~~~G~y~ie~~~egdTi~dmL~ 605 (652)
T COG1166 557 FLVGAYQEILGNMHNLFGDTTAVHVVVDPKGSYEIEDIVEGDTVADMLE 605 (652)
T ss_pred EHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHH
T ss_conf 1275799997666650589845899987998679986523560999998