HHsearch alignment for GI: 254780741 and conserved domain: COG1166

>COG1166 SpeA Arginine decarboxylase (spermidine biosynthesis) [Amino acid transport and metabolism].
Probab=100.00  E-value=2.1e-31  Score=226.54  Aligned_cols=362  Identities=17%  Similarity=0.163  Sum_probs=256.9

Q ss_pred             CCCCEEEEEHHHHHHHHHHHHHHHHH-------C-CCEEEEEEECCCCHHHHHHHHHHC----CEEEEECHHHHHHHHC-
Q ss_conf             88856897799999999999998533-------6-986999541059999999998518----7489807999989873-
Q gi|254780741|r    2 IKTPYYLIDKQKLLNNLDTALYIRKN-------A-GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHE-   68 (367)
Q Consensus         2 i~TP~yv~d~~~i~~n~~~~~~~~~~-------~-~~~i~yA~KaN~~~~il~~l~~~g----~g~dv~S~~E~~la~~-   68 (367)
T Consensus        78 ~~LPlL~rFp~IL~~Rl~~ln~aF~~Ai~ey~Y~g~Y~~VyPIKvNQ~r~vVe~Lv~~g~~~~~GLEAGSK~ELm~vLA~  157 (652)
T COG1166          78 LRLPLLLRFPQILQHRLRSLNAAFARAIEEYGYPGGYFAVYPIKVNQHRRVVESLVASGKGYPLGLEAGSKAELMAVLAH  157 (652)
T ss_pred             CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             89856985269999999999999999999808898605898766554188999998636898776667887999999983


Q ss_pred             -CCCCCCEEECCCCCHHHHHHHH-----CCCCEEEECCCHHHHHHHHHHHCCCC--CCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf             -6880108853777803478861-----38868985672059999998612345--614899635774431012455786
Q gi|254780741|r   69 -KFGGETHAYNVAYKDCEIDAVL-----SNCDTIIFNTVSQLNKFKDKAQKLHK--KIGLRINPSVSYSKFILADPNRPF  140 (367)
Q Consensus        69 -g~~~~~i~~~~~~~~~el~~a~-----~~~~~i~iDs~~El~~i~~~a~~~~~--~I~lRinP~~~~~~~~~~~~~~~~  140 (367)
T Consensus       158 ~~~~~~~IvCNGyKDrEyI~lAlig~kLGh~v~ivIEklsEl~~Vl~eA~~lgvkP~lGvR~RL~-sqGsGkW~~SgG~k  236 (652)
T COG1166         158 AGNPGSLIVCNGYKDREYIRLALIGEKLGHKVYIVIEKLSELDLVLEEAKQLGVKPRLGVRARLA-SQGSGKWQSSGGEK  236 (652)
T ss_pred             CCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCCCCCEEEEEEE-CCCCCCCCCCCCCH
T ss_conf             38999717845746099999999999827954999922679999999999739997633688862-35567500046831


Q ss_pred             CCCCCCHHHHHHHH--------HCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH---HCCCCCEEEEECCCCCCCCC--
Q ss_conf             43574278888743--------149606653056566614789999999998986---50887508753377666445--
Q gi|254780741|r  141 SRLGEKCKDKIESE--------IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK--  207 (367)
Q Consensus       141 skfG~~~~~~~~~~--------~~~i~Gih~H~gs~~~~~~~~~~~l~~~~~~~~---~~~~~l~~idiGGG~~~~~~--  207 (367)
T Consensus       237 sKFGLsa~qvL~~v~~Lre~~~Ld~l~llHFHlGSQisnI~~ik~~~rEA~r~YvEL~klGa~i~~~dVGGGLgVDYdGt  316 (652)
T COG1166         237 SKFGLSATQVLQVVERLREANLLDSLQLLHFHLGSQISNIRDIKTGVREAARFYVELRKLGANIKYFDVGGGLGVDYDGT  316 (652)
T ss_pred             HCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEECCCCC
T ss_conf             01488889999999998762657766787641000134569999999999999999998278860785168443321676


Q ss_pred             --------CCCCHHHHH----HHHHHHHHCC---CEEEEEHHHHCCCCCEEEEEEEEEEECCCC--CCCCCCC-------
Q ss_conf             --------568078999----9998754216---504530022014574188878878630443--3343333-------
Q gi|254780741|r  208 --------DYPVKDFCQ----RLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIK--NLVIVDS-------  263 (367)
Q Consensus       208 --------~~~~~~~~~----~i~~~~~~~~---~~l~iEPGR~lv~~ag~lv~~V~~~K~~~~--~~v~vd~-------  263 (367)
T Consensus       317 ~t~~~~S~NY~l~eYA~dVV~~l~d~C~~~~~p~P~IisESGRaitAHhaVLI~~Vi~v~~~~~~~~p~~~~~~~~~~l~  396 (652)
T COG1166         317 RTQSDCSKNYGLNEYANDVVWALKDACEEKGLPHPTIISESGRAITAHHAVLIANVIGVERHEYNDAPLPDAPRNLPPLW  396 (652)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf             44663233678899998999999999984599998078104423220422898630002457877788888843245899


Q ss_pred             --------CCC-----------------------C----C----------------------------------------
Q ss_conf             --------565-----------------------6----5----------------------------------------
Q gi|254780741|r  264 --------SVE-----------------------A----H----------------------------------------  268 (367)
Q Consensus       264 --------g~~-----------------------~----~----------------------------------------  268 (367)
T Consensus       397 ~~~~e~~~~i~~r~~~E~~hds~~~~~~~~~~f~~G~l~L~~Ra~aEqL~~aic~ki~~~~~~~~~~~r~~ldeLqe~la  476 (652)
T COG1166         397 RTLQELYESITARNLREWYHDSQDDLEDAHSLFNLGYLSLQERAWAEQLYLAICHKVQQLLRQKNRSHRPILDELQERLA  476 (652)
T ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf             99999863457788999998767679999987503532288888799999999999999854530687678999999976


Q ss_pred             ------------CCCCCC-CCCCCCC----CCCCCCEEEEEECCCCCCCCEE---EE------CCCCCCCCCC--CEEEE
Q ss_conf             ------------664001-3455300----0247864599862333666455---21------3566778879--89999
Q gi|254780741|r  269 ------------VPDYLL-YQESATI----YPNTGPYTAMVCGRSCLAGDIF---GE------FHFEKPVKIG--DRISF  320 (367)
Q Consensus       269 ------------~~~~~~-~~~~~~~----~~~~~~~~~~v~G~~C~~~D~l---~~------~~~~~~l~~G--D~l~i  320 (367)
T Consensus       477 dky~vNfSlFQSlPD~W~IdQlFPI~Pl~rLdE~PtRravL~DiTCDSDG~Id~yid~~~i~s~Lplh~~~~~epy~lGf  556 (652)
T COG1166         477 DKYYVNFSLFQSLPDAWGIDQLFPILPLHRLDEEPTRRAVLLDITCDSDGKIDHYIDGDGIKSTLPLHEYDPGEPYLLGF  556 (652)
T ss_pred             HHHEEEEHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf             67477205750584121002356623022358875511378865307988600231376654544478889998756652


Q ss_pred             ECCCCHHHHHCCCCC--CCCCCEEEEEECCCCEEE--E-EECCHHHHHH
Q ss_conf             688702232434768--998877999967990999--9-7389899987
Q gi|254780741|r  321 EDVAGYNINRKNWFN--GINMPTIAVKNVDGTIKA--I-REFSYNDYYN  364 (367)
Q Consensus       321 ~~~GAY~~~~~~~Fn--~~~~P~~v~~~~~g~~~~--~-r~e~~~d~~~  364 (367)
T Consensus       557 FLVGAYQEILG~~HNLFGdt~~v~V~v~~~G~y~ie~~~egdTi~dmL~  605 (652)
T COG1166         557 FLVGAYQEILGNMHNLFGDTTAVHVVVDPKGSYEIEDIVEGDTVADMLE  605 (652)
T ss_pred             EHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHH
T ss_conf             1275799997666650589845899987998679986523560999998