HHsearch alignment for GI: 254780741 and conserved domain: PRK00053
>PRK00053 alr alanine racemase; Reviewed.
Probab=99.47 E-value=3.2e-10 Score=86.92 Aligned_cols=295 Identities=16% Similarity=0.131 Sum_probs=165.4
Q ss_pred CEEE-EEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC----HHHHHHHHHHC-CEEEEECHHHHHHHHC-CCCCCCEEE
Q ss_conf 5689-779999999999999853369869995410599----99999998518-7489807999989873-688010885
Q gi|254780741|r 5 PYYL-IDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA----WGMFDTLNQYM-DGTTSSSLYEVMLGHE-KFGGETHAY 77 (367)
Q Consensus 5 P~yv-~d~~~i~~n~~~~~~~~~~~~~~i~yA~KaN~~----~~il~~l~~~g-~g~dv~S~~E~~la~~-g~~~~~i~~ 77 (367)
T Consensus 3 ~t~~eIdl~al~~N~~~i~~~~~--~~~i~aVVKAnAYGhG~~~va~~l~~~Gv~~faVa~~~EAi~LR~~g~~~~Ilvl 80 (360)
T PRK00053 3 PAWAEIDLDALAHNLRQLRQLAG--SSKLMAVVKANAYGHGAVEVAKTLLEAGADGFGVATLEEALELREAGITAPILLL 80 (360)
T ss_pred CEEEEEEHHHHHHHHHHHHHHCC--CCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCEEEE
T ss_conf 77999839999999999996589--9809999944225488999999999879799999189999999963999998997
Q ss_pred CCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH----
Q ss_conf 3777803478861388689856720599999986123456148996357744310124557864357427888874----
Q gi|254780741|r 78 NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---- 153 (367)
Q Consensus 78 ~~~~~~~el~~a~~~~~~i~iDs~~El~~i~~~a~~~~~~I~lRinP~~~~~~~~~~~~~~~~skfG~~~~~~~~~---- 153 (367)
T Consensus 81 ~~~~-~~~~~~~~~~~l~~~i~s~~~l~~~~~~~~~~~~~vhlkiD------------TG--M~RlG~~~~e~~~~~~~i 145 (360)
T PRK00053 81 GGFF-EADLPLIVAYDIETAVHSLEQLRALEKAALSAPLKVHLKVD------------TG--MHRLGVRPEEAEAALERL 145 (360)
T ss_pred CCCC-HHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCEEEEEEC------------CC--CCCCCCCHHHHHHHHHHH
T ss_conf 6999-79999999759889999899999999746158954999985------------89--874788878999999999
Q ss_pred ---HHCCCEEEEECCCCC-CCCHHHHHHHHHHHHHHHHHCC---CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf ---314960665305656-6614789999999998986508---875087533776664455680789999998754216
Q gi|254780741|r 154 ---EIKNVNGLMFHNNCE-NKSFLCFSAMLKNIEKEFGHFI---TQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYS 226 (367)
Q Consensus 154 ---~~~~i~Gih~H~gs~-~~~~~~~~~~l~~~~~~~~~~~---~~l~~idiGGG~~~~~~~~~~~~~~~~i~~~~~~~~ 226 (367)
T Consensus 146 ~~~~~l~~~gi~SHla~AD~~~~~~~~~Q~~~F~~~~~~l~~~~~~~h~aNSag~l~~~~~~~d~------VR~Gi~lYG 219 (360)
T PRK00053 146 RALPNLRLEGIMSHFATADEPDNSYTDEQLARFKAFLAGLPGKGKVRHLANSAAILRWPDLHFDW------VRPGIALYG 219 (360)
T ss_pred HHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHCCHHHHCCCCCCCCE------ECCCCEEEC
T ss_conf 85899827899741124788885899999999999998631079698642369877097334771------523801027
Q ss_pred CEEE--EEHHHHCCCCCEEEEEEEEEEEC-CCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCC-----CCEEEEE
Q ss_conf 5045--30022014574188878878630-44333433335------656566400134553000247-----8645998
Q gi|254780741|r 227 VQIY--LEPGEAIVTNTTTLNTTVLDISE-NIKNLVIVDSS------VEAHVPDYLLYQESATIYPNT-----GPYTAMV 292 (367)
Q Consensus 227 ~~l~--iEPGR~lv~~ag~lv~~V~~~K~-~~~~~v~vd~g------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v 292 (367)
T Consensus 220 ~~P~~~~~~~~~~lkpv~sl~a~I~~i~~v~~G~~VgYg~t~~a~~~~~ia~v~iGYaDG~~R~ls~~~~v~i~G~~~pi 299 (360)
T PRK00053 220 YSPSGEDLGLDLGLKPAMTLKSSLIAVRELKAGEGVGYGGTFTAERDTRIAVVPIGYADGYPRNLPNGTPVLVNGRRVPI 299 (360)
T ss_pred CCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCEECCCCCEECCCCCEEEEEEEECCCCCCCCCCCCCEEEECCEEEEE
T ss_conf 98775544545586456999998005785279882437993145778369997103145634314799689999999588
Q ss_pred ECCCCCCCCEEEECC-CCCCCCCCCEEEEECCC
Q ss_conf 623336664552135-66778879899996887
Q gi|254780741|r 293 CGRSCLAGDIFGEFH-FEKPVKIGDRISFEDVA 324 (367)
Q Consensus 293 ~G~~C~~~D~l~~~~-~~~~l~~GD~l~i~~~G 324 (367)
T Consensus 300 vGrv~M--D~~~vdvt~~~~~~~Gd~V~l~G~~ 330 (360)
T PRK00053 300 VGRVSM--DQLTVDLTDIPQVKVGDEVTLWGEA 330 (360)
T ss_pred ECEEEC--CEEEEECCCCCCCCCCCEEEEECCC
T ss_conf 478604--5389988899889999999998999