HHsearch alignment for GI: 254780741 and conserved domain: cd06829
>cd06829 PLPDE_III_CANSDC Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Carboxynorspermidine Decarboxylase. Carboxynorspermidine decarboxylase (CANSDC) catalyzes the decarboxylation of carboxynorspermidine, the last step in the biosynthesis of norspermidine. It is homologous to eukaryotic ornithine decarboxylase (ODC) and diaminopimelate decarboxylase (DapDC), which are fold type III PLP-dependent enzymes that contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. Based on this similarity, CANSDC may require homodimer formation and the presence of the PLP cofactor for its catalytic activity.
Probab=100.00 E-value=0 Score=620.31 Aligned_cols=342 Identities=45% Similarity=0.807 Sum_probs=317.1
Q ss_pred CCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCEEEEECHHHHHHHHCCCCCCCEEECCCCCH
Q ss_conf 85689779999999999999853369869995410599999999985187489807999989873688010885377780
Q gi|254780741|r 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHEKFGGETHAYNVAYKD 83 (367)
Q Consensus 4 TP~yv~d~~~i~~n~~~~~~~~~~~~~~i~yA~KaN~~~~il~~l~~~g~g~dv~S~~E~~la~~g~~~~~i~~~~~~~~ 83 (367)
T Consensus 1 TP~YVyd~~~i~~n~~~~~~~~~~~~~~i~YA~KAN~~~~il~~l~~~g~G~d~~S~~E~~la~~~~~~~~~~~~~~~~~ 80 (346)
T cd06829 1 TPCYVLDEAKLRRNLEILKRVQERSGAKILLALKAFSMWSVFPLIREYLDGTTASSLFEARLGREEFGGEVHTYSPAYRD 80 (346)
T ss_pred CCEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCCEEECCCCCH
T ss_conf 98999759999999999999773389879998824288899999997499699749999999741068764675687998
Q ss_pred HHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEE
Q ss_conf 34788613886898567205999999861234561489963577443101245578643574278888743149606653
Q gi|254780741|r 84 CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMF 163 (367)
Q Consensus 84 ~el~~a~~~~~~i~iDs~~El~~i~~~a~~~~~~I~lRinP~~~~~~~~~~~~~~~~skfG~~~~~~~~~~~~~i~Gih~ 163 (367)
T Consensus 81 ~el~~~~~~~~~i~~ds~~El~~i~~~~~~~~~~V~lRINP~~~~~~~~~~~tg~~~sKFGi~~~~~~~~~~~~i~Glh~ 160 (346)
T cd06829 81 DEIDEILRLADHIIFNSLSQLERFKDRAKAAGISVGLRINPEYSEVETDLYDPCAPGSRLGVTLDELEEEDLDGIEGLHF 160 (346)
T ss_pred HHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE
T ss_conf 99999997299899889999999998740589749999858987776766057898440378799987877735861477
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCEE
Q ss_conf 05656661478999999999898650887508753377666445568078999999875421650453002201457418
Q gi|254780741|r 164 HNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGEAIVTNTTT 243 (367)
Q Consensus 164 H~gs~~~~~~~~~~~l~~~~~~~~~~~~~l~~idiGGG~~~~~~~~~~~~~~~~i~~~~~~~~~~l~iEPGR~lv~~ag~ 243 (367)
T Consensus 161 H~~~~~-~~~~~~~~~~~i~~~~~~~~~~l~~id~GGG~~i~~~~~d~~~~~~~i~~~~~~~~~~liiEPGR~lVa~aG~ 239 (346)
T cd06829 161 HTLCEQ-DFDALERTLEAVEERFGEYLPQLKWLNLGGGHHITRPDYDVDRLIALIKRFKEKYGVEVYLEPGEAVALNTGY 239 (346)
T ss_pred EECCCC-CHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHHHCCEE
T ss_conf 633675-6999999999999999975210144551377666788879999999999999763973685363400435357
Q ss_pred EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCEEE
Q ss_conf 887887863044333433335656566400134553000----2478645998623336664552135667788798999
Q gi|254780741|r 244 LNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRIS 319 (367)
Q Consensus 244 lv~~V~~~K~~~~~~v~vd~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~G~~C~~~D~l~~~~~~~~l~~GD~l~ 319 (367)
T Consensus 240 llt~V~~ik~~g~~~~i~D~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~v~Gp~Ces~Dvl~~~~~~~~l~~GD~l~ 319 (346)
T cd06829 240 LVATVLDIVENGMPIAILDASATAHMPDVLEMPYRPPIRGAGEPGEGAHTYRLGGNSCLAGDVIGDYSFDEPLQVGDRLV 319 (346)
T ss_pred EEEEEEEEEECCEEEEEEECCCCCCCCHHHCCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCEEE
T ss_conf 99999999509778999836210376155514654233047888788846999878988867888666888999999999
Q ss_pred EECCCCHHHHHCCCCCCCCCCEEEEEE
Q ss_conf 968870223243476899887799996
Q gi|254780741|r 320 FEDVAGYNINRKNWFNGINMPTIAVKN 346 (367)
Q Consensus 320 i~~~GAY~~~~~~~Fn~~~~P~~v~~~ 346 (367)
T Consensus 320 i~~~GAY~~smas~yN~~p~Pavv~~d 346 (346)
T cd06829 320 FEDMAHYTMVKTNTFNGVRLPSIAIRD 346 (346)
T ss_pred ECCCCHHHHHHHCCCCCCCCCCEEEEC
T ss_conf 915758766763127899998579839