HHsearch alignment for GI: 254780741 and conserved domain: pfam00278
>pfam00278 Orn_DAP_Arg_deC Pyridoxal-dependent decarboxylase, C-terminal sheet domain. These pyridoxal-dependent decarboxylases act on ornithine, lysine, arginine and related substrates.
Probab=99.88 E-value=1.2e-22 Score=168.74 Aligned_cols=103 Identities=23% Similarity=0.329 Sum_probs=89.1
Q ss_pred EEEEEEEEEECC-C-CCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCEEEEEECCCCCCCCEEEECCCCC-CCCCC
Q ss_conf 888788786304-4-333433335656566400134553000----2478645998623336664552135667-78879
Q gi|254780741|r 243 TLNTTVLDISEN-I-KNLVIVDSSVEAHVPDYLLYQESATIY----PNTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIG 315 (367)
Q Consensus 243 ~lv~~V~~~K~~-~-~~~v~vd~g~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~G~~C~~~D~l~~~~~~~-~l~~G 315 (367)
T Consensus 1 ~Lvt~V~~~k~~~~~~~~~~ld~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gp~C~s~D~l~~~~~lP~~l~~G 80 (110)
T pfam00278 1 TLVTEVIDVKERGDDRKFVYLDDGVYGSPDPALYDALHPILPVSRLDDEPLRPYTLAGPTCDSGDVLARDVSLPLELEVG 80 (110)
T ss_pred CCEEEEEEEECCCCCCEEEEECCCHHCCCCHHHHCCCCCCEEECCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCC
T ss_conf 95799999953899516999888531141147648634428701678887357999741567687982233077233789
Q ss_pred CEEEEECCCCHHHHHCCCCCCCCCCEEEEE
Q ss_conf 899996887022324347689988779999
Q gi|254780741|r 316 DRISFEDVAGYNINRKNWFNGINMPTIAVK 345 (367)
Q Consensus 316 D~l~i~~~GAY~~~~~~~Fn~~~~P~~v~~ 345 (367)
T Consensus 81 D~l~~~~~GAY~~~~ss~fNg~~~p~~v~v 110 (110)
T pfam00278 81 DWLVFFDAGAYTISLSSNFNGFPRPAEVLV 110 (110)
T ss_pred CEEEECCCCCCCCHHCCCCCCCCCCCEEEC
T ss_conf 999988886233100266679898879979