HHsearch alignment for GI: 254780741 and conserved domain: pfam02784
>pfam02784 Orn_Arg_deC_N Pyridoxal-dependent decarboxylase, pyridoxal binding domain. These pyridoxal-dependent decarboxylases acting on ornithine, lysine, arginine and related substrates This domain has a TIM barrel fold.
Probab=100.00 E-value=0 Score=338.38 Aligned_cols=227 Identities=17% Similarity=0.195 Sum_probs=191.9
Q ss_pred EHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCEEEEECHHHHHHHH-CCCCCCCEEEC-CCCCHHHHH
Q ss_conf 7999999999999985336986999541059999999998518748980799998987-36880108853-777803478
Q gi|254780741|r 10 DKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-EKFGGETHAYN-VAYKDCEID 87 (367)
Q Consensus 10 d~~~i~~n~~~~~~~~~~~~~~i~yA~KaN~~~~il~~l~~~g~g~dv~S~~E~~la~-~g~~~~~i~~~-~~~~~~el~ 87 (367)
T Consensus 1 D~~~i~~~~~~~~~~~-~p~~~~~YAvKaN~~~~il~~l~~~G~g~dv~S~~El~~al~~g~~~~~I~~~g~~k~~~~i~ 79 (245)
T pfam02784 1 DLGRIIERAHALWQAF-LPRIQPFYAVKANSDPAVLRLLAELGLGFDCASKGELERVLAAGVPPERIIFANPCKSRSELR 79 (245)
T ss_pred CHHHHHHHHHHHHHHH-CCCCEEEEEEEECCCHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCHHHEEEECCCCCHHHHH
T ss_conf 9689999999999984-899779988501888999999998299299989999999998698957889814435468999
Q ss_pred HHHCCC-CEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH------HCCCEE
Q ss_conf 861388-6898567205999999861234561489963577443101245578643574278888743------149606
Q gi|254780741|r 88 AVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE------IKNVNG 160 (367)
Q Consensus 88 ~a~~~~-~~i~iDs~~El~~i~~~a~~~~~~I~lRinP~~~~~~~~~~~~~~~~skfG~~~~~~~~~~------~~~i~G 160 (367)
T Consensus 80 ~a~~~gv~~i~vDs~~el~~i~~~~~~--~~i~lRvnp~~~~~~~~~~~~g~-~sKFGi~~~~~~~~~~~~~~~~~~~~G 156 (245)
T pfam02784 80 YALEHGVVCVTVDNVEELEKLARLAPE--ARLLLRVKPDVDAHAHCYLSTGQ-DSKFGADLEEAEALLKAAKELGLNVVG 156 (245)
T ss_pred HHHHHCCCCEEECCHHHHHHHHHHCCC--CCEEEEEEECCCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 999827761442799999999985753--77899994067766554444688-777689999999999999867997547
Q ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHH---HCCCCCEEEEECCCCCCCCC-CCCCHHHHHHHHHHHHHC-----CCEEEE
Q ss_conf 653056566614789999999998986---50887508753377666445-568078999999875421-----650453
Q gi|254780741|r 161 LMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDK-DYPVKDFCQRLKEFSEKY-----SVQIYL 231 (367)
Q Consensus 161 ih~H~gs~~~~~~~~~~~l~~~~~~~~---~~~~~l~~idiGGG~~~~~~-~~~~~~~~~~i~~~~~~~-----~~~l~i 231 (367)
T Consensus 157 lH~H~GSq~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~idiGGGf~v~Y~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~ 236 (245)
T pfam02784 157 VHFHVGSGCTDAEAFVKAARDARNVFDQGAELGFELKILDLGGGFGVDYTGAEDFEEYAEVINAALEEVFPHDPHPTIIA 236 (245)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 55653657899899999999999999999980998319985899588889999989999999999999845599808999
Q ss_pred EHHHHCCCC
Q ss_conf 002201457
Q gi|254780741|r 232 EPGEAIVTN 240 (367)
Q Consensus 232 EPGR~lv~~ 240 (367)
T Consensus 237 EPGR~lvap 245 (245)
T pfam02784 237 EPGRYIVAP 245 (245)
T ss_pred ECCCCCCCC
T ss_conf 578000286