HHsearch results for GI: 254780741 and protein with PDBid: 2nva_A
>2nva_A Arginine decarboxylase, A207R protein; PLP, TIM barrel, eukaryotic ODC- like, lyase; HET: PL2; 1.80A {Paramecium bursaria chlorella virus 1} PDB: 2nv9_A*
Probab=100.00 E-value=0 Score=502.45 Aligned_cols=333 Identities=15% Similarity=0.169 Sum_probs=270.1
Q ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCEEEEECHHHHHHHHC-CCCCCCEEEC-CC
Q ss_conf 885689779999999999999853369869995410599999999985187489807999989873-6880108853-77
Q gi|254780741|r 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYN-VA 80 (367)
Q Consensus 3 ~TP~yv~d~~~i~~n~~~~~~~~~~~~~~i~yA~KaN~~~~il~~l~~~g~g~dv~S~~E~~la~~-g~~~~~i~~~-~~ 80 (367)
.|||||||++.|++|+++++.+| |+++++||+||||++.|++++++.|+|+||+|++|+++|++ ||++++|+|+ |.
T Consensus 16 ~~~fyv~d~~~i~~~~~~~~~~~--p~v~~~YAvKaN~~~~vl~~l~~~G~G~dv~S~~El~~al~~G~~~~~Ii~~g~~ 93 (372)
T 2nva_A 16 TKSFYVSSPKIVEDLIDQWTILF--PRVTPHYAVKCNNDEVLLKTMCDKNVNFDCASSSEIKKVIQIGVSPSRIIFAHTM 93 (372)
T ss_dssp CSEEEEECHHHHHHHHHHHHHHC--TTEEEEEEGGGCCCHHHHHHHHHTTCEEEECSHHHHHHHHHHTCCGGGEEECCSC
T ss_pred CCCEEEEEHHHHHHHHHHHHHHC--CCCEEEEEECCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCHHHEEECCCC
T ss_conf 98689972999999999999878--8986988851189899999999849849996999999999859791249994898
Q ss_pred CCHHHHHHHHCCC-CEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH------H
Q ss_conf 7803478861388-68985672059999998612345614899635774431012455786435742788887------4
Q gi|254780741|r 81 YKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE------S 153 (367)
Q Consensus 81 ~~~~el~~a~~~~-~~i~iDs~~El~~i~~~a~~~~~~I~lRinP~~~~~~~~~~~~~~~~skfG~~~~~~~~------~ 153 (367)
|+++||+.|++.+ .++++||++|++++.+++.+ .++.+|+++..... .+...++||++..++.+ .
T Consensus 94 K~~~el~~ai~~gv~i~~~ds~~~~~~i~~~~~~--~~~~~~~~~~~~~~------~~~~~~~fg~~~~~~~~~~~~a~~ 165 (372)
T 2nva_A 94 KTIDDLIFAKDQGVDIATFDSSFELDKIHTYHPN--CKMILRIRCDDPNA------TVQLGNKFGANEDEIRHLLEYAKQ 165 (372)
T ss_dssp CCHHHHHHHHHHTCCEEEECSHHHHHHHHHHCTT--CEEEEEBCCCCTTC------SBCCTTTSSBCGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC--CCCCEEEECCCCCC------CCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 9999999999859970026539999999875513--33210110156755------445688777771777999999985
Q ss_pred HHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH---HCCCCCEEEEECCCCCCCCCCCCCH-HHHHH----HHHHHHHC
Q ss_conf 3149606653056566614789999999998986---5088750875337766644556807-89999----99875421
Q gi|254780741|r 154 EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVK-DFCQR----LKEFSEKY 225 (367)
Q Consensus 154 ~~~~i~Gih~H~gs~~~~~~~~~~~l~~~~~~~~---~~~~~l~~idiGGG~~~~~~~~~~~-~~~~~----i~~~~~~~ 225 (367)
...++.|+|||+|||+.+.+.|.+.++.+.+++. +.+.++++|||||||++++.+.+.+ .+.+. ..+.....
T Consensus 166 ~~l~~~GlH~H~gS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IdiGGGf~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 245 (372)
T 2nva_A 166 LDIEVIGISFHVGSGSRNPEAYYRAIKSSKEAFNEAISVGHKPYILDIGGGLHADIDEGELSTYMSDYINDAIKDFFPED 245 (372)
T ss_dssp TTCCEEEEECCCCBSBCCHHHHHHHHHHHHHHHHHHHHHTCCCCEEECCSCBCCCCC---CCCHHHHHHHHHHHHHCCCT
T ss_pred CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 69818899986687658768999999987777766675079742899778867388887777459999876543024655
Q ss_pred CCEEEEEHHHHCCCCCEEEEEEEEEEECC-CCCCCCCCCCCCCCCCCCCCCCCC--CCCC---C-CCCCEEEEEECCCCC
Q ss_conf 65045300220145741888788786304-433343333565656640013455--3000---2-478645998623336
Q gi|254780741|r 226 SVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQES--ATIY---P-NTGPYTAMVCGRSCL 298 (367)
Q Consensus 226 ~~~l~iEPGR~lv~~ag~lv~~V~~~K~~-~~~~v~vd~g~~~~~~~~~~~~~~--~~~~---~-~~~~~~~~v~G~~C~ 298 (367)
+++|++||||+||++||+++|+|+++|++ +..++++|+|+++.+.+.+....+ +... + ++...+++|+||||+
T Consensus 246 ~~~l~~EPGR~lva~ag~llt~V~~~k~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~C~ 325 (372)
T 2nva_A 246 TVTIVAEPGRFFAEHYSVLATQVIGKRVRDGLYEYFFNESTYGGFSNVIFEKSVPTPQLLRDVPDDEEYVPSVLYGCTCD 325 (372)
T ss_dssp TCEEEECCSHHHHGGGEEEEEEEEEEEEETTEEEEEESCCTTTTCTHHHHSCCCCCCEESSCCCTTCCEEEEEEECSSSC
T ss_pred CCEEECCCCEEEECCEEEEEEEEEEEEEECCCEEEEEECCCCCCCCCHHHHCCCCCEEEECCCCCCCCEEEEEEEECCCC
T ss_conf 53331377103514646999999999983782268840323575531121104564011036788787778999937988
Q ss_pred CCCEEEECCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCEEEEE
Q ss_conf 66455213566778879899996887022324347689988779999
Q gi|254780741|r 299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK 345 (367)
Q Consensus 299 ~~D~l~~~~~~~~l~~GD~l~i~~~GAY~~~~~~~Fn~~~~P~~v~~ 345 (367)
++|+|+++..+|++++||+|+|.||||||++|+|+||++|+|.++++
T Consensus 326 ~~D~l~~~~~lP~l~~GD~l~~~~~GAY~~s~~s~fN~~~~p~v~~~ 372 (372)
T 2nva_A 326 GVDVINHNVALPELHIGDWVYFPSWGAYTNVLTTSFNGFGEYDVYYI 372 (372)
T ss_dssp TTCEEEEEEEEECCCTTCEEEESSCCSSSGGGCCCGGGCCCEEEEEC
T ss_pred CCCEECCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCEEEC
T ss_conf 47588866317999999999885945234845387889899817969