HHsearch results for GI: 254780741 and protein with PDBid: 2nva_A

>2nva_A Arginine decarboxylase, A207R protein; PLP, TIM barrel, eukaryotic ODC- like, lyase; HET: PL2; 1.80A {Paramecium bursaria chlorella virus 1} PDB: 2nv9_A*
Probab=100.00  E-value=0  Score=502.45  Aligned_cols=333  Identities=15%  Similarity=0.169  Sum_probs=270.1

Q ss_pred             CCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCEEEEECHHHHHHHHC-CCCCCCEEEC-CC
Q ss_conf             885689779999999999999853369869995410599999999985187489807999989873-6880108853-77
Q gi|254780741|r    3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYN-VA   80 (367)
Q Consensus         3 ~TP~yv~d~~~i~~n~~~~~~~~~~~~~~i~yA~KaN~~~~il~~l~~~g~g~dv~S~~E~~la~~-g~~~~~i~~~-~~   80 (367)
                      .|||||||++.|++|+++++.+|  |+++++||+||||++.|++++++.|+|+||+|++|+++|++ ||++++|+|+ |.
T Consensus        16 ~~~fyv~d~~~i~~~~~~~~~~~--p~v~~~YAvKaN~~~~vl~~l~~~G~G~dv~S~~El~~al~~G~~~~~Ii~~g~~   93 (372)
T 2nva_A           16 TKSFYVSSPKIVEDLIDQWTILF--PRVTPHYAVKCNNDEVLLKTMCDKNVNFDCASSSEIKKVIQIGVSPSRIIFAHTM   93 (372)
T ss_dssp             CSEEEEECHHHHHHHHHHHHHHC--TTEEEEEEGGGCCCHHHHHHHHHTTCEEEECSHHHHHHHHHHTCCGGGEEECCSC
T ss_pred             CCCEEEEEHHHHHHHHHHHHHHC--CCCEEEEEECCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCHHHEEECCCC
T ss_conf             98689972999999999999878--8986988851189899999999849849996999999999859791249994898


Q ss_pred             CCHHHHHHHHCCC-CEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH------H
Q ss_conf             7803478861388-68985672059999998612345614899635774431012455786435742788887------4
Q gi|254780741|r   81 YKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE------S  153 (367)
Q Consensus        81 ~~~~el~~a~~~~-~~i~iDs~~El~~i~~~a~~~~~~I~lRinP~~~~~~~~~~~~~~~~skfG~~~~~~~~------~  153 (367)
                      |+++||+.|++.+ .++++||++|++++.+++.+  .++.+|+++.....      .+...++||++..++.+      .
T Consensus        94 K~~~el~~ai~~gv~i~~~ds~~~~~~i~~~~~~--~~~~~~~~~~~~~~------~~~~~~~fg~~~~~~~~~~~~a~~  165 (372)
T 2nva_A           94 KTIDDLIFAKDQGVDIATFDSSFELDKIHTYHPN--CKMILRIRCDDPNA------TVQLGNKFGANEDEIRHLLEYAKQ  165 (372)
T ss_dssp             CCHHHHHHHHHHTCCEEEECSHHHHHHHHHHCTT--CEEEEEBCCCCTTC------SBCCTTTSSBCGGGHHHHHHHHHH
T ss_pred             CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC--CCCCEEEECCCCCC------CCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             9999999999859970026539999999875513--33210110156755------445688777771777999999985


Q ss_pred             HHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH---HCCCCCEEEEECCCCCCCCCCCCCH-HHHHH----HHHHHHHC
Q ss_conf             3149606653056566614789999999998986---5088750875337766644556807-89999----99875421
Q gi|254780741|r  154 EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFG---HFITQIEWISLGGGIHFTDKDYPVK-DFCQR----LKEFSEKY  225 (367)
Q Consensus       154 ~~~~i~Gih~H~gs~~~~~~~~~~~l~~~~~~~~---~~~~~l~~idiGGG~~~~~~~~~~~-~~~~~----i~~~~~~~  225 (367)
                      ...++.|+|||+|||+.+.+.|.+.++.+.+++.   +.+.++++|||||||++++.+.+.+ .+.+.    ..+.....
T Consensus       166 ~~l~~~GlH~H~gS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IdiGGGf~~~y~~~~~~~~~~~~~~~~~~~~~~~~  245 (372)
T 2nva_A          166 LDIEVIGISFHVGSGSRNPEAYYRAIKSSKEAFNEAISVGHKPYILDIGGGLHADIDEGELSTYMSDYINDAIKDFFPED  245 (372)
T ss_dssp             TTCCEEEEECCCCBSBCCHHHHHHHHHHHHHHHHHHHHHTCCCCEEECCSCBCCCCC---CCCHHHHHHHHHHHHHCCCT
T ss_pred             CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf             69818899986687658768999999987777766675079742899778867388887777459999876543024655


Q ss_pred             CCEEEEEHHHHCCCCCEEEEEEEEEEECC-CCCCCCCCCCCCCCCCCCCCCCCC--CCCC---C-CCCCEEEEEECCCCC
Q ss_conf             65045300220145741888788786304-433343333565656640013455--3000---2-478645998623336
Q gi|254780741|r  226 SVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQES--ATIY---P-NTGPYTAMVCGRSCL  298 (367)
Q Consensus       226 ~~~l~iEPGR~lv~~ag~lv~~V~~~K~~-~~~~v~vd~g~~~~~~~~~~~~~~--~~~~---~-~~~~~~~~v~G~~C~  298 (367)
                      +++|++||||+||++||+++|+|+++|++ +..++++|+|+++.+.+.+....+  +...   + ++...+++|+||||+
T Consensus       246 ~~~l~~EPGR~lva~ag~llt~V~~~k~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~C~  325 (372)
T 2nva_A          246 TVTIVAEPGRFFAEHYSVLATQVIGKRVRDGLYEYFFNESTYGGFSNVIFEKSVPTPQLLRDVPDDEEYVPSVLYGCTCD  325 (372)
T ss_dssp             TCEEEECCSHHHHGGGEEEEEEEEEEEEETTEEEEEESCCTTTTCTHHHHSCCCCCCEESSCCCTTCCEEEEEEECSSSC
T ss_pred             CCEEECCCCEEEECCEEEEEEEEEEEEEECCCEEEEEECCCCCCCCCHHHHCCCCCEEEECCCCCCCCEEEEEEEECCCC
T ss_conf             53331377103514646999999999983782268840323575531121104564011036788787778999937988


Q ss_pred             CCCEEEECCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCEEEEE
Q ss_conf             66455213566778879899996887022324347689988779999
Q gi|254780741|r  299 AGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVK  345 (367)
Q Consensus       299 ~~D~l~~~~~~~~l~~GD~l~i~~~GAY~~~~~~~Fn~~~~P~~v~~  345 (367)
                      ++|+|+++..+|++++||+|+|.||||||++|+|+||++|+|.++++
T Consensus       326 ~~D~l~~~~~lP~l~~GD~l~~~~~GAY~~s~~s~fN~~~~p~v~~~  372 (372)
T 2nva_A          326 GVDVINHNVALPELHIGDWVYFPSWGAYTNVLTTSFNGFGEYDVYYI  372 (372)
T ss_dssp             TTCEEEEEEEEECCCTTCEEEESSCCSSSGGGCCCGGGCCCEEEEEC
T ss_pred             CCCEECCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCEEEC
T ss_conf             47588866317999999999885945234845387889899817969