HHsearch results for GI: 254780741 and protein with PDBid: 2o0t_A
>2o0t_A Diaminopimelate decarboxylase; PLP binding enzyme, lysine biosynthesis, structural genomics, TB structural genomics consortium; HET: LLP; 2.33A {Mycobacterium tuberculosis H37RV} PDB: 1hkv_A* 1hkw_A
Probab=100.00 E-value=0 Score=553.38 Aligned_cols=361 Identities=15% Similarity=0.211 Sum_probs=302.3
Q ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCEEEEECHHHHHHHHC-CCCCCCEEEC-CC
Q ss_conf 885689779999999999999853369869995410599999999985187489807999989873-6880108853-77
Q gi|254780741|r 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYN-VA 80 (367)
Q Consensus 3 ~TP~yv~d~~~i~~n~~~~~~~~~~~~~~i~yA~KaN~~~~il~~l~~~g~g~dv~S~~E~~la~~-g~~~~~i~~~-~~ 80 (367)
+|||||||++.|++|+++|+.++. ++++++||+||||++.|++++.+.|+|+||+|++|+++|++ |+++++|+|+ |.
T Consensus 41 GTP~yV~d~~~i~~n~~~l~~af~-~~~~i~yAvKaN~~~~vl~~l~~~G~G~dvaS~~El~~al~~G~~~~~Ii~~gp~ 119 (467)
T 2o0t_A 41 GTPLFVIDEDDFRSRCRETAAAFG-SGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHASFPPERITLHGNN 119 (467)
T ss_dssp CSSEEEEEHHHHHHHHHHHHHHTS-SGGGBEEEGGGCCCHHHHHHHHHHTCEEEECSHHHHHHHHHTTCCGGGEEECCTT
T ss_pred CCCEEEEEHHHHHHHHHHHHHHCC-CCCEEEEEECCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 999899889999999999998568-9987999874288799999999819979998999999999759893329991898
Q ss_pred CCHHHHHHHHCCC-CEEEECCCHHHHHHHHHHHCCCC--CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHH-------
Q ss_conf 7803478861388-68985672059999998612345--6148996357744310124557864357427888-------
Q gi|254780741|r 81 YKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDK------- 150 (367)
Q Consensus 81 ~~~~el~~a~~~~-~~i~iDs~~El~~i~~~a~~~~~--~I~lRinP~~~~~~~~~~~~~~~~skfG~~~~~~------- 150 (367)
|++++++.++..+ ..+++||++|++++.+++++.+. +|++|+||++....+....++...||||+...+.
T Consensus 120 k~~~~l~~a~~~gv~~i~iDs~~El~~l~~~~~~~~~~~~v~lrl~~~~~~~~~~~~~~~~~~skfG~~~~~~~~~~~~~ 199 (467)
T 2o0t_A 120 KSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVR 199 (467)
T ss_dssp CCHHHHHHHHHHTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEEECSEEEEETEEEEESSCCSSSSEETTTTHHHHHHH
T ss_pred CCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99999998775043258846789999999987763987413453204766555422346645565576501567899999
Q ss_pred --HHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH--------HHCCCCCEEEEECCCCCCCCC----CCCCHHHHH
Q ss_conf --874314960665305656661478999999999898--------650887508753377666445----568078999
Q gi|254780741|r 151 --IESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF--------GHFITQIEWISLGGGIHFTDK----DYPVKDFCQ 216 (367)
Q Consensus 151 --~~~~~~~i~Gih~H~gs~~~~~~~~~~~l~~~~~~~--------~~~~~~l~~idiGGG~~~~~~----~~~~~~~~~ 216 (367)
.+....++.|+|||+|||+.+.+.|.+.+..+.+++ .+.+..+++||+||||++++. ..+++.+++
T Consensus 200 ~~~~~~~~~l~Glh~H~gs~~~d~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ld~GGG~~~~~~~~~~~~~~~~~~~ 279 (467)
T 2o0t_A 200 RVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 279 (467)
T ss_dssp HHHHCSSEEEEEEECCCEEEECCSHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCEEECCCCBCCCSSTTCCCCCHHHHHH
T ss_pred HHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99735698577898863888787088999999999988889986567507563210331786746777788887789999
Q ss_pred HHHHHHH----HC---CCEEEEEHHHHCCCCCEEEEEEEEEEEC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9998754----21---6504530022014574188878878630------443334333356565664001345530002
Q gi|254780741|r 217 RLKEFSE----KY---SVQIYLEPGEAIVTNTTTLNTTVLDISE------NIKNLVIVDSSVEAHVPDYLLYQESATIYP 283 (367)
Q Consensus 217 ~i~~~~~----~~---~~~l~iEPGR~lv~~ag~lv~~V~~~K~------~~~~~v~vd~g~~~~~~~~~~~~~~~~~~~ 283 (367)
.+....+ .. ++++++||||++|++||.++++|..+|. ++++|+++|+|++++++++++..+++....
T Consensus 280 ~~~~~~~~~~~~~~~~~~~l~~EPGR~lv~~ag~llt~V~~~~~~~~~~~~~~~~~~vdag~~~~~~~~~~~~~~~~~~~ 359 (467)
T 2o0t_A 280 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLV 359 (467)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEBCCSHHHHSTTEEEEEEEEEEEEEECSSSCEEEEEEESCCTTTCCHHHHHCCCCCEEEC
T ss_pred HHHHHHHHHHHHCCCCCCEEEECCCEEEEECCEEEEEEEEEEEEEECCCCCCEEEEEECCCCCCCCCHHHHCCCCCEEEC
T ss_conf 99999998753205767508986630786544799999999974202323765899988765456685671875634852
Q ss_pred ----CCCCEEEEEECCCCCCCCEEEECCCCC-CCCCCCEEEEECCCCHHHHHCCCCCCCCCCEEEEEECCCCEEEEE-EC
Q ss_conf ----478645998623336664552135667-788798999968870223243476899887799996799099997-38
Q gi|254780741|r 284 ----NTGPYTAMVCGRSCLAGDIFGEFHFEK-PVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR-EF 357 (367)
Q Consensus 284 ----~~~~~~~~v~G~~C~~~D~l~~~~~~~-~l~~GD~l~i~~~GAY~~~~~~~Fn~~~~P~~v~~~~~g~~~~~r-~e 357 (367)
+....++.|+||||+++|+|+.+..+| ++++||+|+|.|||||+++|+++||++|+|++|+++ +|+.++|| ||
T Consensus 360 ~~~~~~~~~~~~v~G~tC~~~D~l~~~~~lP~~l~~GD~l~f~~~GAY~~~~s~~fN~~~~P~~v~v~-~g~~~lir~re 438 (467)
T 2o0t_A 360 SRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVH-AGNARLVLRRE 438 (467)
T ss_dssp SSCCCSCEEEEEEECSSSSTTCEEEEEEEEETTCCTTCEEEESCCSSSSSTTCBCGGGCCCCEEEEEE-TTEEEEEECCC
T ss_pred CCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCEEEEE-CCEEEEEECCC
T ss_conf 57788982699999658799879925656888899999999859213247774836589998389999-99699998889
Q ss_pred CHHHHHHH
Q ss_conf 98999874
Q gi|254780741|r 358 SYNDYYNN 365 (367)
Q Consensus 358 ~~~d~~~~ 365 (367)
|+||++++
T Consensus 439 t~ed~~~~ 446 (467)
T 2o0t_A 439 TVDDLLSL 446 (467)
T ss_dssp CHHHHHTT
T ss_pred CHHHHHHH
T ss_conf 99999853