HHsearch results for GI: 254780741 and protein with PDBid: 3nzp_A
>3nzp_A Arginine decarboxylase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: PLP; 3.00A {Campylobacter jejuni subsp}
Probab=100.00 E-value=0 Score=432.84 Aligned_cols=363 Identities=19% Similarity=0.224 Sum_probs=282.7
Q ss_pred CCCCEEEEEHHHHHHHHHHHHHHHHH--------CCCEEEEEEECCCCHHHHHHHHHHC----CEEEEECHHHHHHHHC-
Q ss_conf 88856897799999999999998533--------6986999541059999999998518----7489807999989873-
Q gi|254780741|r 2 IKTPYYLIDKQKLLNNLDTALYIRKN--------AGVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHE- 68 (367)
Q Consensus 2 i~TP~yv~d~~~i~~n~~~~~~~~~~--------~~~~i~yA~KaN~~~~il~~l~~~g----~g~dv~S~~E~~la~~- 68 (367)
.+||+||+|++.|++|+++++.+|.. .+++.+||+||||++.|++.+...| +|+||+|.+|+.+|++
T Consensus 43 ~gtPl~v~~~dil~~ri~~l~~aF~~A~~~~~y~g~y~~~YAvKaN~~~~Vl~~l~~~G~~~~~GlEv~S~~EL~~Al~~ 122 (619)
T 3nzp_A 43 YKGPLLLRFPHLIQKQIENIYGNFNKARKEFGYKGGFNAVYPLKVNQYPGFVKNLVKLGKDYNYGLEAGSKAELLLAMAY 122 (619)
T ss_dssp CCSCEEEECHHHHHHHHHHHHHHHHHHHHHTTCCSCEEEEEEGGGCCCHHHHHHHHHHTGGGTCEEEECSHHHHHHHHHH
T ss_pred CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHC
T ss_conf 99988997089999999999999999999808788818998862489999999999837425881899799999999967
Q ss_pred CCCCCCEEECCCCCHHHHHH-----HHCCCCEEEECCCHHHHHHHHHHHCC---CCCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 68801088537778034788-----61388689856720599999986123---45614899635774431012455786
Q gi|254780741|r 69 KFGGETHAYNVAYKDCEIDA-----VLSNCDTIIFNTVSQLNKFKDKAQKL---HKKIGLRINPSVSYSKFILADPNRPF 140 (367)
Q Consensus 69 g~~~~~i~~~~~~~~~el~~-----a~~~~~~i~iDs~~El~~i~~~a~~~---~~~I~lRinP~~~~~~~~~~~~~~~~ 140 (367)
|+++++|++||.++++.++. .+..+.+|++||++||+++.+++++. ..+|++|+||.. .+++....+|+..
T Consensus 123 g~~~~~Ii~nG~kk~e~~~~a~l~~~l~~~v~ivvDs~~EL~~I~~~a~~~~~~~~~IglRi~~~~-~~~~~~~~tgg~~ 201 (619)
T 3nzp_A 123 NNEGAPITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHS-AGVGIWAKSGGIN 201 (619)
T ss_dssp SCTTSEEEECSCCCHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTSCSCCCEEEEEBCCTT-C------------
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCEEECCCC-CCCCCCCCCCCCC
T ss_conf 989897998997885999999998611888488879999999999999985499876521323675-5667422468875
Q ss_pred CCCCCCHHHHHHHH--------HCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHC----CCCCEEEEECCCCCCCCC-
Q ss_conf 43574278888743--------14960665305656661478999999999898650----887508753377666445-
Q gi|254780741|r 141 SRLGEKCKDKIESE--------IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHF----ITQIEWISLGGGIHFTDK- 207 (367)
Q Consensus 141 skfG~~~~~~~~~~--------~~~i~Gih~H~gs~~~~~~~~~~~l~~~~~~~~~~----~~~l~~idiGGG~~~~~~- 207 (367)
||||++..++.+.. ..++.|+|||+|||+.+.+.|+++++.+.+++.++ ++++++|||||||+++|.
T Consensus 202 SKFGl~~~ei~~~i~~l~~~~~l~~l~GlHfHiGSQi~d~~~~~~al~~~~~l~~el~~~g~~~l~~LDIGGGlgV~Y~~ 281 (619)
T 3nzp_A 202 SKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQITEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGGLAVEYSQ 281 (619)
T ss_dssp -CCSBCHHHHHHHHHHHHHTTCTTTEEEEECCCCSCBCCSHHHHHHHHHHHHHHHHHHHTTCTTCCEEEEESCBCCCCCC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCC
T ss_conf 65786378899999999865776706899982587756489999999999999999887489776187504876757864
Q ss_pred -------CCCCHHHHHH----HHHHHHHC---CCEEEEEHHHHCCCCCEEEEEEEEEEECC-CCCCCCCCCCCCCCCCCC
Q ss_conf -------5680789999----99875421---65045300220145741888788786304-433343333565656640
Q gi|254780741|r 208 -------DYPVKDFCQR----LKEFSEKY---SVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDY 272 (367)
Q Consensus 208 -------~~~~~~~~~~----i~~~~~~~---~~~l~iEPGR~lv~~ag~lv~~V~~~K~~-~~~~v~vd~g~~~~~~~~ 272 (367)
+++++++++. ++++++++ +++|++||||||||+||++|++|+++|++ +.+++++|+|++++++|.
T Consensus 282 ~~~~~s~~y~l~eya~~Iv~~~~~~~~~~~~~~p~Ii~EPGRalVA~agvLVt~Vi~vK~~~~~~~~~vd~g~~~~lrp~ 361 (619)
T 3nzp_A 282 FKNEKSRNYTLREYANDVVFILKNIAEQKKDLEPDIFIESGRFVAANHAVLIAPVLELFSQEYAENKLILKKQNPKLIDE 361 (619)
T ss_dssp SSSCCSCSSCHHHHHHHHHHHHHHHHHHTTCCCCEEEECCCHHHHGGGEEEEEEEEEEECCCCCGGGSCCCSSCCHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCEEEEEEEEEEEECCCCCEEEECCCCCCHHHHH
T ss_conf 22234454329999999999999999980899973999257888630428999999997248875246327777167799
Q ss_pred CCCCCCC-------------------------------------------------------------------------
Q ss_conf 0134553-------------------------------------------------------------------------
Q gi|254780741|r 273 LLYQESA------------------------------------------------------------------------- 279 (367)
Q Consensus 273 ~~~~~~~------------------------------------------------------------------------- 279 (367)
++..++.
T Consensus 362 Ly~~~h~i~~~~~~E~~~da~~~~~~~~~~f~~g~l~l~~ra~~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~ 441 (619)
T 3nzp_A 362 LYDLYKSIKPSNALEYLHDSIDHLESILTLFDLGYVDLQDRSNAEILTHLITKKAILLLGDKQNPADLLAIQDEVQERYL 441 (619)
T ss_dssp HHHHHHHCCTTTHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHCC-------------CCSBEEE
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHE
T ss_conf 99988734866147899999999999999996488789999999999999999998750356793777777777776624
Q ss_pred -------------------CCCC----C-CCCEEEEEECCCCCCCCEEEEC----CCCCCCCCCC---EEEEECCCCHHH
Q ss_conf -------------------0002----4-7864599862333666455213----5667788798---999968870223
Q gi|254780741|r 280 -------------------TIYP----N-TGPYTAMVCGRSCLAGDIFGEF----HFEKPVKIGD---RISFEDVAGYNI 328 (367)
Q Consensus 280 -------------------~~~~----~-~~~~~~~v~G~~C~~~D~l~~~----~~~~~l~~GD---~l~i~~~GAY~~ 328 (367)
.++| + +......+++-||+|.+.+-.. ..++++..++ +|.|..+|||+.
T Consensus 442 ~NfS~fqslpD~Wai~Q~fpi~Pi~rl~e~p~~~~~l~diTCDSDg~i~~~~~~~l~lh~~~~~~e~y~lg~Fl~GAYQe 521 (619)
T 3nzp_A 442 VNFSLFQSMPDFWGLEQNFPIMPLDRLDEEPTRSASIWDITCDSDGEISYSKDKPLFLHDVDVEKENYFLGFFLVGAYQE 521 (619)
T ss_dssp ESSCTTTTCHHHHHSSCCCCEEESSCTTSCCCCBBCCEESCSCTTSBCCCCSSSCCBCCCCCTTTSCCEEEECSCSSSTT
T ss_pred ECHHHHCCCCCHHHHCCCCEEEEHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHH
T ss_conf 12034305740565446442624523688863479981577389996444566775578878899860899984448679
Q ss_pred HHCCCCCCCCCCEEEEE--ECCCCEEEE---EECCHHHHHHHC
Q ss_conf 24347689988779999--679909999---738989998742
Q gi|254780741|r 329 NRKNWFNGINMPTIAVK--NVDGTIKAI---REFSYNDYYNNL 366 (367)
Q Consensus 329 ~~~~~Fn~~~~P~~v~~--~~~g~~~~~---r~e~~~d~~~~~ 366 (367)
.|+...|-++.|.+|.+ +++| ..+. +.+|.+|+++-+
T Consensus 522 ~lg~~HnLfg~~~~v~v~~~~~g-~~~~~~~~g~~~~~vl~~~ 563 (619)
T 3nzp_A 522 VLGMKHNLFTHPTEAIISINEKG-YEVEGIIEAQSILDTLEDL 563 (619)
T ss_dssp TTCCCTTSCCCCEEEEEEECSSC-EEEEEEECCCCHHHHHHHT
T ss_pred HHHHCCCCCCCCCEEEEEECCCC-CEEEEEECCCCHHHHHHHC
T ss_conf 87435366899988999977997-4898852688899999873