PSIBLAST alignment of GI: 254780741 and protein with PDB id: 1hkw

>gi|29726282|pdb|1HKW|A Chain A, Mycobacterium Diaminopimelate Dicarboxylase (Lysa) Length = 453
>gi|29726283|pdb|1HKW|B Chain B, Mycobacterium Diaminopimelate Dicarboxylase (Lysa) Length = 453
 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 53/406 (13%), Positives = 119/406 (29%), Gaps = 45/406 (11%)

Query: 3   KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
            TP ++ID+    +           +G  +  A K F    +   +++        +  E
Sbjct: 39  GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 97

Query: 63  VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
           + +     F  E    +   K       AV +    I+ ++ +++ +    A +    + 
Sbjct: 98  LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSXTEIERLDAIAGEAGIVQD 157

Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVNGLMFHNNCE 168
           + +R+   V               + G                  +   + GL  H   +
Sbjct: 158 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAXAAVRRVFATDHLRLVGLHSHIGSQ 217

Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
                 F          +    G F  +    I  + LGGG+  +            L  
Sbjct: 218 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 277

Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
                           + ++ +EPG AI    T     V  + +   +            
Sbjct: 278 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 337

Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
               ++   L   +      +   +  P  A + G+ C +GDI     +    ++ GD +
Sbjct: 338 GXSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLV 397

Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
           +      Y  +  + +N +  P +   +       +R  + +D  +
Sbjct: 398 AVAATGAYCYSLSSRYNXVGRPAVVAVHAGNARLVLRRETVDDLLS 443