PSIBLAST alignment of GI: 254780741 and protein with PDB id: 1hkw
>gi|29726282|pdb|1HKW|A Chain A, Mycobacterium Diaminopimelate Dicarboxylase (Lysa) Length = 453
>gi|29726283|pdb|1HKW|B Chain B, Mycobacterium Diaminopimelate Dicarboxylase (Lysa) Length = 453
Score = 199 bits (507), Expect = 4e-49, Method: Composition-based stats.
Identities = 53/406 (13%), Positives = 119/406 (29%), Gaps = 45/406 (11%)
Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
TP ++ID+ + +G + A K F + +++ + E
Sbjct: 39 GTPLFVIDEDDFRSRCRETAAAF-GSGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGE 97
Query: 63 VMLGH-EKFGGETHAYNVAYKDCEI--DAVLSNCDTIIFNTVSQLNKFKDKAQKL--HKK 117
+ + F E + K AV + I+ ++ +++ + A + +
Sbjct: 98 LAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSXTEIERLDAIAGEAGIVQD 157
Query: 118 IGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---------EIKNVNGLMFHNNCE 168
+ +R+ V + G + + GL H +
Sbjct: 158 VLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAXAAVRRVFATDHLRLVGLHSHIGSQ 217
Query: 169 NKSFLCFSAMLK----NIEKEFGHFITQ----IEWISLGGGIHFTDKDYPVKDFCQRLKE 220
F + G F + I + LGGG+ + L
Sbjct: 218 IFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 277
Query: 221 FSEKY-----------SVQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSS----- 264
+ ++ +EPG AI T V + + +
Sbjct: 278 KLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDG 337
Query: 265 -VEAHVPDYLLYQES----ATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKP-VKIGDRI 318
++ L + + + P A + G+ C +GDI + ++ GD +
Sbjct: 338 GXSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLV 397
Query: 319 SFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYYN 364
+ Y + + +N + P + + +R + +D +
Sbjct: 398 AVAATGAYCYSLSSRYNXVGRPAVVAVHAGNARLVLRRETVDDLLS 443