RPSBLAST alignment of GI: 254780741 and protein with PDBid: 1knw
>1knw_A Diaminopimelate decarboxylase; pyridoxal-phosphate, decarboxylation, lysine, TIM-barrel, lyase; HET: PLP MES; 2.10A {Escherichia coli} SCOP: b.49.2.3 c.1.6.1 PDB: 1ko0_A* Length = 425
Score = 110 bits (275), Expect = 5e-25
Identities = 57/402 (14%), Positives = 123/402 (30%), Gaps = 50/402 (12%)
Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
P ++ D Q + + + A K + + + + S SL E+
Sbjct: 26 CPVWVYDAQIIRRQIAAL-----KQFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEI 80
Query: 64 ML------GHEKFGGETHAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKK 117
+ + ++ V + +V L++ + +
Sbjct: 81 ERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPVNAGSVDMLDQLGQVSPG--HR 138
Query: 118 IGLRINPSVSYSKFILADPNRPFSRLG------EKCKDKIESEIKNVNGLMFH--NNCEN 169
+ LR+NP + + S+ G D I+ + G+ H + +
Sbjct: 139 VWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDY 198
Query: 170 KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHF-------TDKDYPVKDFCQRLKEFS 222
+ EFG + I + T+ Y + + +
Sbjct: 199 AHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARH 258
Query: 223 EKYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATI 281
+ V++ +EPG +V + L T V + + ++ V+VD+ + +Y I
Sbjct: 259 LGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHFVLVDAGF-NDLMRPAMYGSYHHI 317
Query: 282 YP---------NTGPYTAMVCGRSCLAGDIFGEFHFEK-------PVKIGDRISFEDVAG 325
+ +V G C +GD+F + VK GD + D
Sbjct: 318 SALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGA 377
Query: 326 YNINRKNWFNGINMP-TIAVKNVDGTIKAIRE-FSYNDYYNN 365
Y + + +N + + +G + IR + +
Sbjct: 378 YGASMSSNYNSRPLLPEVLFD--NGQARLIRRRQTIEELLAL 417