RPSBLAST alignment of GI: 254780741 and protein with PDBid: 2oo0
>2oo0_A ODC, ornithine decarboxylase; beta-alpha barrel, sheet, lyase; HET: PLP; 1.90A {Homo sapiens} Length = 471
Score = 94.2 bits (233), Expect = 5e-20
Identities = 69/392 (17%), Positives = 124/392 (31%), Gaps = 35/392 (8%)
Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
K +Y+ D +L +++ V A+KC + + TL G +S E
Sbjct: 47 KDAFYVADLGDILKKHLR--WLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTE 104
Query: 63 VMLGHE-KFGGETHAYNVAYKD-CEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGL 120
+ L E Y K +I +N ++ S++ K K+ L
Sbjct: 105 IQLVQSLGVPPERIIYANPCKQVSQIKYAANNGVQMM-TFDSEVELMKVARAHPKAKLVL 163
Query: 121 RINPSVSYSKFILADPNRPFSRLGEKCKDKIESEIKNVNGLMFHNNCENKSFLCFSAMLK 180
RI S + L+ R ++ + +V G+ FH F +
Sbjct: 164 RIATDDSKAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAIS 223
Query: 181 NIEKEF------GHFITQIEWISLGGGIHFTDKD---YPVKDFCQRLKEFSEKYSVQIYL 231
+ F G + ++ G K F V+I
Sbjct: 224 DARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIA 283
Query: 232 EPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESAT----------- 280
EPG V + TL ++ +K D E+ ++ Y
Sbjct: 284 EPGRYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDH 343
Query: 281 ----------IYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINR 330
P+ Y++ + G +C D E + +GD + FE++ Y +
Sbjct: 344 AHVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAA 403
Query: 331 KNWFNGINMPTIAVKNVDGTIKAIREFSYNDY 362
+ FNG PTI + +++F D+
Sbjct: 404 ASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDF 435