RPSBLAST alignment of GI: 254780741 and protein with PDBid: 2p3e
>2p3e_A Diaminopimelate decarboxylase; southeast collaboratory for structural genomics, riken spring-8 center, riken genomic sciences center; 1.99A {Aquifex aeolicus VF5} Length = 420
Score = 113 bits (282), Expect = 8e-26
Identities = 69/386 (17%), Positives = 131/386 (33%), Gaps = 27/386 (6%)
Query: 4 TPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEV 63
TP Y+ + + Y + + A+K + L + G S E+
Sbjct: 34 TPLYVYSSNFIKERFEA--YRKAFPDALICYAVKANFNPHLVKLLGELGAGADIVSGGEL 91
Query: 64 MLGHEKFGGETH---AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHK--KI 118
L + A + DAV S + +L+ + A KL K +I
Sbjct: 92 YLAKKAGIPPERIVYAGVGKTEKELTDAVDSEILMFNVESRQELDVLNEIAGKLGKKARI 151
Query: 119 GLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-----EIKNVNGLMFHNNCENKSF- 172
+R+NP V S+ G ++ + +++N+ + H + ++
Sbjct: 152 AIRVNPDVDPKTHPYIATGMQKSKFGVDIREAQKEYEYASKLENLEIVGIHCHIGSQILD 211
Query: 173 --LCFSAMLKNIEKEFGHFITQIEWISLGGGI------HFTDKDYPVKDFCQRLKEFSEK 224
A+ K + + L G DK+ +D LK+ E
Sbjct: 212 ISPYREAVEKVVSLYESLTQKGFDIKYLDIGGGLGIKYKPEDKEPAPQDLADLLKDLLEN 271
Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIY- 282
+I LEPG +I+ N L T V + + K+ +IVD+ + + + I
Sbjct: 272 VKAKIILEPGRSIMGNAGILITQVQFLKDKGSKHFIIVDAGMNDLIRPSIYNAYHHIIPV 331
Query: 283 --PNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMP 340
A + G C GD + V+ G+ ++ Y + +N
Sbjct: 332 ETKERKKVVADIVGPICETGDFLALDREIEEVQRGEYLAVLSAGAYGFAMSSHYNMRPRA 391
Query: 341 TIAVKNVDGTIKAIREF-SYNDYYNN 365
+ +G++K IR+ +Y+
Sbjct: 392 AEVLVE-NGSVKLIRKRENYDYIVEP 416