HHsearch alignment for GI: 254780742 and conserved domain: PRK00421
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional.
Probab=96.38 E-value=0.051 Score=32.35 Aligned_cols=87 Identities=10% Similarity=0.150 Sum_probs=53.9
Q ss_pred CEEEEECCCHHHH-HHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 3199984987799-999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 3 KNVLIIGAGGVAH-VVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 3 k~ilv~GaG~vG~-~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
T Consensus 9 k~ih~iGigG~GmsalA~~l~~~G-~--~V~gsD~~~~~~~---~~L~~-------~Gi~v~~--g~~~~~l----~--~ 67 (459)
T PRK00421 9 KRIHFVGIGGIGMSGLAEVLLNLG-Y--KVSGSDLKESAVT---QRLLE-------LGAIIFI--GHDAENI----K--G 67 (459)
T ss_pred CEEEEEEECHHHHHHHHHHHHHCC-C--EEEEECCCCCHHH---HHHHH-------CCCEEEC--CCCHHHC----C--C
T ss_conf 889999866888999999999689-9--3999889899789---99997-------8799977--9897987----9--9
Q ss_pred CCEEEECCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf 72999737610032789999862886896
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRACIDSNVAYID 110 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a~i~~g~hyvD 110 (419)
T Consensus 68 ~d~vV~Sp~I~~~~p~~~~a~~~gi~v~~ 96 (459)
T PRK00421 68 ADVVVVSSAIKPDNPELVAARELGIPVVR 96 (459)
T ss_pred CCEEEECCCCCCCCHHHHHHHHCCCCEEE
T ss_conf 99999899859989999999987997988