HHsearch alignment for GI: 254780742 and conserved domain: PRK01390
>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=96.40 E-value=0.016 Score=35.71 Aligned_cols=85 Identities=14% Similarity=0.189 Sum_probs=51.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
T Consensus 9 gk~v~v~GlG~sG~s~a~~L~~~G---~~V~~~D~~~~~~~~~~~~-----------g~~~~--~~~~~~-----~~--~ 65 (457)
T PRK01390 9 GKTVALFGLGGSGLATARALKAGG---AEVIAWDDNPDSVAKAAAA-----------GIATA--DLRTAD-----WS--Q 65 (457)
T ss_pred CCEEEEEEECHHHHHHHHHHHHCC---CEEEEEECCCHHHHHHHHC-----------CCCCC--CCCCCC-----CC--C
T ss_conf 998999943699999999999789---9799993992066899875-----------98314--554123-----20--3
Q ss_pred CC-EEEECCCCCCCHH---HHHHHHHCCCCEE
Q ss_conf 72-9997376100327---8999986288689
Q gi|254780742|r 82 SQ-IIINVGSSFLNMS---VLRACIDSNVAYI 109 (419)
Q Consensus 82 ~d-vVin~~~p~~~~~---v~~a~i~~g~hyv 109 (419)
T Consensus 66 ~~~iV~SPGIp~~~p~~~~~v~~a~~~gi~v~ 97 (457)
T PRK01390 66 FAALVLSPGVPLTHPKPHWTVDLARAAGVEVI 97 (457)
T ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHCCCEEE
T ss_conf 87899999888656673199999998599186