HHsearch alignment for GI: 254780742 and conserved domain: PRK02472
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=96.96 E-value=0.0082 Score=37.73 Aligned_cols=91 Identities=11% Similarity=0.217 Sum_probs=53.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
T Consensus 10 k~i~viGlG~sG~s~a~~L~~~G---~~V~~~D~~~~~~~~~~~~l~~-------~gi~~~~-g-~~~~~---~~~~-~~ 73 (450)
T PRK02472 10 KKVLVLGLAKSGYAAAKLLHKLG---ANVTVNDGKPFSENPAAQELLE-------EGIKVIC-G-SHPLE---LLDE-NF 73 (450)
T ss_pred CEEEEEEECHHHHHHHHHHHHCC---CEEEEEECCCCCCCHHHHHHHH-------CCCEEEE-C-CCHHH---HCCC-CC
T ss_conf 98999977899999999999886---9899984886657989999996-------7998997-8-88078---6057-88
Q ss_pred CEEE-ECCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf 2999-737610032789999862886896
Q gi|254780742|r 83 QIII-NVGSSFLNMSVLRACIDSNVAYID 110 (419)
Q Consensus 83 dvVi-n~~~p~~~~~v~~a~i~~g~hyvD 110 (419)
T Consensus 74 d~vV~SPgI~-~~~p~~~~a~~~~i~v~~ 101 (450)
T PRK02472 74 DLMVKNPGIP-YDNPMVEEALEKGIPIIT 101 (450)
T ss_pred CEEEECCCCC-CCCHHHHHHHHCCCCEEE
T ss_conf 7999899879-999999999986996743