HHsearch alignment for GI: 254780742 and conserved domain: PRK03369
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=97.26 E-value=0.0039 Score=39.91 Aligned_cols=87 Identities=14% Similarity=0.117 Sum_probs=55.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
T Consensus 12 Gk~V~V~GlG~sG~a~a~~L~~~G---~~v~~~D~~~~~~~~~~~~-----------~~~~~~--~~~~~---~~~~--~ 70 (487)
T PRK03369 12 GAPVLVAGAGVTGRAVLAALTRFG---ARPTVCDDDPDALRPHAER-----------GVATVS--SSDAV---QQIA--D 70 (487)
T ss_pred CCEEEEEEECHHHHHHHHHHHHCC---CEEEEEECCCHHHHHHHHC-----------CCCEEC--CCCCH---HHHC--C
T ss_conf 898999915683899999999786---9799998982577999865-----------994863--76226---5646--7
Q ss_pred CCEEEECCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 7299973761003278999986288689
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRACIDSNVAYI 109 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a~i~~g~hyv 109 (419)
T Consensus 71 ~d~vV~SPGI~~~~p~l~~a~~~gi~i~ 98 (487)
T PRK03369 71 YALVVTSPGFPPTAPVLAAAAAAGVPIW 98 (487)
T ss_pred CCEEEECCCCCCCCHHHHHHHHCCCCEE
T ss_conf 7889989957998999999998899076