HHsearch alignment for GI: 254780742 and conserved domain: PRK04690
>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=95.88 E-value=0.09 Score=30.70 Aligned_cols=91 Identities=8% Similarity=0.032 Sum_probs=52.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 73199984987799999999960898725999639999999999873430245555573089943789899999997539
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTN 81 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~ 81 (419)
T Consensus 8 gkkv~V~GlG~sG~aaa~~L~~~g~~--~~v~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~-~~~----l~--~ 69 (468)
T PRK04690 8 GKRVALWGWGREGRAAYRALRAQLPA--QPLTVFCNAEEVREVG-ALAD--------AALLVETEAS-AQR----LA--A 69 (468)
T ss_pred CCEEEEEEECHHHHHHHHHHHHCCCE--EEEEECCCCCCCHHHH-HHCC--------CCCEEECCCC-HHH----HH--C
T ss_conf 79799983478799999999966990--4999728832464667-6204--------5756746778-557----61--4
Q ss_pred CCEEEECCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf 72999737610032789999862886896
Q gi|254780742|r 82 SQIIINVGSSFLNMSVLRACIDSNVAYID 110 (419)
Q Consensus 82 ~dvVin~~~p~~~~~v~~a~i~~g~hyvD 110 (419)
T Consensus 70 ~d~vv~SPGi~~~~p~~~~a~~~~i~i~~ 98 (468)
T PRK04690 70 FEVVVKSPGISPYRPEALAAAAQGTPFIG 98 (468)
T ss_pred CCEEEECCCCCCCCHHHHHHHHCCCCEEE
T ss_conf 88999899579868999999987994886