HHsearch alignment for GI: 254780742 and conserved domain: PRK05472
>PRK05472 redox-sensing transcriptional repressor Rex; Provisional.
Probab=97.22 E-value=0.003 Score=40.71 Aligned_cols=90 Identities=17% Similarity=0.201 Sum_probs=68.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
T Consensus 85 ~~v~lvGaGnLG~AL~~y~gf~~~gf~Iva~FD~dp~kiG~-----------------~i~gi~V~~i~~L~~~i~~~~i 147 (211)
T PRK05472 85 TNVALVGAGNLGRALLNYNGFKKRGFKIVAAFDVDPEKVGT-----------------KIGGIPVYHIDELEEVIKENDI 147 (211)
T ss_pred CEEEEECCCHHHHHHHHCCCHHHCCCEEEEEECCCHHHCCC-----------------EECCEEEECHHHHHHHHHHHCC
T ss_conf 50899888779999984876231897899997489788598-----------------8388387349999999998199
Q ss_pred CEEEECCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 299973761003278999986288689
Q gi|254780742|r 83 QIIINVGSSFLNMSVLRACIDSNVAYI 109 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~a~i~~g~hyv 109 (419)
T Consensus 148 ~iaIiaVP~~~AQ~vad~Lv~aGIk~I 174 (211)
T PRK05472 148 EIAILTVPAEAAQEVADRLVEAGIKGI 174 (211)
T ss_pred CEEEEECCHHHHHHHHHHHHHHCCEEE
T ss_conf 389995576889999999998198399