HHsearch alignment for GI: 254780742 and conserved domain: PRK05708

Probab=97.16  E-value=0.0026  Score=41.10  Aligned_cols=87  Identities=14%  Similarity=0.117  Sum_probs=52.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf             97319998498779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r    1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT   80 (419)
Q Consensus         1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~   80 (419)
T Consensus         1 m~MkI~IiGaGAiG~~~a~~L~~ag~---dV~lv~r~~~~~~~~~~~g~~~~--~~~~~~~~~~v~~~~~~~----~~--   69 (305)
T PRK05708          1 MSMTWHILGAGSLGSLWACRLARAGL---PVRLILRDRQRLAAYQQAGGLTL--VEQGQASLYAIPAETADA----PE--   69 (305)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC---CEEEEEECHHHHHHHHHCCCEEE--EECCCEEEEECCCCCCCC----CC--
T ss_conf             99889998823999999999984899---73999947899999997899899--868955787404657665----78--


Q ss_pred             CCCEEEECCCCCCCHHHH
Q ss_conf             972999737610032789
Q gi|254780742|r   81 NSQIIINVGSSFLNMSVL   98 (419)
Q Consensus        81 ~~dvVin~~~p~~~~~v~   98 (419)
T Consensus        70 ~~D~vivavK~~~~~~a~   87 (305)
T PRK05708         70 PIHRLLVACKAYDAEPAV   87 (305)
T ss_pred             CCCEEEEEECCCCHHHHH
T ss_conf             877899980425689999