HHsearch alignment for GI: 254780742 and conserved domain: PRK07680
>PRK07680 late competence protein ComER; Validated.
Probab=97.38 E-value=0.0019 Score=41.98 Aligned_cols=92 Identities=17% Similarity=0.262 Sum_probs=63.1
Q ss_pred EEEEECCCHHHHHHHHHHHHCCC-CCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 19998498779999999996089-87259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNND-ILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~-~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
T Consensus 2 kI~fIG~GnMg~Aii~gl~~~~~~~~~~i~i~~r~~~~~~~l~~~~~---------~i~~----~~~~~---~~~~--~~ 63 (273)
T PRK07680 2 NIGFIGTGNMGTILIEAFLESRAVKPSCLTITNRTPAKAYHIKEKYP---------SIHV----AKTIE---EVIE--QS 63 (273)
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCC---------CEEE----ECCHH---HHHH--CC
T ss_conf 89998769999999999997799894569998899899999998769---------9088----68889---9984--09
Q ss_pred CEEEECCCCCCCHHHHHHH---HHCCCCEEEECC
Q ss_conf 2999737610032789999---862886896036
Q gi|254780742|r 83 QIIINVGSSFLNMSVLRAC---IDSNVAYIDTAI 113 (419)
Q Consensus 83 dvVin~~~p~~~~~v~~a~---i~~g~hyvD~s~ 113 (419)
T Consensus 64 dvIiLaVKPq~~~~vl~~i~~~~~~~~~iISi~A 97 (273)
T PRK07680 64 ELIFICVKPLDIYPLLKKLAPHFSDEKCLVSITS 97 (273)
T ss_pred CEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 9899964888899999998863478848999558