HHsearch alignment for GI: 254780742 and conserved domain: PRK08063

Probab=98.35  E-value=1e-05  Score=57.44  Aligned_cols=83  Identities=18%  Similarity=0.319  Sum_probs=67.3

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEE-ECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf             31999849-877999999999608987259996-3999999999987343024555557308994378989999999753
Q gi|254780742|r    3 KNVLIIGA-GGVAHVVAHKCAQNNDILGDINIA-SRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT   80 (419)
Q Consensus         3 k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va-~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~   80 (419)
T Consensus         5 KvalVTGas~GIG~aia~~la~~Ga---~Vvi~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~Dv~d~~~v~~~~~~~   76 (250)
T PRK08063          5 KVALVTGSSRGIGKAIALRLAKEGY---DIAINYARSRKAAEETANEIEQL-----GRKALVVKANVGDVEKIKEMFSQI   76 (250)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC---EEEEECCCCHHHHHHHHHHHHHC-----CCCEEEEECCCCCHHHHHHHHHHH
T ss_conf             9899958766999999999998899---89997599989999999999954-----995899984799999999999999


Q ss_pred             -----CCCEEEECCCCCC
Q ss_conf             -----9729997376100
Q gi|254780742|r   81 -----NSQIIINVGSSFL   93 (419)
Q Consensus        81 -----~~dvVin~~~p~~   93 (419)
T Consensus        77 ~~~~G~iDiLVnnAg~~~   94 (250)
T PRK08063         77 DEHFGRLDVFVNNAASGV   94 (250)
T ss_pred             HHHCCCCCEEEECCCCCC
T ss_conf             998099889998785678