HHsearch alignment for GI: 254780742 and conserved domain: PRK08229

Probab=97.25  E-value=0.0022  Score=41.62  Aligned_cols=92  Identities=13%  Similarity=0.182  Sum_probs=51.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCC-CCCCCCCEEEEEC-CCCHHHHHHHHH
Q ss_conf             97319998498779999999996089872599963999999999987343024-5555573089943-789899999997
Q gi|254780742|r    1 MKKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKS-LKIDGKLAIHQVD-ALNIKAVVELIK   78 (419)
Q Consensus         1 M~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~D-~~d~~~l~~~~~   78 (419)
T Consensus         1 ~mmkI~IiGaGAvG~~~a~~L~~aG~---~V~lv~r-~~~~~~i~~~Gl~i~~~~~~~~~~~~~~~~~~~~~~~~----~   72 (341)
T PRK08229          1 MMARICVLGAGSIGCYLGGRLAAAGA---DVTLIGR-ARIGDEIRAHGLRLTDYRGRDVRVPPDAIAFSTDPAAL----A   72 (341)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC---CEEEEEC-HHHHHHHHHCCCEEECCCCCEEEECCCEEEECCCHHHC----C
T ss_conf             94779998967999999999985899---8799956-78999999679099638997689636615614886565----8


Q ss_pred             HCCCCEEEECCCCCCCHHHHHHHH
Q ss_conf             539729997376100327899998
Q gi|254780742|r   79 KTNSQIIINVGSSFLNMSVLRACI  102 (419)
Q Consensus        79 ~~~~dvVin~~~p~~~~~v~~a~i  102 (419)
T Consensus        73 --~~D~viv~vKa~~~~~a~~~l~   94 (341)
T PRK08229         73 --TADLVLVTVKSAATADAAAALA   94 (341)
T ss_pred             --CCCEEEEEECCCCHHHHHHHHH
T ss_conf             --9998999707578899999998