HHsearch alignment for GI: 254780742 and conserved domain: PRK12548

>PRK12548 shikimate 5-dehydrogenase; Provisional.
Probab=98.51  E-value=3.4e-06  Score=60.55  Aligned_cols=135  Identities=18%  Similarity=0.284  Sum_probs=92.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCH---HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf             7319998498779999999996089872599963999---9999999873430245555573089943789899999997
Q gi|254780742|r    2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTL---QKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIK   78 (419)
Q Consensus         2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~   78 (419)
T Consensus       126 ~k~vlIlGaGGaa~ai~~~l~~~g~--~~i~i~nr~~~~~~ra~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  198 (289)
T PRK12548        126 GKKLTIIGAGGAATAIQVQCALDGA--KEITIFNIKDDFYERAEQTVAKIKEEV-----PACIVHVYDLNDTEKLNAEIA  198 (289)
T ss_pred             CCEEEEEECCHHHHHHHHHHHHCCC--CEEEEEECCCHHHHHHHHHHHHHHHHC-----CCCEEEEECCCCHHHHHHHHC
T ss_conf             7747999521679999999997699--889999688148899999999998458-----776479851431666655432


Q ss_pred             HCCCCEEEECCCCCC----C-HHHHH-HHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHH
Q ss_conf             539729997376100----3-27899-99862886896036642000014420000357751088885188699537501
Q gi|254780742|r   79 KTNSQIIINVGSSFL----N-MSVLR-ACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILGAGFD  152 (419)
Q Consensus        79 ~~~~dvVin~~~p~~----~-~~v~~-a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~~G~~  152 (419)
T Consensus       199 --~~dliINaT~~Gm~p~~~~~~~~~~~~~~~~~~v~D~vY~P~~T--------------~ll~~A~~~G~~~i~Gl---  259 (289)
T PRK12548        199 --TSDILVNATLVGMHPNEDETPIKDTSVFRKDLVVADTVYNPKKT--------------KLLEDAEAAGCKTVGGL---  259 (289)
T ss_pred             --CCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCC--------------HHHHHHHHCCCEEECHH---
T ss_conf             --26744533565668775568887866738897899831388478--------------99999998829685729---


Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             11488999999997
Q gi|254780742|r  153 PGVVNAFARLAQDE  166 (419)
Q Consensus       153 PGl~~lla~~~~~~  166 (419)
T Consensus       260 ----~MLv~Qa~~~  269 (289)
T PRK12548        260 ----GMLLWQGAEA  269 (289)
T ss_pred             ----HHHHHHHHHH
T ss_conf             ----9999999999