HHsearch alignment for GI: 254780742 and conserved domain: TIGR01181

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase; InterPro: IPR005888 The conversion of dTDP-glucose into dTDP-4-keto-6-deoxyglucose by Escherichia coli dTDP-glucose 4,6-dehydratase) takes place in the active site in three steps: dehydrogenation to dTDP-4-ketoglucose, dehydration to dTDP-4-ketoglucose-5,6-ene, and rereduction of C6 to the methyl group. The 4,6-dehydratase makes use of tightly bound NAD^+ as the coenzyme for transiently oxidizing the substrate, activating it for the dehydration step . This and other 4,6-dehydratases catalyze the first committed step in all 6-deoxysugar biosynthetic pathways described to date. Numerous 6-deoxysugars are used in bacterial lipopolysaccharide production as well as in the biosynthesis of a diverse array of secondary metabolites.; GO: 0008460 dTDP-glucose 46-dehydratase activity, 0009225 nucleotide-sugar metabolic process.
Probab=98.27  E-value=4.7e-06  Score=59.66  Aligned_cols=81  Identities=11%  Similarity=0.197  Sum_probs=60.7

Q ss_pred             EEEEE-CCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf             19998-49877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r    4 NVLII-GAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS   82 (419)
Q Consensus         4 ~ilv~-GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~   82 (419)
T Consensus         1 ~~LVTGGaGFIGsnFvry~~~~~~D-~~v~vlDk----LT-YAgn~e~L~~l~~~pr~~Fv~GDI~D~~lv~~~~~e~~~   74 (340)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPD-AEVIVLDK----LT-YAGNLENLADLEDNPRYRFVKGDIGDRELVDRLLKEHDP   74 (340)
T ss_pred             CCEEECCCCHHHHHHHHHHHHHCCC-CEEEEEEC----CC-CCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCC
T ss_conf             9236327852568999999974799-57998635----44-557865552332396615674230228899888400176


Q ss_pred             CEEEECCC
Q ss_conf             29997376
Q gi|254780742|r   83 QIIINVGS   90 (419)
Q Consensus        83 dvVin~~~   90 (419)
T Consensus        75 D~VvhFAA   82 (340)
T TIGR01181        75 DAVVHFAA   82 (340)
T ss_pred             CEEEECCC
T ss_conf             77886222