HHsearch alignment for GI: 254780742 and conserved domain: TIGR01809
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase; InterPro: IPR010110 This entry represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.; GO: 0004764 shikimate 5-dehydrogenase activity, 0005737 cytoplasm.
Probab=97.00 E-value=0.0033 Score=40.40 Aligned_cols=103 Identities=22% Similarity=0.301 Sum_probs=63.8
Q ss_pred EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 19998498779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 4 NVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 4 ~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
T Consensus 132 ~glviGaGGtsrAA~yaL~sLG-~-~~I~~inR~~dKl~~L~~~~~~~~~i---~~~e~--l~---~-~~~~-i~v~~~~ 199 (291)
T TIGR01809 132 AGLVIGAGGTSRAAVYALASLG-V-KDIYVINRSKDKLKKLVDLLVSEFVI---IRLES--LD---K-ELEE-IEVKDVE 199 (291)
T ss_pred EEEEECCCCHHHHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHHCCCCEE---EEEEC--CC---C-CCCC-CEEEEEE
T ss_conf 0588838721489999998669-9-70699735866766887741356135---66510--13---3-4110-2024567
Q ss_pred EEEECCCCC--CCHHHHH---HHHHCCC------CEEEECCCCCCH
Q ss_conf 999737610--0327899---9986288------689603664200
Q gi|254780742|r 84 IIINVGSSF--LNMSVLR---ACIDSNV------AYIDTAIHESPL 118 (419)
Q Consensus 84 vVin~~~p~--~~~~v~~---a~i~~g~------hyvD~s~~~~~~ 118 (419)
T Consensus 200 v~vStvPaD~p~d~~~l~~~~~fl~~~~~~~f~~~lLdaaY~p~~T 245 (291)
T TIGR01809 200 VAVSTVPADKPLDDEVLEALKRFLLKKAKAAFVGILLDAAYDPSVT 245 (291)
T ss_pred EEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
T ss_conf 8886157886468889999989875133001101255431488986