HHsearch alignment for GI: 254780742 and conserved domain: TIGR03589
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.19 E-value=1.4e-05 Score=56.34 Aligned_cols=102 Identities=19% Similarity=0.227 Sum_probs=76.1
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 731999849-8779999999996089872599963999999999987343024555557308994378989999999753
Q gi|254780742|r 2 KKNVLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKT 80 (419)
Q Consensus 2 ~k~ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 80 (419)
T Consensus 4 ~K~ILVTGGaGfIGS~lv~~Ll~~~~~-~~iii~~~de~~~~~l~~~~~-------~~~i~f~~gDIrD~~~l~~~~~-- 73 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNP-KKIIIYSRDELKQWEMQQKFP-------APCLRFFIGDVRDKERLTRALR-- 73 (324)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCC-CEEEEECCCCCCHHHHHHHCC-------CCCEEEEECCCCCHHHHHHHHC--
T ss_conf 399999079779999999999972998-289996686403288985168-------9875999677778899997634--
Q ss_pred CCCEEEECCCCCC------C------------HHHHHHHHHCCCC-EEEECC
Q ss_conf 9729997376100------3------------2789999862886-896036
Q gi|254780742|r 81 NSQIIINVGSSFL------N------------MSVLRACIDSNVA-YIDTAI 113 (419)
Q Consensus 81 ~~dvVin~~~p~~------~------------~~v~~a~i~~g~h-yvD~s~ 113 (419)
T Consensus 74 ~vD~VfHaAA~khVp~se~nP~e~i~tNV~Gt~nlleaa~~~~Vkk~V~iST 125 (324)
T TIGR03589 74 GVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALST 125 (324)
T ss_pred CCCEEEECCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 8889999462776726776989999999799999999988555431786226