HHsearch alignment for GI: 254780742 and conserved domain: cd00300

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=97.17  E-value=0.0016  Score=42.59  Aligned_cols=78  Identities=15%  Similarity=0.181  Sum_probs=54.7

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCE
Q ss_conf             99984987799999999960898725999639999999999873430245555573089943789899999997539729
Q gi|254780742|r    5 VLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQI   84 (419)
Q Consensus         5 ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~dv   84 (419)
T Consensus         1 V~IIGaG~VG~~~A~~l~~~~-l~~el~L~Di~~~~a~g~a~Dl~~~~~~~~--~~~~--~~~~~~~~----~~--daDv   69 (300)
T cd00300           1 ITIIGAGNVGAAVAFALIAKG-LASELVLVDVNEEKAKGDALDLSHASAFLA--TGTI--VRGGDYAD----AA--DADI   69 (300)
T ss_pred             CEEECCCHHHHHHHHHHHHCC-CCCEEEEECCCCCCCHHHHHHHHHCCCCCC--CCEE--ECCCCHHH----HC--CCCE
T ss_conf             989896889999999998679-988799981899811568888772563468--8539--82798899----67--9999


Q ss_pred             EEECCCCCC
Q ss_conf             997376100
Q gi|254780742|r   85 IINVGSSFL   93 (419)
Q Consensus        85 Vin~~~p~~   93 (419)
T Consensus        70 vVitaG~~r   78 (300)
T cd00300          70 VVITAGAPR   78 (300)
T ss_pred             EEECCCCCC
T ss_conf             998789899