HHsearch alignment for GI: 254780742 and conserved domain: cd00300
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=97.17 E-value=0.0016 Score=42.59 Aligned_cols=78 Identities=15% Similarity=0.181 Sum_probs=54.7
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCE
Q ss_conf 99984987799999999960898725999639999999999873430245555573089943789899999997539729
Q gi|254780742|r 5 VLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQI 84 (419)
Q Consensus 5 ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~dv 84 (419)
T Consensus 1 V~IIGaG~VG~~~A~~l~~~~-l~~el~L~Di~~~~a~g~a~Dl~~~~~~~~--~~~~--~~~~~~~~----~~--daDv 69 (300)
T cd00300 1 ITIIGAGNVGAAVAFALIAKG-LASELVLVDVNEEKAKGDALDLSHASAFLA--TGTI--VRGGDYAD----AA--DADI 69 (300)
T ss_pred CEEECCCHHHHHHHHHHHHCC-CCCEEEEECCCCCCCHHHHHHHHHCCCCCC--CCEE--ECCCCHHH----HC--CCCE
T ss_conf 989896889999999998679-988799981899811568888772563468--8539--82798899----67--9999
Q ss_pred EEECCCCCC
Q ss_conf 997376100
Q gi|254780742|r 85 IINVGSSFL 93 (419)
Q Consensus 85 Vin~~~p~~ 93 (419)
T Consensus 70 vVitaG~~r 78 (300)
T cd00300 70 VVITAGAPR 78 (300)
T ss_pred EEECCCCCC
T ss_conf 998789899