HHsearch alignment for GI: 254780742 and conserved domain: cd01339
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=96.87 E-value=0.0045 Score=39.52 Aligned_cols=77 Identities=16% Similarity=0.141 Sum_probs=52.3
Q ss_pred EEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCE
Q ss_conf 99984987799999999960898725999639999999999873430245555573089943789899999997539729
Q gi|254780742|r 5 VLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQI 84 (419)
Q Consensus 5 ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~dv 84 (419)
T Consensus 1 V~IIGaG~VG~~~a~~l~~~-~~~-el~L~D~~~~~a~g~a~DL~~~~~~~~-~~~~v~--~~~d~~~----~~--daDv 69 (300)
T cd01339 1 ISIIGAGNVGATLAQLLALK-ELG-DVVLLDIVEGLPQGKALDISQAAPILG-SDTKVT--GTNDYED----IA--GSDV 69 (300)
T ss_pred CEEECCCHHHHHHHHHHHHC-CCC-EEEEECCCCCHHHHHHHHHHHHHHCCC-CCCEEE--ECCCHHH----HC--CCCE
T ss_conf 98989688899999999857-996-799980999800579887761320158-985899--4788799----47--9989
Q ss_pred EEECCCCC
Q ss_conf 99737610
Q gi|254780742|r 85 IINVGSSF 92 (419)
Q Consensus 85 Vin~~~p~ 92 (419)
T Consensus 70 vVitaG~~ 77 (300)
T cd01339 70 VVITAGIP 77 (300)
T ss_pred EEEECCCC
T ss_conf 99906778