HHsearch alignment for GI: 254780742 and conserved domain: cd01339

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=96.87  E-value=0.0045  Score=39.52  Aligned_cols=77  Identities=16%  Similarity=0.141  Sum_probs=52.3

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCE
Q ss_conf             99984987799999999960898725999639999999999873430245555573089943789899999997539729
Q gi|254780742|r    5 VLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQI   84 (419)
Q Consensus         5 ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~dv   84 (419)
T Consensus         1 V~IIGaG~VG~~~a~~l~~~-~~~-el~L~D~~~~~a~g~a~DL~~~~~~~~-~~~~v~--~~~d~~~----~~--daDv   69 (300)
T cd01339           1 ISIIGAGNVGATLAQLLALK-ELG-DVVLLDIVEGLPQGKALDISQAAPILG-SDTKVT--GTNDYED----IA--GSDV   69 (300)
T ss_pred             CEEECCCHHHHHHHHHHHHC-CCC-EEEEECCCCCHHHHHHHHHHHHHHCCC-CCCEEE--ECCCHHH----HC--CCCE
T ss_conf             98989688899999999857-996-799980999800579887761320158-985899--4788799----47--9989


Q ss_pred             EEECCCCC
Q ss_conf             99737610
Q gi|254780742|r   85 IINVGSSF   92 (419)
Q Consensus        85 Vin~~~p~   92 (419)
T Consensus        70 vVitaG~~   77 (300)
T cd01339          70 VVITAGIP   77 (300)
T ss_pred             EEEECCCC
T ss_conf             99906778