HHsearch alignment for GI: 254780742 and conserved domain: cd05313
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=96.55 E-value=0.066 Score=31.63 Aligned_cols=131 Identities=13% Similarity=0.136 Sum_probs=75.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEE----------CCHHHHHHHHHHHHHHCCC--CCCCCCEEEEECCCC
Q ss_conf 7319998498779999999996089872599963----------9999999999873430245--555573089943789
Q gi|254780742|r 2 KKNVLIIGAGGVAHVVAHKCAQNNDILGDINIAS----------RTLQKCSKIIDSIYKKKSL--KIDGKLAIHQVDALN 69 (419)
Q Consensus 2 ~k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~----------r~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~D~~d 69 (419)
T Consensus 38 g~~vaIQGfGnVG~~aA~~l~e~Ga--kvVaVsD~~G~i~~~~Gld~~~l~~l~~~k~~~~~~~~~~~~~~~~~--~~~~ 113 (254)
T cd05313 38 GKRVAISGSGNVAQYAAEKLLELGA--KVVTLSDSKGYVYDPDGFTGEKLAELKEIKEVRRGRVSEYAKKYGTA--KYFE 113 (254)
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCC--EECC
T ss_conf 9999998977999999999997799--79999857850887999988999999999974687102444138985--6638
Q ss_pred HHHHHHHHHHCCCCEEEECCCCC-CCHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 89999999753972999737610-03278999986288689603664200001442000035775108888518869953
Q gi|254780742|r 70 IKAVVELIKKTNSQIIINVGSSF-LNMSVLRACIDSNVAYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAILG 148 (419)
Q Consensus 70 ~~~l~~~~~~~~~dvVin~~~p~-~~~~v~~a~i~~g~hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~~ 148 (419)
T Consensus 114 ~~~~---~~-~~cDIliPaA~en~I~~~nA~~i~a~~ck~IvEgANgP~T~-------------eAd~iL~~kGI~viPD 176 (254)
T cd05313 114 GKKP---WE-VPCDIAFPCATQNEVDAEDAKLLVKNGCKYVAEGANMPCTA-------------EAIEVFRQAGVLFAPG 176 (254)
T ss_pred CCCH---HH-CCCCEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCH-------------HHHHHHHHCCCEEECH
T ss_conf 9751---33-04769974354667899999999967982998658899987-------------8999999889889680
Q ss_pred CCHHH
Q ss_conf 75011
Q gi|254780742|r 149 AGFDP 153 (419)
Q Consensus 149 ~G~~P 153 (419)
T Consensus 177 ilaNA 181 (254)
T cd05313 177 KAANA 181 (254)
T ss_pred HHHCC
T ss_conf 56207