HHsearch alignment for GI: 254780742 and conserved domain: pfam02254

>pfam02254 TrkA_N TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.
Probab=97.77  E-value=0.001  Score=43.90  Aligned_cols=110  Identities=12%  Similarity=0.177  Sum_probs=74.1

Q ss_pred             EEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCE
Q ss_conf             99984987799999999960898725999639999999999873430245555573089943789899999997539729
Q gi|254780742|r    5 VLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQI   84 (419)
Q Consensus         5 ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~dv   84 (419)
T Consensus         1 viI~G~g~~G~~la~~L~~~~----~v~vId~d~~~~~~~~~~-----------~~~vi~GD~~~~~~L~~a~i~-~a~~   64 (115)
T pfam02254         1 IIIIGYGRVGRSLAEELREGG----PVVVIDKDPERVEELREE-----------GVPVVVGDATDEEVLEEAGIE-DADA   64 (115)
T ss_pred             CEEECCCHHHHHHHHHHHHCC----CEEEEECCHHHHHHHHHC-----------CCEEEEEECCCHHHHHHHCCC-CCCE
T ss_conf             999878889999999998089----999999987998778866-----------986999956886678761920-2879


Q ss_pred             EEECCCCCC-CHHHHHHHHHC-CC-CEEEECCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf             997376100-32789999862-88-68960366420000144200003577510888851886995
Q gi|254780742|r   85 IINVGSSFL-NMSVLRACIDS-NV-AYIDTAIHESPLKICESPPWYNNYEWSLLDECRTKSITAIL  147 (419)
Q Consensus        85 Vin~~~p~~-~~~v~~a~i~~-g~-hyvD~s~~~~~~~~~~~~~~~~~~~~~l~~~a~~ag~~~i~  147 (419)
T Consensus        65 vi~~~~~d~~n~~~~~~~r~~~~~~~iiar~~~~-----------------~~~~~l~~~Gad~vi  113 (115)
T pfam02254        65 VVAATGDDEANILIVLLARELNPAKKIIARANDP-----------------EHAELLRRLGADEVI  113 (115)
T ss_pred             EEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCH-----------------HHHHHHHHCCCCEEE
T ss_conf             9996298499999999999978998099998789-----------------999999976989997