HHsearch alignment for GI: 254780742 and conserved domain: pfam02423
>pfam02423 OCD_Mu_crystall Ornithine cyclodeaminase/mu-crystallin family. This family contains the bacterial Ornithine cyclodeaminase enzyme EC:4.3.1.12, which catalyses the deamination of ornithine to proline. This family also contains mu-Crystallin the major component of the eye lens in several Australian marsupials, mRNA for this protein has also been found in human retina.
Probab=97.95 E-value=0.00019 Score=48.82 Aligned_cols=103 Identities=17% Similarity=0.199 Sum_probs=76.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 31999849877999999999608987259996399999999998734302455555730899437898999999975397
Q gi|254780742|r 3 KNVLIIGAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNS 82 (419)
Q Consensus 3 k~ilv~GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~ 82 (419)
T Consensus 130 ~~l~iiGaG~QA~~~l~al~~v~~-i~~v~v~~r~~~~~~~f~~~~~~~-------~~~v~~~--~~~---~~av~--~A 194 (312)
T pfam02423 130 STLAIIGAGAQAEFQAEALSAVLP-IEEIRIYDRDPEAAEKFARNLQGK-------GFEIVAC--TSA---EEAVE--GA 194 (312)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHC-------CCCEEEE--CCH---HHHHH--CC
T ss_conf 579996462538999999996199-768999968989999999999834-------9965994--899---99971--49
Q ss_pred CEEEECCCCCCCHHHH-HHHHHCCCCEEEECCCCCCHHCC
Q ss_conf 2999737610032789-99986288689603664200001
Q gi|254780742|r 83 QIIINVGSSFLNMSVL-RACIDSNVAYIDTAIHESPLKIC 121 (419)
Q Consensus 83 dvVin~~~p~~~~~v~-~a~i~~g~hyvD~s~~~~~~~~~ 121 (419)
T Consensus 195 DIIvtaT~s~~-~P~~~~~~l~~G~hv~~vGs~~p~~~El 233 (312)
T pfam02423 195 DIVVTVTPDKE-FPILKAEWVKPGVHINAVGADCPGKTEL 233 (312)
T ss_pred CEEEEEECCCC-CCCCCHHHCCCCCEEEEECCCCCCCCCC
T ss_conf 98999735997-7500778838986899726999970436