HHsearch alignment for GI: 254780742 and conserved domain: pfam02670
>pfam02670 DXP_reductoisom 1-deoxy-D-xylulose 5-phosphate reductoisomerase. This is a family of 1-deoxy-D-xylulose 5-phosphate reductoisomerases. This enzyme catalyses the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate in the presence of NADPH. This reaction is part of the terpenoid biosynthesis pathway.
Probab=96.98 E-value=0.012 Score=36.56 Aligned_cols=101 Identities=17% Similarity=0.149 Sum_probs=71.5
Q ss_pred EEEECC-CHHHHHHHHHHHHCCCCC-CEEEEEECCHHHHHHHHHHHHHHCCCCCC---------------CCCEEEEECC
Q ss_conf 999849-877999999999608987-25999639999999999873430245555---------------5730899437
Q gi|254780742|r 5 VLIIGA-GGVAHVVAHKCAQNNDIL-GDINIASRTLQKCSKIIDSIYKKKSLKID---------------GKLAIHQVDA 67 (419)
Q Consensus 5 ilv~Ga-G~vG~~~~~~L~~~~~~~-~~i~va~r~~~~~~~~~~~l~~~~~~~~~---------------~~~~~~~~D~ 67 (419)
T Consensus 1 I~IlGsTGSIG~~tL~Vi~~~~~~f~v~~Lsa~~N~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~i----~ 76 (129)
T pfam02670 1 ITILGSTGSIGTQTLDVIRRNPDRFEVVALSAGRNVELLAEQIKEFKPKYVAVADEEAAEELKEALAGAGLKTEV----L 76 (129)
T ss_pred CEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCCCEE----E
T ss_conf 989767868899999999959567189999834789999999997399799995899999999863247887379----8
Q ss_pred CCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEE
Q ss_conf 898999999975397299973761003278999986288689
Q gi|254780742|r 68 LNIKAVVELIKKTNSQIIINVGSSFLNMSVLRACIDSNVAYI 109 (419)
Q Consensus 68 ~d~~~l~~~~~~~~~dvVin~~~p~~~~~v~~a~i~~g~hyv 109 (419)
T Consensus 77 ~g~~~l~~~~~~~~~D~vi~AIsG~aGL~pt~~ai~~gk~ia 118 (129)
T pfam02670 77 AGEEGLCELAALPEADIVVNAIVGAAGLLPTLAAIKAGKTIA 118 (129)
T ss_pred ECHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEE
T ss_conf 788999999707788999981565013999999998699899