HHsearch alignment for GI: 254780742 and conserved domain: pfam05368
>pfam05368 NmrA NmrA-like family. NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.
Probab=98.58 E-value=8e-07 Score=64.82 Aligned_cols=92 Identities=16% Similarity=0.208 Sum_probs=69.0
Q ss_pred EEEECC-CHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 999849-8779999999996089872599963999999999987343024555557308994378989999999753972
Q gi|254780742|r 5 VLIIGA-GGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALNIKAVVELIKKTNSQ 83 (419)
Q Consensus 5 ilv~Ga-G~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~~~d 83 (419)
T Consensus 1 IlV~GatG~iG~~vv~~L~~~g-~--~Vr~l~R~~~~~~--~~~l~-------~~gve~v~gD~~d~~sl~~al~--gvd 66 (232)
T pfam05368 1 ILVFGATGYQGGSVVRASLKAG-H--PVRALVRDPKSEL--AKSLK-------AAGVELVEGDLDDHESLVEALK--GVD 66 (232)
T ss_pred EEEECCCHHHHHHHHHHHHHCC-C--CEEEEECCCCHHH--HHHHH-------HCCCEEEEECCCCHHHHHHHHC--CCC
T ss_conf 0998968289999999998589-9--3899971873665--66664-------1798899906888789999967--998
Q ss_pred EEEECCCCCCC------HHHHHHHHHCCCCEEE
Q ss_conf 99973761003------2789999862886896
Q gi|254780742|r 84 IIINVGSSFLN------MSVLRACIDSNVAYID 110 (419)
Q Consensus 84 vVin~~~p~~~------~~v~~a~i~~g~hyvD 110 (419)
T Consensus 67 ~v~~~~~~~~~~~~~~~~~~~~AA~~aGVk~~V 99 (232)
T pfam05368 67 VVFSVTGFWLSKEIEDGKKLADAAKEAGVKHFI 99 (232)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 899915887417799999999999973998345