HHsearch alignment for GI: 254780742 and conserved domain: smart00829

Probab=97.02  E-value=0.011  Score=36.90  Aligned_cols=97  Identities=14%  Similarity=0.214  Sum_probs=52.0

Q ss_pred             CEEEEE-CCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC---HHHHHHHHH
Q ss_conf             319998-4987799999999960898725999639999999999873430245555573089943789---899999997
Q gi|254780742|r    3 KNVLII-GAGGVAHVVAHKCAQNNDILGDINIASRTLQKCSKIIDSIYKKKSLKIDGKLAIHQVDALN---IKAVVELIK   78 (419)
Q Consensus         3 k~ilv~-GaG~vG~~~~~~L~~~~~~~~~i~va~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~d---~~~l~~~~~   78 (419)
T Consensus       106 ~~VlI~gg~G~vG~~aiq-lak~~Ga--~Vi~t~~s~~k~~~-~~~lG~~---------~~~v~~~~~~~~~~~v~~~t~  172 (288)
T smart00829      106 ESVLIHAAAGGVGQAAIQ-LAQHLGA--EVFATAGSPEKRDF-LRELGIP---------DDHIFSSRDLSFADEILRATG  172 (288)
T ss_pred             CEEEEECCCCHHHHHHHH-HHHHCCC--CEEEEECCHHHHHH-HHHCCCC---------CCEEEECCCCCHHHHHHHHHC
T ss_conf             999997898677799999-9997398--30034088899999-9976999---------607621799509999998708


Q ss_pred             HCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECC
Q ss_conf             53972999737610032789999862886896036
Q gi|254780742|r   79 KTNSQIIINVGSSFLNMSVLRACIDSNVAYIDTAI  113 (419)
Q Consensus        79 ~~~~dvVin~~~p~~~~~v~~a~i~~g~hyvD~s~  113 (419)
T Consensus       173 g~gvDvv~d~vgg~~~~~~~-~~l~~~G~~v~ig~  206 (288)
T smart00829      173 GRGVDVVLNSLAGEFLDASL-RCLAPGGRFVEIGK  206 (288)
T ss_pred             CCCCEEEEECCCHHHHHHHH-HHHCCCCEEEEECC
T ss_conf             98827999898689999999-97536988999756