HHsearch alignment of GI: 254780743 and MMDB domain: 1oe4_A_
>1oe4_A (A:) SMUG1, single-strand selective monofunctional uracil DNA glycosylase; hydrolase, hydrolase/complex, SMUG1; HET: 3DR; 2.0A {Xenopus laevis}
Probab=100.00 E-value=1.4e-45 Score=280.10 Aligned_cols=166 Identities=11% Similarity=0.035 Sum_probs=146.5
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCCCCCC-CCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC----CC
Q ss_conf 9899999996003885200287722367-888884899857898300112001207004899999986098622----21
Q gi|254780743|r 76 SLHELKSLLRSFHDCHLCSTSLSTICAT-QTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSIEIMRT----QI 150 (261)
Q Consensus 76 ~l~~L~~~~~~~~~C~L~~~~~~~v~g~-G~~~a~imiVgeaPg~~Ed~~G~pF~G~aG~lL~~mL~aigl~r~----~v 150 (261)
.+.+|...+..|..|.++.++.+.+.+. |..++++|+|||+||.+||.+|.||+|+||++|++||+++|++++ +|
T Consensus 57 ~l~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~igeaP~~~ed~~g~pf~g~sG~~L~~~l~~~gl~~~~f~~~~ 136 (247)
T 1oe4_A 57 LFLGMNPGPFGMAQTGVPFGEVNHVRDWLQIEGPVSKPEVEHPKRRIRGFECPQSEVSGARFWSLFKSLCGQPETFFKHC 136 (247)
T ss_dssp EEEESSCCTTTHHHHSSTTCCHHHHHHTTCCCCCCCCCSSCCTTSCCCGGGCCSCCHHHHHHHHHHHHHHSSHHHHHTTE
T ss_pred EEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 99842898777864087858879998785367746789644777765354664256529889999998739988986634
Q ss_pred CEEEEEECCC-----------CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCCCHHCCCEEEEE
Q ss_conf 0000000122-----------56666778899999999999863229767995255999998446533101106505766
Q gi|254780743|r 151 HISMISPWHP-----------PGNRNLSNIEMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNL 219 (261)
Q Consensus 151 yitn~vkcrP-----------p~nr~p~~~ei~~c~p~L~~ei~li~Pk~ii~lG~~a~~~ll~~~~~~i~~~rG~~~~~ 219 (261)
||||+|||+| +.||+|+..|+..|++||.+||++++|++||+||++|.+++++ +.+.||+|
T Consensus 137 yitn~v~c~p~~~~~k~~~~~~~nr~p~~~e~~~C~~~L~~eI~l~~P~iIv~lG~~a~~~ll~-----~~~~~g~~--- 208 (247)
T 1oe4_A 137 FVHNHCPLIFMNHSGKNLTPTDLPKAQRDTLLEICDEALCQAVRVLGVKLVIGVGRFSEQRARK-----ALMAEGID--- 208 (247)
T ss_dssp EEEESCCCEEECTTCCEECGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEESHHHHHHHHH-----HHHHTTCS---
T ss_pred EEEECCCCEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHH-----HHCCCCCC---
T ss_conf 0451377223288998688133789999999999999999999862972899977899999999-----85146998---
Q ss_pred ECCCCCEEEEEEECHHHH--HCCHHHHHHHHHHHHHHH
Q ss_conf 428973789997080388--336598999999999999
Q gi|254780743|r 220 CTPHSIIPTLATVHPQEL--IQYPLIKKNTWHALITLK 255 (261)
Q Consensus 220 ~~~~~~i~~~pt~HPs~L--Lr~P~~K~~aW~DL~~l~ 255 (261)
+++++||||||+ +++|+.|+.+|+||+.++
T Consensus 209 ------i~v~~~~HPS~~~~~~~~~~~~~~~~~l~~lk 240 (247)
T 1oe4_A 209 ------VTVKGIMHPSPRNPQANKGWEGIVRGQLLELG 240 (247)
T ss_dssp ------CEEEEECCCCTTCGGGTTTHHHHHHHHHHHHT
T ss_pred ------CEEEECCCCCCCCHHHCCCCHHHHHHHHHHCC
T ss_conf ------36865589999880010583899999999877