HHsearch results for GI: 254780743 and protein with PDBid: 2l3f_A
>2l3f_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=96.15 E-value=0.00094 Score=40.19 Aligned_cols=133 Identities=13% Similarity=0.156 Sum_probs=77.3
Q ss_pred CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHC-CCCC--------------CCCCEEEEEE-CCCCCCC
Q ss_conf 3678888848998578983001120012070048999999860-9862--------------2210000000-1225666
Q gi|254780743|r 101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI-EIMR--------------TQIHISMISP-WHPPGNR 164 (261)
Q Consensus 101 ~g~G~~~a~imiVgeaPg~~Ed~~G~pF~G~aG~lL~~mL~ai-gl~r--------------~~vyitn~vk-crPp~nr 164 (261)
...-+++++|+|+|-.||....+.|..|.++..++ -++|..+ +.+. ..+-+|++|+ |.-.+..
T Consensus 7 pp~~~~~~~VLilGs~Pg~~S~~~g~yYa~p~N~F-W~il~~~~~~~~~~~~~~~~~~~L~~~gIgl~Dvv~~~~r~gs~ 85 (166)
T 2l3f_A 7 PAVLDENTEILILGSLPSDESIRKQQYYGNPGNDF-WRLVGHAIGENLQDMAYEKKLKTLKHNRIGLWDVFKAGSREGSQ 85 (166)
T ss_dssp CCBCCSSCSEEEEESSCCHHHHHHTSGGGSTTCTH-HHHHHHHHTSCSTTSCHHHHHHHHHHTTEEEEESEEEECCCSSS
T ss_pred CCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCH-HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHCCCCCC
T ss_conf 99669998689985288977886688757998841-77899873898755571889999998595301001242106767
Q ss_pred CCCHHHHHHHHHHHHHHH-HHC-CCCEEEEECHHHHHHHHCCCCCCCHHCCCEEEEEECCCCCEEEEEEECHHHHHCCHH
Q ss_conf 677889999999999986-322-976799525599999844653310110650576642897378999708038833659
Q gi|254780743|r 165 NLSNIEMEICRPIIMRQI-ELI-SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL 242 (261)
Q Consensus 165 ~p~~~ei~~c~p~L~~ei-~li-~Pk~ii~lG~~a~~~ll~~~~~~i~~~rG~~~~~~~~~~~i~~~pt~HPs~LLr~P~ 242 (261)
..+|..-.+-....| +.. +.+.|++.|..|.+.+.... . .| -.+-++|+-.|+.-....
T Consensus 86 ---d~~i~~~~~nd~~~l~~~~p~i~~i~fnG~~A~~~~~~~~--~----~~---------~~~~vLPSTSpana~~~~- 146 (166)
T 2l3f_A 86 ---DSKIGDEEINDFSGLKEMVPKLRLICFNGRKAGEYEPLLR--G----MG---------YETKVLPSSSGANRRFSK- 146 (166)
T ss_dssp ---SCCCCCCEECCCTTHHHHCSSCCEEEEESHHHHTTHHHHG--G----GT---------CEEEEECCCSHHHHTTCS-
T ss_pred ---HHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCC--C----CC---------CEEEECCCCCHHHHCCCH-
T ss_conf ---7787776666899999858881199978999985650125--7----89---------738985898766566298-
Q ss_pred HHHHHHHHHHH
Q ss_conf 89999999999
Q gi|254780743|r 243 IKKNTWHALIT 253 (261)
Q Consensus 243 ~K~~aW~DL~~ 253 (261)
.|...|.++..
T Consensus 147 ekl~~W~~l~~ 157 (166)
T 2l3f_A 147 NRESEWEAVFR 157 (166)
T ss_dssp STHHHHHHHHG
T ss_pred HHHHHHHHHHH
T ss_conf 99999999999