HHsearch results for GI: 254780743 and protein with PDBid: 2l3f_A

>2l3f_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=96.15  E-value=0.00094  Score=40.19  Aligned_cols=133  Identities=13%  Similarity=0.156  Sum_probs=77.3

Q ss_pred             CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHC-CCCC--------------CCCCEEEEEE-CCCCCCC
Q ss_conf             3678888848998578983001120012070048999999860-9862--------------2210000000-1225666
Q gi|254780743|r  101 CATQTEGQDLMIIGYTPSDSDNISGKPFSGKTGNMLDKMLQSI-EIMR--------------TQIHISMISP-WHPPGNR  164 (261)
Q Consensus       101 ~g~G~~~a~imiVgeaPg~~Ed~~G~pF~G~aG~lL~~mL~ai-gl~r--------------~~vyitn~vk-crPp~nr  164 (261)
                      ...-+++++|+|+|-.||....+.|..|.++..++ -++|..+ +.+.              ..+-+|++|+ |.-.+..
T Consensus         7 pp~~~~~~~VLilGs~Pg~~S~~~g~yYa~p~N~F-W~il~~~~~~~~~~~~~~~~~~~L~~~gIgl~Dvv~~~~r~gs~   85 (166)
T 2l3f_A            7 PAVLDENTEILILGSLPSDESIRKQQYYGNPGNDF-WRLVGHAIGENLQDMAYEKKLKTLKHNRIGLWDVFKAGSREGSQ   85 (166)
T ss_dssp             CCBCCSSCSEEEEESSCCHHHHHHTSGGGSTTCTH-HHHHHHHHTSCSTTSCHHHHHHHHHHTTEEEEESEEEECCCSSS
T ss_pred             CCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCH-HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHCCCCCC
T ss_conf             99669998689985288977886688757998841-77899873898755571889999998595301001242106767


Q ss_pred             CCCHHHHHHHHHHHHHHH-HHC-CCCEEEEECHHHHHHHHCCCCCCCHHCCCEEEEEECCCCCEEEEEEECHHHHHCCHH
Q ss_conf             677889999999999986-322-976799525599999844653310110650576642897378999708038833659
Q gi|254780743|r  165 NLSNIEMEICRPIIMRQI-ELI-SPKILLFIGNKTKNFFFNNDAQKTYQNLGKWSNLCTPHSIIPTLATVHPQELIQYPL  242 (261)
Q Consensus       165 ~p~~~ei~~c~p~L~~ei-~li-~Pk~ii~lG~~a~~~ll~~~~~~i~~~rG~~~~~~~~~~~i~~~pt~HPs~LLr~P~  242 (261)
                         ..+|..-.+-....| +.. +.+.|++.|..|.+.+....  .    .|         -.+-++|+-.|+.-.... 
T Consensus        86 ---d~~i~~~~~nd~~~l~~~~p~i~~i~fnG~~A~~~~~~~~--~----~~---------~~~~vLPSTSpana~~~~-  146 (166)
T 2l3f_A           86 ---DSKIGDEEINDFSGLKEMVPKLRLICFNGRKAGEYEPLLR--G----MG---------YETKVLPSSSGANRRFSK-  146 (166)
T ss_dssp             ---SCCCCCCEECCCTTHHHHCSSCCEEEEESHHHHTTHHHHG--G----GT---------CEEEEECCCSHHHHTTCS-
T ss_pred             ---HHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCC--C----CC---------CEEEECCCCCHHHHCCCH-
T ss_conf             ---7787776666899999858881199978999985650125--7----89---------738985898766566298-


Q ss_pred             HHHHHHHHHHH
Q ss_conf             89999999999
Q gi|254780743|r  243 IKKNTWHALIT  253 (261)
Q Consensus       243 ~K~~aW~DL~~  253 (261)
                      .|...|.++..
T Consensus       147 ekl~~W~~l~~  157 (166)
T 2l3f_A          147 NRESEWEAVFR  157 (166)
T ss_dssp             STHHHHHHHHG
T ss_pred             HHHHHHHHHHH
T ss_conf             99999999999