HHSEARCH alignment of GI: 254780743 and SCOP domain: d1oe4a_

Alignment
>d1oe4a_ c.18.1.3 (A:) Single-strand selective monofunctional uracil-DNA glycosylase SMUG1 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=98.93  E-value=3e-09  Score=70.17  Aligned_cols=131  Identities=15%  Similarity=0.287  Sum_probs=91.3

Q ss_pred             CCCCCCCEEEEECCCCCCC-CCCCCCCCC-----------------------------------CCHHHHHHHHHHC-CC
Q ss_conf             7888884899857898300-112001207-----------------------------------0048999999860-98
Q gi|254780743|r  103 TQTEGQDLMIIGYTPSDSD-NISGKPFSG-----------------------------------KTGNMLDKMLQSI-EI  145 (261)
Q Consensus       103 ~G~~~a~imiVgeaPg~~E-d~~G~pF~G-----------------------------------~aG~lL~~mL~ai-gl  145 (261)
                      .++...+++|+|..||... -.+|.||..                                   .||+.|-.+++.. |-
T Consensus        48 y~~~~~~~l~lGmNPGp~Gm~qTGVPFgd~~~vr~~l~I~~~v~~P~~~HPKRpi~Gl~~~r~EvSg~rlW~l~~~~~g~  127 (245)
T d1oe4a_          48 YCKSKKEVLFLGMNPGPFGMAQTGVPFGEVNHVRDWLQIEGPVSKPEVEHPKRRIRGFECPQSEVSGARFWSLFKSLCGQ  127 (245)
T ss_dssp             HCSSCCSEEEEESSCCTTTHHHHSSTTCCHHHHHHTTCCCCCCCCCSSCCTTSCCCGGGCCSCCHHHHHHHHHHHHHHSS
T ss_pred             HCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf             73899978998328987767652868687799887754777557885337777655656665401798999999998299


Q ss_pred             CC---CCCCEEEEEECCC----CCCCCCCHH-------HHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCCCCHH
Q ss_conf             62---2210000000122----566667788-------999999999998632297679952559999984465331011
Q gi|254780743|r  146 MR---TQIHISMISPWHP----PGNRNLSNI-------EMEICRPIIMRQIELISPKILLFIGNKTKNFFFNNDAQKTYQ  211 (261)
Q Consensus       146 ~r---~~vyitn~vkcrP----p~nr~p~~~-------ei~~c~p~L~~ei~li~Pk~ii~lG~~a~~~ll~~~~~~i~~  211 (261)
                      ..   +++|+.|.++--+    -.|++|+.-       -...|-.+|.+.|++.+|++||.+|+.|.+.+-.    .+. 
T Consensus       128 pe~ff~~~fv~N~CPL~f~~e~GkN~TP~~l~~~~~~~l~~~Cd~~L~~~v~~L~p~~VIgVG~~Ae~ra~~----al~-  202 (245)
T d1oe4a_         128 PETFFKHCFVHNHCPLIFMNHSGKNLTPTDLPKAQRDTLLEICDEALCQAVRVLGVKLVIGVGRFSEQRARK----ALM-  202 (245)
T ss_dssp             HHHHHTTEEEEESCCCEEECTTCCEECGGGSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEESHHHHHHHHH----HHH-
T ss_pred             HHHHHHHHHEEECCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHH----HHH-
T ss_conf             899876550364178664588899898211578899999999999999999754960999837899999999----862-


Q ss_pred             CCCEEEEEECCCCCEEEEEEECHHHHHCCHHHHHHHHHH
Q ss_conf             065057664289737899970803883365989999999
Q gi|254780743|r  212 NLGKWSNLCTPHSIIPTLATVHPQELIQYPLIKKNTWHA  250 (261)
Q Consensus       212 ~rG~~~~~~~~~~~i~~~pt~HPs~LLr~P~~K~~aW~D  250 (261)
                      ..         +..+++....|||-  ++|...|. |..
T Consensus       203 ~~---------g~~v~v~~i~HPSP--asp~aN~~-W~e  229 (245)
T d1oe4a_         203 AE---------GIDVTVKGIMHPSP--RNPQANKG-WEG  229 (245)
T ss_dssp             HT---------TCSCEEEEECCCCT--TCGGGTTT-HHH
T ss_pred             CC---------CCCCEEEECCCCCC--CCHHCCCC-CHH
T ss_conf             36---------99845864789999--88000058-489


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Uracil-DNA glycosylase-like
superfamily: Uracil-DNA glycosylase-like
family: Single-strand selective monofunctional uracil-DNA glycosylase SMUG1
domain: Single-strand selective monofunctional uracil-DNA glycosylase SMUG1
species: African clawed frog (Xenopus laevis) [TaxId: 8355]