RPSBLAST alignment for GI: 254780744 and conserved domain: TIGR01842

>gnl|CDD|162555 TIGR01842, type_I_sec_PrtD, type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 544

 Score =  108 bits (271), Expect = 2e-24
 Identities = 64/220 (29%), Positives = 114/220 (51%), Gaps = 22/220 (10%)

Query: 39  YVVKGVDLYVKPGEIVGLLGPNGAGKTTFFYMMTGLICADSGSIKIDGNDITKMPMYRRA 98
             ++G+   ++ GE + ++GP+G+GK+T   ++ G+    SGS+++DG D+ +   + R 
Sbjct: 332 PTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQ---WDRE 388

Query: 99  RLG--ISYLPQEASIFRGLTVEENILAVLEVYEKDK-------KKRHEKLDSLLKEFNIT 149
             G  I YLPQ+  +F G TV ENI    E  + +K          HE +  L   ++  
Sbjct: 389 TFGKHIGYLPQDVELFPG-TVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDT- 446

Query: 150 KWRHVLAP---LLSGGQRRRLEIARSLVSFPSYILLDEPFAGVDPVAISDIHVLIRDLAS 206
               V+ P    LSGGQR+R+ +AR+L   P  ++LDEP + +D      +   I+ L +
Sbjct: 447 ----VIGPGGATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKA 502

Query: 207 RGIGILITDHNVHEILTLIDRAYIIHAGGVLAHGTVQEII 246
           RGI +++  H    +L  +D+  ++  G +   G   E++
Sbjct: 503 RGITVVVITHRP-SLLGCVDKILVLQDGRIARFGERDEVL 541