RPSBLAST alignment for GI: 254780744 and conserved domain: TIGR01846

>gnl|CDD|162558 TIGR01846, type_I_sec_HlyB, type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 694

 Score = 69.0 bits (169), Expect = 1e-12
 Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 25/212 (11%)

Query: 40  VVKGVDLYVKPGEIVGLLGPNGAGKTTFFYMMTGLICADSGSIKIDGNDITKM-PMYRRA 98
           V+  ++L +KPGE +G++GP+G+GK+T   ++  L     G + +DG D+    P + R 
Sbjct: 472 VLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRR 531

Query: 99  RLGISYLPQEASIFRGLTVEENI------LAVLEVYEKDK-KKRHEKLDSLLKEFNITKW 151
           ++G+  + QE  +F   ++ +NI           V    K    H+ +  L + +N    
Sbjct: 532 QMGV--VLQENVLFSR-SIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVG 588

Query: 152 RHVLAPLLSGGQRRRLEIARSLVSFPSYILLDEPFAGVDPVAISDIHVLIRDL--ASRGI 209
                  LSGGQR+R+ IAR+LV  P  ++ DE  + +D    S+  +++R++    RG 
Sbjct: 589 EK--GANLSGGQRQRIAIARALVGNPRILIFDEATSALD--YESE-ALIMRNMREICRGR 643

Query: 210 GILITDH------NVHEILTLIDRAYIIHAGG 235
            ++I  H          I+ L ++  I  +G 
Sbjct: 644 TVIIIAHRLSTVRACDRIIVL-EKGQIAESGR 674