>gnl|CDD|72988 cd03229, ABC_Class3, This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 178

Score = 137 bits (347), Expect = 2e-33 Identities = 68/206 (33%), Positives = 104/206 (50%), Gaps = 36/206 (17%) Query: 31 LTKKYNSVYVVKGVDLYVKPGEIVGLLGPNGAGKTTFFYMMTGLICADSGSIKIDGNDIT 90 ++K+Y V+ V L ++ GEIV LLGP+G+GK+T + GL DSGSI IDG D+T Sbjct: 6 VSKRYGQKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLT 65 Query: 91 KMPMYRRA-RLGISYLPQEASIFRGLTVEENILAVLEVYEKDKKKRHEKLDSLLKEFNIT 149 + R I + Q+ ++F LTV ENI Sbjct: 66 DLEDELPPLRRRIGMVFQDFALFPHLTVLENI---------------------------- 97 Query: 150 KWRHVLAPLLSGGQRRRLEIARSLVSFPSYILLDEPFAGVDPVAISDIHVLIRDL-ASRG 208 A LSGGQ++R+ +AR+L P +LLDEP + +DP+ ++ L++ L A G Sbjct: 98 ------ALGLSGGQQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLG 151 Query: 209 IGILITDHNVHEILTLIDRAYIIHAG 234 I +++ H++ E L DR ++ G Sbjct: 152 ITVVLVTHDLDEAARLADRVVVLRDG 177

RPSBLAST alignment for GI: 254780744 and conserved domain: cd03229