RPSBLAST alignment for GI: 254780744 and conserved domain: cd03237

>gnl|CDD|72996 cd03237, ABC_RNaseL_inhibitor_domain2, The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.. Length = 246

 Score = 68.8 bits (168), Expect = 1e-12
 Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 34/189 (17%)

Query: 48  VKPGEIVGLLGPNGAGKTTFFYMMTGLICADSGSIKIDGNDITKMPMYRRARLGISYLPQ 107
           +   E++G+LGPNG GKTTF  M+ G++  D G I+I+ +              +SY PQ
Sbjct: 22  ISESEVIGILGPNGIGKTTFIKMLAGVLKPDEGDIEIELDT-------------VSYKPQ 68

Query: 108 EASIFRGLTVEENILAVLEVYEKDKKKRHEKLDSLLKEFNITKWRHVLAPLLSGGQRRRL 167
                   TV + + ++ + +      + E    + K   I +      P LSGG+ +R+
Sbjct: 69  YIKADYEGTVRDLLSSITKDFYTHPYFKTE----IAKPLQIEQILDREVPELSGGELQRV 124

Query: 168 EIARSLVSFPSYILLDEPFAGVDPVAISDIHVLIRDLASRGI---------GILITDHNV 218
            IA  L       LLDEP A +D        V  R +AS+ I            + +H++
Sbjct: 125 AIAACLSKDADIYLLDEPSAYLD--------VEQRLMASKVIRRFAENNEKTAFVVEHDI 176

Query: 219 HEILTLIDR 227
             I  L DR
Sbjct: 177 IMIDYLADR 185