RPSBLAST alignment for GI: 254780744 and conserved domain: cd03298
>gnl|CDD|73057 cd03298, ABC_ThiQ_thiamine_transporter, ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 211
Score = 116 bits (293), Expect = 5e-27
Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 4/197 (2%)
Query: 45 DLYVKPGEIVGLLGPNGAGKTTFFYMMTGLICADSGSIKIDGNDITKMPMYRRARLGISY 104
DL GEI ++GP+G+GK+T ++ G SG + I+G D+T P R +S
Sbjct: 18 DLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRP---VSM 74
Query: 105 LPQEASIFRGLTVEENILAVLEVYEKDKKKRHEKLDSLLKEFNITKWRHVLAPLLSGGQR 164
L QE ++F LTVE+N+ L K + + ++ L + L LSGG+R
Sbjct: 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLPGELSGGER 134
Query: 165 RRLEIARSLVSFPSYILLDEPFAGVDPVAISDIHVLIRDL-ASRGIGILITDHNVHEILT 223
+R+ +AR LV +LLDEPFA +DP +++ L+ DL A + +L+ H +
Sbjct: 135 QRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKR 194
Query: 224 LIDRAYIIHAGGVLAHG 240
L R + G + A G
Sbjct: 195 LAQRVVFLDNGRIAAQG 211