HHsearch alignment for GI: 254780745 and conserved domain: COG1934
>COG1934 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=100.00 E-value=3.7e-32 Score=192.76 Aligned_cols=140 Identities=23% Similarity=0.261 Sum_probs=119.6
Q ss_pred HCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCEEEEEECCCC----C
Q ss_conf 000122445777847999116999923887999800899978759999689999617665444200122201222----0
Q gi|254780745|r 31 ASYMTRFKVLGNEKIHIKADMLEVKDAVQKAFFKGNVFMTQEDFSLQADKMTIDYNNTNRDVSNKINRMDVERNI----F 106 (181)
Q Consensus 31 ~~~~~~~~~d~~~Pi~I~AD~~~~d~~~~~~~~~GNV~i~qg~~~i~aD~l~i~~~~~~~~~~~~i~~~~a~gnv----~ 106 (181)
T Consensus 19 ~~~a~al~~d~~qPi~i~ad~~el~~~~~~a~ftGNV~i~qG~~~l~Adkv~v~~~~~~~~-----~~i~a~gn~~~~~q 93 (173)
T COG1934 19 SSPAFALKGDRDQPITIEADQQELDDKNGVATFTGNVVVTQGTITLRADKVTVTRDKEGGK-----EVIEANGNPATFSQ 93 (173)
T ss_pred CCHHHHCCCCCCCCEEEECCCEEEECCCCEEEEECCEEEEECCCEEEEEEEEEECCCCCCC-----EEEEEECCEEEEEE
T ss_conf 0102322356558779972522430668779997638998466179713699980578985-----48999546667887
Q ss_pred CC--CCCCCEEEEEEEEECCCCEEEEEECCCCEEEEEECCCEEEEEEEEEEECCCEEEEEECCCCEEEEEEECCC
Q ss_conf 24--55653321127994166589999478634999717976992299999216589999289980999981187
Q gi|254780745|r 107 IQ--SGEINVIASNGYVDFQKRILVLNGDRADKVILKEKLNTFLGCKLIVNIDTSFASLQGCESDQVQSIIRYDG 179 (181)
Q Consensus 107 ~~--~~~~~~~a~~~~y~~~~~~~~l~Gna~~~v~l~q~~~~i~gdki~yn~~tg~~~~~g~~~~rV~~i~~~~~ 179 (181)
T Consensus 94 ~~~~~k~~~g~ad~~~Y~~~~~~~vLtGna~----v~q~gn~i~G~kIty~~~~~~~~a~~~~~~RV~~V~~p~~ 164 (173)
T COG1934 94 KVDNGKTQKGTADQAIYDLKNDTIVLTGNAY----VLQLGNVIRGDKITYLTKTGRAVAESSKGGRVRTVLDPED 164 (173)
T ss_pred EECCCCCEEEEEEEEEEEECCCEEEEECCEE----EEECCCEEEEEEEEEECCCCEEEECCCCCCCEEEEECCHH
T ss_conf 6507850388851699982078999947799----9857988876399999434579962889984799988055