HHsearch alignment for GI: 254780745 and conserved domain: COG1934

Probab=98.44  E-value=1.1e-05  Score=49.19  Aligned_cols=87  Identities=15%  Similarity=0.080  Sum_probs=68.1

Q ss_pred             CEEEEEEEEEEEC--CCC--EEEEEEE----EEEEEC--CEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCC
Q ss_conf             4799911699992--388--7999800----899978--75999968999961766544420012220122202455653
Q gi|254780745|r   44 KIHIKADMLEVKD--AVQ--KAFFKGN----VFMTQE--DFSLQADKMTIDYNNTNRDVSNKINRMDVERNIFIQSGEIN  113 (181)
Q Consensus        44 Pi~I~AD~~~~d~--~~~--~~~~~GN----V~i~qg--~~~i~aD~l~i~~~~~~~~~~~~i~~~~a~gnv~~~~~~~~  113 (181)
T Consensus        61 ~~~l~Adkv~v~~~~~~~~~~i~a~gn~~~~~q~~~~~k~~~g~ad~~~Y~~~~~---------~~vLtGna~v~q~gn~  131 (173)
T COG1934          61 TITLRADKVTVTRDKEGGKEVIEANGNPATFSQKVDNGKTQKGTADQAIYDLKND---------TIVLTGNAYVLQLGNV  131 (173)
T ss_pred             CCEEEEEEEEEECCCCCCCEEEEEECCEEEEEEEECCCCCEEEEEEEEEEEECCC---------EEEEECCEEEEECCCE
T ss_conf             6179713699980578985489995466678876507850388851699982078---------9999477999857988


Q ss_pred             EEEEEEEEECCCCEEEEEECCCCEEE
Q ss_conf             32112799416658999947863499
Q gi|254780745|r  114 VIASNGYVDFQKRILVLNGDRADKVI  139 (181)
Q Consensus       114 ~~a~~~~y~~~~~~~~l~Gna~~~v~  139 (181)
T Consensus       132 i~G~kIty~~~~~~~~a~~~~~~RV~  157 (173)
T COG1934         132 IRGDKITYLTKTGRAVAESSKGGRVR  157 (173)
T ss_pred             EEEEEEEEECCCCEEEECCCCCCCEE
T ss_conf             87639999943457996288998479