HHsearch alignment for GI: 254780745 and conserved domain: COG3117
>COG3117 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=94.42 E-value=0.081 Score=28.31 Aligned_cols=109 Identities=16% Similarity=0.134 Sum_probs=60.6
Q ss_pred CCCCCCCCEEEEEEEEE---EECCCCEEEEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 44577784799911699---992388799980089997875999968999961766544420012220122202455653
Q gi|254780745|r 37 FKVLGNEKIHIKADMLE---VKDAVQKAFFKGNVFMTQEDFSLQADKMTIDYNNTNRDVSNKINRMDVERNIFIQSGEIN 113 (181)
Q Consensus 37 ~~~d~~~Pi~I~AD~~~---~d~~~~~~~~~GNV~i~qg~~~i~aD~l~i~~~~~~~~~~~~i~~~~a~gnv~~~~~~~~ 113 (181)
T Consensus 33 v~~~~d~p~-Y~~e~~~~~~~de-~G~~-----------~y~l~a~~~eh~~~~~~t~ft~P~l~lf~e-----~~q~w~ 94 (188)
T COG3117 33 VRPNPDEPA-YTMEGLDTTVYDE-QGKL-----------KYRLTAQHVEHYSDSSDTHFTAPVLTLFRE-----NRQTWT 94 (188)
T ss_pred CCCCCCCCC-EEECCCCEEEECC-CCCE-----------EEEEEHHHHHHCCCCCCEEEECCEEEEECC-----CCCCEE
T ss_conf 104999864-0205742367777-7605-----------677632345415456655771535998838-----876279
Q ss_pred EEEEEEEEECCCCEEEEEECCCCEEEEEE--CCCEEEEEEEEEEECCCEEEEE
Q ss_conf 32112799416658999947863499971--7976992299999216589999
Q gi|254780745|r 114 VIASNGYVDFQKRILVLNGDRADKVILKE--KLNTFLGCKLIVNIDTSFASLQ 164 (181)
Q Consensus 114 ~~a~~~~y~~~~~~~~l~Gna~~~v~l~q--~~~~i~gdki~yn~~tg~~~~~ 164 (181)
T Consensus 95 v~Ad~a~l~~-d~~l~l~~~vvv~~~t~d~~q~~~l~T~~~~V~l~tqd~~te 146 (188)
T COG3117 95 VQADRAKLTK-DGKLYLLGDVVVVALTPDSGQLQRLTTESAQVNLKTQDAQTE 146 (188)
T ss_pred EEHHHHEECC-CCEEEEEECEEEEEECCCCCCCCEEEEEEEEECCCCCCEECC
T ss_conf 9810202157-855998712067751477667645871023761331000037